EWM23819.1, cds6855 (CDS) Nannochloropsis gaditana

Overview
NameEWM23819.1
Unique Namecds6855
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:688873..688919 -
Alignment locationCM002469.1:688541..688715 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23819.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101113g1.2224.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:688873..688919 -
CM002469.1supercontigCM002469.1:688541..688715 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM23819.1 vs. NCBI_GenBank
Match: gi|585105072|gb|EWM23819.1| (hypothetical protein Naga_101113g1 [Nannochloropsis gaditana])

HSP 1 Score: 142.51 bits (358), Expect = 4.524e-43
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MGRGGFDGATACMDRERLLPASACLSLDVSSRVRLVAGLPVAAVFLSDLSDICPVGMVGRKKRKTRKIRAKVK 73
            MGRGGFDGATACMDRERLLPASACLSLDVSSRVRLVAGLPVAAVFLSDLSDICPVGMVGRKKRKTRKIRAKVK
Sbjct:    1 MGRGGFDGATACMDRERLLPASACLSLDVSSRVRLVAGLPVAAVFLSDLSDICPVGMVGRKKRKTRKIRAKVK 73
The following BLAST results are available for this feature:
BLAST of EWM23819.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105072|gb|EWM23819.1|4.524e-43100.00hypothetical protein Naga_101113g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6871rna6871Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications