EWM23798.1, cds6875 (CDS) Nannochloropsis gaditana

Overview
NameEWM23798.1
Unique Namecds6875
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:728095..728565 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23798.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102479g1.8316.mrna
GbkeyCDS
End range.
End range728565
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:728095..728565 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
[Close]
BLAST of EWM23798.1 vs. NCBI_GenBank
Match: gi|585105036|gb|EWM23798.1| (hypothetical protein Naga_102479g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 288.5 bits (737), Expect = 3.447e-98
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 AVVLLFPLPPPSSSSSSSSSSSSSSSSPPASSTTALLESSLLPVLALRPPVPSLLLLLSQHLPFLLAHTTRPFFLSTVLPPCLLLPLEIDLPPLQDQALKHLADPHIHAVLGHARMLEEVLPRLGRLLVQTPHVSLRVNGLVCLAKTLPCYRKKVR 156
            AVVLLFPLPPPSSSSSSSSSSSSSSSSPPASSTTALLESSLLPVLALRPPVPSLLLLLSQHLPFLLAHTTRPFFLSTVLPPCLLLPLEIDLPPLQDQALKHLADPHIHAVLGHARMLEEVLPRLGRLLVQTPHVSLRVNGLVCLAKTLPCYRKKVR
Sbjct:    1 AVVLLFPLPPPSSSSSSSSSSSSSSSSPPASSTTALLESSLLPVLALRPPVPSLLLLLSQHLPFLLAHTTRPFFLSTVLPPCLLLPLEIDLPPLQDQALKHLADPHIHAVLGHARMLEEVLPRLGRLLVQTPHVSLRVNGLVCLAKTLPCYRKKVR 156
[Close]
BLAST of EWM23798.1 vs. NCBI_GenBank
Match: gi|553188873|ref|XP_005854885.1| (protein kinase [Nannochloropsis gaditana CCMP526] >gi|422294175|gb|EKU21475.1| protein kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 84.3445 bits (207), Expect = 1.124e-18
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0 
Query:  116 MLEEVLPRLGRLLVQTPHVSLRVNGLVCLAKTLPCYRKKV 155
            MLEEVLPRLGRLLVQTPHVSLRVNGLVCLAKTLPCYRKKV
Sbjct:    1 MLEEVLPRLGRLLVQTPHVSLRVNGLVCLAKTLPCYRKKV 40
The following BLAST results are available for this feature:
BLAST of EWM23798.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585105036|gb|EWM23798.1|3.447e-98100.00hypothetical protein Naga_102479g1, partial [Nanno... [more]
gi|553188873|ref|XP_005854885.1|1.124e-18100.00protein kinase [Nannochloropsis gaditana CCMP526] ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6891rna6891Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications