EWM23842.1, cds6835 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|553187407|ref|XP_005854605.1| (glutathione peroxidase [Nannochloropsis gaditana CCMP526] >gi|422294457|gb|EKU21757.1| glutathione peroxidase [Nannochloropsis gaditana CCMP526] >gi|585105110|gb|EWM23842.1| glutathione peroxidase [Nannochloropsis gaditana]) HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query: 1 MRQQLHRPAPRRSSRLLLLLALVLGASYSNAFVSSPLLKKLAPLAHKQRCRMSAPQEEGSSSTDLHTAQSSLSLNRADLLKRTLRAASSFSLVWLTGQREADAGEEGAPDASVEVAKESAQPAPVSPPATAPGPLKTAYDYAVPYDGVRVPLGNFRGKAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYYEPLGEDQRSLP 344
MRQQLHRPAPRRSSRLLLLLALVLGASYSNAFVSSPLLKKLAPLAHKQRCRMSAPQEEGSSSTDLHTAQSSLSLNRADLLKRTLRAASSFSLVWLTGQREADAGEEGAPDASVEVAKESAQPAPVSPPATAPGPLKTAYDYAVPYDGVRVPLGNFRGKAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYYEPLGEDQRSLP
Sbjct: 1 MRQQLHRPAPRRSSRLLLLLALVLGASYSNAFVSSPLLKKLAPLAHKQRCRMSAPQEEGSSSTDLHTAQSSLSLNRADLLKRTLRAASSFSLVWLTGQREADAGEEGAPDASVEVAKESAQPAPVSPPATAPGPLKTAYDYAVPYDGVRVPLGNFRGKAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYYEPLGEDQRSLP 344
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|298713045|emb|CBJ48820.1| (Glutathione peroxidase [Ectocarpus siliculosus]) HSP 1 Score: 249.21 bits (635), Expect = 9.041e-78 Identity = 120/194 (61.86%), Postives = 145/194 (74.74%), Query Frame = 0
Query: 141 YAVPYDGVRVPLGNFRG-KAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYY 333
+ VPY G VPL F G +A +V N K DDPE+L Q+PG+T L +YSK GL V +F T+QGTFE DEDRVIRIK+YQ YGFGQYP ++VFDKIDIVG PFY++LC+ L+NPN IARITLN+EKFLLD +G+ VRRYPR+ A D E DVKAV+AG+PLP + +W A EA +SEYAFK GLNYY
Sbjct: 95 FEVPYTGKSVPLNKFLGSRATLVVNGKLDDPEALHQMPGITKLASEYSKDGLNVLLFPTDQGTFEADEDRVIRIKFYQFYGFGQYPKAVVFDKIDIVGNTIHPFYRYLCRALKNPNGIARITLNYEKFLLDQDGKVVRRYPRKLEAADFEADVKAVIAGDPLPAENRDYKLSWLKADQEATKSEYAFKLGLNYY 288
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|551661343|ref|XP_005833438.1| (hypothetical protein GUITHDRAFT_152358 [Guillardia theta CCMP2712] >gi|428177579|gb|EKX46458.1| hypothetical protein GUITHDRAFT_152358 [Guillardia theta CCMP2712]) HSP 1 Score: 190.66 bits (483), Expect = 3.081e-55 Identity = 96/198 (48.48%), Postives = 130/198 (65.66%), Query Frame = 0
Query: 140 DYAVPYDGVRVPLGNFRG-KAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNS--LVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYYE 334
D +P +G + L +G KA +V N K DDPE++ QIP L L +Y+ +GL F T+QG +E D+ +RIK QQYG +V DK DIVGK P Y+++ L NPN I RITLN+EKFLLDA+G+ +RRYPR ++A ME+DVKAVLAG+PLPP P+ + AW++A EA RS Y+F+K N+Y+
Sbjct: 30 DIPIPVNGKQKTLSKLKGSKATIVMNIKLDDPETVTQIPALKTLVLQYADQGLNAICFPTDQGDYEPDDSATVRIKVAQQYGMKSSLKGPIIVTDKTDIVGKFTHPLYRYMTTNLPNPNNITRITLNYEKFLLDADGQVLRRYPRLWSAERMEKDVKAVLAGQPLPPVDPQWLFAWKEADKEATRSIYSFRKHYNFYD 227
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|551561960|ref|XP_005767789.1| (glutathione peroxidase [Emiliania huxleyi CCMP1516] >gi|485618335|gb|EOD15360.1| glutathione peroxidase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 184.882 bits (468), Expect = 8.872e-53 Identity = 97/192 (50.52%), Postives = 131/192 (68.23%), Query Frame = 0
Query: 141 YAVPYDGVRVPLGNFRGKAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNY 332
+ VP+ G P+ F G+A +V N K DDP +L Q+PGL L +Y+ +GL V F T+QG FE D+ +R+K+ Y FGQYP ++VFDK D++G A PFY +L +++ NP + R+ ++EKFLL +G P+RRYPR+Y +ME D++AVLAG PLPPPSP L KAW DA EA +SEYAFK G NY
Sbjct: 90 FDVPFRGEPTPIKPFLGRASIVVNVKFDDPATLDQLPGLQALYARYNAEGLHVLAFPTDQGWFEADDSNTLRLKFKSVYDFGQYPAAVVFDKADLLGGNALPFYSWLTRSMSNPWGVQRLVFDYEKFLLAPDGTPLRRYPRKYPPQNMEADIEAVLAGRPLPPPSPALAKAWEDAKREAVKSEYAFKPGYNY 281
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|922857606|gb|KOO25831.1| (glutathione peroxidase, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 187.193 bits (474), Expect = 2.578e-51 Identity = 85/171 (49.71%), Postives = 117/171 (68.42%), Query Frame = 0
Query: 161 VVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLN 331
++ N K DDPE+L Q+P + + +YS++GL V F T+QG FE D+ +R+KY YGFGQYP ++VFDK D++G A P Y ++ TL NP + R+ N+EKFL+D G+P RRYPR++ M+ DV+A+L G+PLPPPS L KAW DA EA +SEY+FK GL
Sbjct: 59 LLVNVKFDDPETLDQMPAIGDMVSRYSERGLHVLAFPTDQGWFEADDSNTLRLKYKSVYGFGQYPTAVVFDKTDLLGGNALPLYTWMTTTLSNPWGVNRLVFNYEKFLVDDRGQPRRRYPRKFPIQLMDADVQALLNGQPLPPPSASLEKAWEDAKREAVKSEYSFKPGLG 229
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|873228613|emb|CEM15555.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 169.088 bits (427), Expect = 2.930e-46 Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 0
Query: 143 VPYDGVRVPLGNFRGK-AVVVCNAKTDDPESLAQIPGLTYLTGKYSKKGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNP---NKIARITLNFEKFLLDANGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYY 333
+P +P+ F G+ A +V N K DDPES QI L YL KY K+GL V +F T QG E D D +RI+ YQ +GFGQYP ++ FDK+D++G +A P Y +L + LRNP I+LN+EKFLLD +G PVRRYPR++ ++E D++A+L G L PS + AW A E ++ YA+++ NY+
Sbjct: 129 IPLRKKSIPIEKFLGRRATLVVNIKLDDPES-RQIGELKYLVDKYWKQGLTVMMFPTLQGWAEPDTDDTLRIRVYQTFGFGQYPQAVCFDKVDVIGPQAHPLYTYLGRQLRNPIAGKSWENISLNYEKFLLDGDGVPVRRYPRQWDPLEIEYDLRALLDGRQLGAPSKEFQLAWLKAERERKKDTYAYRENYNYF 322
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|1210529258|dbj|GAX12100.1| (hypothetical protein FisN_15Lh208 [Fistulifera solaris]) HSP 1 Score: 167.933 bits (424), Expect = 8.296e-46 Identity = 119/315 (37.78%), Postives = 169/315 (53.65%), Query Frame = 0
Query: 41 LAPLAHKQRCRMSAPQEEGSSSTDLHTAQSSLSLNRADLLKRTLRAASSFSLVWLTGQREADAGEEG-------APDASVEVAKESAQPAPVSPPATAPGPLKTAYDYAVPYDGVRVPL-----------GNFRGKAVVVCNAKTDDPESLAQIPGLTYLTGKYSK--KGLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDA-NGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYYE 334
LA LA + R A + S+ + HT Q SLS N + +R + W A A EE A S ++ KE+AQ A T KTAYD+++P +G P G+ R KA++V N K DDP + IP L L KY + L+V V ++QG +E D ++IR+K +YG+G P+++V DK++ +G A PF+++L + R P + R+ NFEKFLLD G P+RRYPR+Y +ME+D+ AVL G+PLPPP + WR A EA+R Y F+KGLNYY+
Sbjct: 9 LAVLALATKVR--AFRTAVSTRSQRHTVQLSLSQNGSSEQRRAILRQLLTVGGWTVLTPSALADEESFAAISARANQISQDMNKEAAQVA-----VTQRSNDKTAYDFSLPMEGKNTPFKDIIGQSITESGDARVKAILVVNLKQDDPIARKTIPELIALATKYGRDTSALRVIVSPSDQGYYEPDTSQLIRLKLASEYGYGINPSTIVTDKVNFLGTGAHPFWRWLQASCRTPAGLGRLEGNFEKFLLDGRTGLPLRRYPRKYKPLNMEDDIAAVLNGKPLPPPRANWQEEWRAAAAEADRDTYRFQKGLNYYD 316
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|1072226829|gb|OEU11570.1| (hypothetical protein FRACYDRAFT_192183 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 164.466 bits (415), Expect = 6.921e-45 Identity = 83/213 (38.97%), Postives = 125/213 (58.69%), Query Frame = 0
Query: 136 KTAYDYAVPYDGVRVPL------------GNFRGKAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKG-LKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDA-NGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYYE 334
+TAYD+ +P G +P G + K ++V N K DDP + IP + L KY + G V + T+QG +E D ++IR+K +YG+G P +++ DK++++GK A PF+++L R P + R+ NFEKFL+D G P+RRYPR+Y ++ D++A++AG PLPP + WR A VEAE Y F+KGLNYY+
Sbjct: 72 RTAYDFEIPISGNSIPFKDIIHQEIDPETGFSKCKCILVSNMKEDDPIARKDIPEMISLASKYGRDGQFAVILSPTDQGYYEPDTSQLIRLKLASEYGYGINPATILTDKVNMLGKTALPFWRWLQSNCRTPAGLGRVEGNFEKFLVDGRTGLPLRRYPRKYKPSAIKNDIEAIIAGRPLPPAGANFREEWRSAAVEAEAGTYRFQKGLNYYD 284
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|223998094|ref|XP_002288720.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975828|gb|EED94156.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 163.696 bits (413), Expect = 6.240e-44 Identity = 83/214 (38.79%), Postives = 123/214 (57.48%), Query Frame = 0
Query: 136 KTAYDYAVPYDGVRVPLGNFRG-------------KAVVVCNAKTDDPESLAQIPGLTYLTGKYSKKG-LKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDA-NGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYYE 334
+T YD+ +P GV +G G KA++V N K DDP + IP L L K+ K G V V T+QG +E D +IR+K +YG+G P +++ DK++++G A PF++++ + R P + +I NFEKFL+D G+ +RRYPR+Y YD+ +D+ AV+ G PLPP + WR A EAE Y F+KGLNY++
Sbjct: 137 RTIYDFKLPIGGVEKSVGELVGQEFESENGLGEKVKAILVVNIKQDDPIARKNIPELIALASKFGKNGEFAVIVSPTDQGYYEPDTSALIRLKMASEYGYGSTPGTILTDKVNLLGSGALPFWRWIEGSCRTPAGLGKIQANFEKFLVDGRTGKAIRRYPRKYQPYDIADDIAAVVQGRPLPPAQMNFKEEWRTAAKEAEADTYRFQKGLNYFD 350
BLAST of EWM23842.1 vs. NCBI_GenBank
Match: gi|1210528532|dbj|GAX12729.1| (hypothetical protein FisN_15Hh208 [Fistulifera solaris]) HSP 1 Score: 160.999 bits (406), Expect = 3.013e-43 Identity = 99/241 (41.08%), Postives = 142/241 (58.92%), Query Frame = 0
Query: 108 APDASVEVAKESAQPAPVSPPATAPGPLKTAYDYAVPYDGVRVPL-----------GNFRGKAVVVCNAKTDDPESLAQIPGLTYLTGKYSKK--GLKVWVFTTEQGTFETDEDRVIRIKYYQQYGFGQYPNSLVFDKIDIVGKRADPFYKFLCKTLRNPNKIARITLNFEKFLLDA-NGRPVRRYPRRYTAYDMEEDVKAVLAGEPLPPPSPKLIKAWRDAYVEAERSEYAFKKGLNYYE 334
A S ++ KE+AQ A T KTAYD+++P +G P G+ R KA++V N K DDP + IP L L KY + L+V V ++QG +E D ++IR+K +YG+G P+++V DK++ +G A PF+++L + R P + R+ NFEKFLLD G P+RRYPR+Y +ME+D+ AVL G+PLPPP + WR A EA+R Y F+KGLNYY+
Sbjct: 79 ANQISQDMNKEAAQVA-----ITQRSNDKTAYDFSLPMEGKNTPFKDIIGQSMTESGDARVKAILVVNLKQDDPIARKTIPELIALATKYGRDTGALRVIVSPSDQGYYEPDTSQLIRLKLASEYGYGINPSTIVTDKVNFLGTGAHPFWRWLQASCRTPAGLGRLEGNFEKFLLDGRTGLPLRRYPRKYKPLNMEDDIAAVLNGKPLPPPRANWQEEWRAAAAEADRDTYRFQKGLNYYD 314 The following BLAST results are available for this feature:
BLAST of EWM23842.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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