EWM23792.1, cds6881 (CDS) Nannochloropsis gaditana

Overview
NameEWM23792.1
Unique Namecds6881
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:746138..746383 +
Alignment locationCM002469.1:746557..747554 +
Alignment locationCM002469.1:747695..747886 +
Alignment locationCM002469.1:748115..748205 +

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Properties
Property NameValue
Protein idEWM23792.1
Productprotein of unknown function DUF2439
Orig transcript idgnl|cribi|Naga_100537g2.2044.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:746138..746383 +
CM002469.1supercontigCM002469.1:746557..747554 +
CM002469.1supercontigCM002469.1:747695..747886 +
CM002469.1supercontigCM002469.1:748115..748205 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR018838DUF2439
Homology
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BLAST of EWM23792.1 vs. NCBI_GenBank
Match: gi|585105024|gb|EWM23792.1| (protein of unknown function DUF2439 [Nannochloropsis gaditana])

HSP 1 Score: 1019.22 bits (2634), Expect = 0.000e+0
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0 
Query:    1 MRAVPNLLSLFERVRYYFTLIPPFFLPPSPPTHAGSLSTARVMERRTCLYTRRLTQRQKKWQDGFLFLNRSSGKVHIKSENGEATIHSALLKPIEVADWAEGDEITVEGMLLVSVGEVLEENGAARQGQFGELPDSCHFTATRVPVHAFATHLSSVSPLPSTSMSSLTGIQRCFLRPRAPLRVFPEEESTGTTRPRFVSPVMQRPPSGDVVMPTRDLPQEERAIGGREEGEMGEGIDTAGDRARSVLGTRSVLPHRIRSKFVGRGLGWNIEGGTEGRKGGETEKQGNGRREDADGKQSLPSHSPPQRLAGGAVPSAVASGTRSPPSSRVLQSNVPSSISAPSVFSFPPSSSCARPPPAFLPPSSATSSSSSSSSSSSFSSPYSVLSPSSSAFFRASTTCLEFMTPAVRARWPVLRHVILPTSYPSSADYVDALLAATTEEINLSLAELASRFLMAWQGRQRGTGGGRGGGRGAAEGATSMEALRRAGGVCYYSDVELIVSRKRKEGDE 508
            MRAVPNLLSLFERVRYYFTLIPPFFLPPSPPTHAGSLSTARVMERRTCLYTRRLTQRQKKWQDGFLFLNRSSGKVHIKSENGEATIHSALLKPIEVADWAEGDEITVEGMLLVSVGEVLEENGAARQGQFGELPDSCHFTATRVPVHAFATHLSSVSPLPSTSMSSLTGIQRCFLRPRAPLRVFPEEESTGTTRPRFVSPVMQRPPSGDVVMPTRDLPQEERAIGGREEGEMGEGIDTAGDRARSVLGTRSVLPHRIRSKFVGRGLGWNIEGGTEGRKGGETEKQGNGRREDADGKQSLPSHSPPQRLAGGAVPSAVASGTRSPPSSRVLQSNVPSSISAPSVFSFPPSSSCARPPPAFLPPSSATSSSSSSSSSSSFSSPYSVLSPSSSAFFRASTTCLEFMTPAVRARWPVLRHVILPTSYPSSADYVDALLAATTEEINLSLAELASRFLMAWQGRQRGTGGGRGGGRGAAEGATSMEALRRAGGVCYYSDVELIVSRKRKEGDE
Sbjct:    1 MRAVPNLLSLFERVRYYFTLIPPFFLPPSPPTHAGSLSTARVMERRTCLYTRRLTQRQKKWQDGFLFLNRSSGKVHIKSENGEATIHSALLKPIEVADWAEGDEITVEGMLLVSVGEVLEENGAARQGQFGELPDSCHFTATRVPVHAFATHLSSVSPLPSTSMSSLTGIQRCFLRPRAPLRVFPEEESTGTTRPRFVSPVMQRPPSGDVVMPTRDLPQEERAIGGREEGEMGEGIDTAGDRARSVLGTRSVLPHRIRSKFVGRGLGWNIEGGTEGRKGGETEKQGNGRREDADGKQSLPSHSPPQRLAGGAVPSAVASGTRSPPSSRVLQSNVPSSISAPSVFSFPPSSSCARPPPAFLPPSSATSSSSSSSSSSSFSSPYSVLSPSSSAFFRASTTCLEFMTPAVRARWPVLRHVILPTSYPSSADYVDALLAATTEEINLSLAELASRFLMAWQGRQRGTGGGRGGGRGAAEGATSMEALRRAGGVCYYSDVELIVSRKRKEGDE 508
The following BLAST results are available for this feature:
BLAST of EWM23792.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105024|gb|EWM23792.1|0.000e+0100.00protein of unknown function DUF2439 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6897rna6897Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications