EWM23807.1, cds6867 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23807.1 vs. NCBI_GenBank
Match: gi|585105050|gb|EWM23807.1| (hypothetical protein Naga_101274g2 [Nannochloropsis gaditana] >gi|585105051|gb|EWM23808.1| hypothetical protein Naga_101274g2 [Nannochloropsis gaditana] >gi|585105052|gb|EWM23809.1| hypothetical protein Naga_101274g2 [Nannochloropsis gaditana]) HSP 1 Score: 268.855 bits (686), Expect = 4.065e-91 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
Query: 1 MPRSFTFIALCLTVSATFGFLLPTPSLVPTPSCGRGRTFRSPFFSSSTFASSPLVLQAAADDSDENGQKKKITEPARREMPPPTPLSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 133
MPRSFTFIALCLTVSATFGFLLPTPSLVPTPSCGRGRTFRSPFFSSSTFASSPLVLQAAADDSDENGQKKKITEPARREMPPPTPLSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY
Sbjct: 1 MPRSFTFIALCLTVSATFGFLLPTPSLVPTPSCGRGRTFRSPFFSSSTFASSPLVLQAAADDSDENGQKKKITEPARREMPPPTPLSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 133
BLAST of EWM23807.1 vs. NCBI_GenBank
Match: gi|298710214|emb|CBJ26289.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.9366 bits (167), Expect = 3.002e-12 Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0
Query: 47 STFASSPLVLQAAADDSDENGQKKKITE---PARR--EMPPPTPLSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 133
+ A S ++ A+D +DE +TE PA R +MPP +S++M+++L E QGAD N S GNPIL++A +I VLV++GG+G FY
Sbjct: 57 ESAAESEAEIRPASDKADE------VTETPVPAVRPEDMPPKQKISNDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 142
BLAST of EWM23807.1 vs. NCBI_GenBank
Match: gi|873218080|emb|CEM40098.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 62.003 bits (149), Expect = 1.604e-9 Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query: 86 LSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 133
+S +M+++LL E GQGA+ N S GNP L+I V+I LV+LGGKG FY
Sbjct: 105 ISPDMKKRLLRELEGQGANPNKSRGNPYLIIFVIIAALVILGGKGIFY 152 The following BLAST results are available for this feature:
BLAST of EWM23807.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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