EWM23825.1, cds6848 (CDS) Nannochloropsis gaditana

Overview
NameEWM23825.1
Unique Namecds6848
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:673319..673768 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23825.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101133g3.10295.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:673319..673768 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23825.1 vs. NCBI_GenBank
Match: gi|585105082|gb|EWM23825.1| (hypothetical protein Naga_101133g3 [Nannochloropsis gaditana])

HSP 1 Score: 280.796 bits (717), Expect = 2.188e-95
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 
Query:    1 MFLLPSSSQSPVFLGRPSGGASDAESPRRAFKHGWRTAAGGKGGACQPPQLHFVAKPIGPIGVVGVGVSARRWGSGWRREGGGREGVDMKGGRGGGEERCERKGQEGRKGGKERCEKEGGEGRNAGEEKELREPLEGRVESAGGGGARK 149
            MFLLPSSSQSPVFLGRPSGGASDAESPRRAFKHGWRTAAGGKGGACQPPQLHFVAKPIGPIGVVGVGVSARRWGSGWRREGGGREGVDMKGGRGGGEERCERKGQEGRKGGKERCEKEGGEGRNAGEEKELREPLEGRVESAGGGGARK
Sbjct:    1 MFLLPSSSQSPVFLGRPSGGASDAESPRRAFKHGWRTAAGGKGGACQPPQLHFVAKPIGPIGVVGVGVSARRWGSGWRREGGGREGVDMKGGRGGGEERCERKGQEGRKGGKERCEKEGGEGRNAGEEKELREPLEGRVESAGGGGARK 149
The following BLAST results are available for this feature:
BLAST of EWM23825.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105082|gb|EWM23825.1|2.188e-95100.00hypothetical protein Naga_101133g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6864rna6864Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications