EWM23837.1, cds6834 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|585105105|gb|EWM23837.1| (peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0 Query: 1 MGSVLRLSLLALYFPSLLSIVSCFYTQFSSTRPRRTFQRAASSSSMSSAASPSSLAHSSLSTSSSSSMDASTLCPPSPDSDTNKWDSSKTRRDVLAPMTLSLLLLSSSTLSHPVSTLASSPPSPSSSPALDPSFLPSNARVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSASYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGTFEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDIVASKTLFAAAGKGFDPRAKIIYLNKPLQKIVVTAVGML 350 MGSVLRLSLLALYFPSLLSIVSCFYTQFSSTRPRRTFQRAASSSSMSSAASPSSLAHSSLSTSSSSSMDASTLCPPSPDSDTNKWDSSKTRRDVLAPMTLSLLLLSSSTLSHPVSTLASSPPSPSSSPALDPSFLPSNARVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSASYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGTFEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDIVASKTLFAAAGKGFDPRAKIIYLNKPLQKIVVTAVGML Sbjct: 1 MGSVLRLSLLALYFPSLLSIVSCFYTQFSSTRPRRTFQRAASSSSMSSAASPSSLAHSSLSTSSSSSMDASTLCPPSPDSDTNKWDSSKTRRDVLAPMTLSLLLLSSSTLSHPVSTLASSPPSPSSSPALDPSFLPSNARVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSASYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGTFEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDIVASKTLFAAAGKGFDPRAKIIYLNKPLQKIVVTAVGML 350
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|873228959|emb|CEM14588.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 108.612 bits (270), Expect = 3.161e-24 Identity = 72/244 (29.51%), Postives = 129/244 (52.87%), Query Frame = 0 Query: 114 VSTLASSPPSPSSSPALDPSFLPSNARVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSA-SYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIK-TENAADWTRNTEVNGLKHAEPFLLTMVRGGGTFEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVK-VSTDDIVASKTLFAAAGKGF-DPRAK---IIYLNKPLQKIVVTAVGML 350 V PP+P+++P R++D+ + D+ + G G + +G++G++AP +V F ++ SY YS++ +V + +G++ G G K++ ++I+E+G +R+ T+ A T NT+ H+ L+++ RGGGTFEF VT P+P LDRD++V G++L V+ ++ RVK + +D+ + F + K DPRA Y P+ K++ VG+L Sbjct: 10 VHAAEEGPPTPATAP-----------RISDRCYLDMELNGKLLGRVVVGLWGEEAPTSVQTFAQLCGKTYPGGLSYAYSAMSKVFPNQLVVLGKITGDGTKKVDKKIDETGRVRVTYTDRATYETANTDSPSTSHSSEGLVSVRRGGGTFEFGVTLQPMPDLDRDYIVIGQVL---------EGMDVIKRLSRVKYIPPEDL---REAFRSVAKAIGDPRASGGGDAY--SPVAKVITKNVGLL 228
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|922855594|gb|KOO24030.1| (peptidyl-prolyl cis-trans isomerase cyp20- chloroplastic-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 92.8189 bits (229), Expect = 2.333e-18 Identity = 67/215 (31.16%), Postives = 113/215 (52.56%), Query Frame = 0 Query: 136 PSNARVTDKVFFDISIAGVPAG--TLSMGVFGDQAPVTVGNFLKVLNGQ--GQSA-SYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGTFEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDIVASKTLFAAAGKGF-DPRAKIIYLNKPLQKIVV 344 P RVT + I++ A L + +FGD+AP +V F V +G GQ+ +Y +++ RV I G V G G+ ++R I+ +G +R + AD +N++ N L+H P ++M +GGG F ++ A ALD ++V G++LM +E S +++ +I V V A +++ A GK DPR K+ + +PL+KI + Sbjct: 16 PVKERVTAEAALTIAVGTTDAARRVLPIALFGDEAPGSVATFRGVCDGTLPGQAGVTYRGTTISRVERDRVIQAG-VASGSGQDVERSIDSTGYVRSVYVSRADAFKNSDTNELRHDRPGRVSMQKGGGDFRLTIAPAENRALDETNIVIGQVLMLDTAEESPST-SLLREINEVPVRQPK--AETSIYLALGKAAGDPRTKVETVYRPLRKISI 226
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|551615378|ref|XP_005788569.1| (hypothetical protein EMIHUDRAFT_226708 [Emiliania huxleyi CCMP1516] >gi|485642033|gb|EOD36140.1| hypothetical protein EMIHUDRAFT_226708 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 82.4185 bits (202), Expect = 1.826e-14 Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = 0 Query: 140 RVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSA------SYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGTFEFSVTTAPVPALDRDHVVFGRLL 284 ++T + I+I P TLS+G++G AP +V F + G + +Y SS+ R+ I G + GG G+++ REI+ +G +R +T + AD N + N L H LL+M RGG FEF +T ALD +V G +L Sbjct: 15 QITSRAELRIAIGDSPPQTLSLGLYGTAAPESVALFEGLCRGISDAGRPPKTLTYAGSSISRIERDRIIVGGSLSGGNGRKVDREIDATGYVRTETLSRADAFANDDSNALPHDRAGLLSMRRGGRAFEFGLTPCANRALDATRIVVGEVL 165
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|495951438|ref|WP_008676017.1| (cyclophilin [Rhodopirellula sallentina] >gi|460933643|gb|EMI57026.1| cyclophilin [Rhodopirellula sallentina SM41]) HSP 1 Score: 81.2629 bits (199), Expect = 1.924e-14 Identity = 56/161 (34.78%), Postives = 81/161 (50.31%), Query Frame = 0 Query: 136 PSNARVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVL---NGQGQSA---SYMYSSVWRVLAGSCI---DMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGTF---EFSVTTAPVPALDRDHVVFGRLL 284 P A VT+KV+FD++I G PAG + MG+FG P TV NF + G+G+S Y S+ RV+ G + D R G GG+ + +D+ + E +H++P +L+M G +F +TT P P LD HVVFGR+L Sbjct: 27 PMEAEVTNKVYFDVTIGGEPAGRIVMGLFGKDVPKTVENFRALCTGEKGEGKSGVPLDYEGSAFHRVIPGFMLQGGDFTRGNGTGGESIY---------------GSDF--DDENFKFRHSQPGILSMANAGKNTNGSQFFITTVPTPHLDGRHVVFGRVL 170
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|1068408901|ref|XP_018051109.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme-like [Atta colombica]) HSP 1 Score: 79.7221 bits (195), Expect = 6.159e-14 Identity = 58/176 (32.95%), Postives = 81/176 (46.02%), Query Frame = 0 Query: 140 RVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSASYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGG---GTFEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDI 312 RVTD+V+FDI I P G + +G+FGD AP TV NF+ Y + RV+ I G V G G +G + I + D T +KH P +++M G +F +TT P P LD H FG+++ S +AVV KI + K +DDI Sbjct: 23 RVTDQVYFDIMIDNHPVGRIIIGLFGDIAPKTVKNFITFATTGIAGKKYAGTKFHRVVKKFMIQGGDVENGDG---------TGSISIYGKYFNDETFE-----IKHTGPLIVSMANAGKDTNGCQFFITTIPTPWLDDHHTAFGKVV---------SGEAVVFKIEQTKTDSDDI 175
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|1025645528|gb|OAA33275.1| (peptidyl-prolyl cis-trans isomerase [Aschersonia aleyrodis RCEF 2490]) HSP 1 Score: 82.4185 bits (202), Expect = 6.661e-14 Identity = 63/190 (33.16%), Postives = 86/190 (45.26%), Query Frame = 0 Query: 144 KVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQ------GQSASYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGTF---EFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDIVASKTLFAAAGK 324 +VFFDISI G AG ++M ++ D P TV NF + G+ G+ Y S RV+ I G G G +G I E AD E LKH +PFLL+M G +F +TT P P LD HVVFG +L + +++V +I +K D A + L A G+ Sbjct: 10 RVFFDISIGGKAAGRITMELYSDLVPKTVENFRCLCTGEKGTGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDG---------TGGESIYGEKFAD-----EAFPLKHEKPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGEVL---------NGKSIVRQIENLKTEAGDKPAKEALIADCGQ 176
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|1070172541|ref|XP_018346489.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase A2-like isoform X2 [Trachymyrmex septentrionalis]) HSP 1 Score: 79.337 bits (194), Expect = 7.739e-14 Identity = 58/176 (32.95%), Postives = 81/176 (46.02%), Query Frame = 0 Query: 140 RVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSASYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGT---FEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDI 312 RVTD+V+FDI I P G + +G+FGD AP TV NF+ Y + RV+ I G V G G +G + I + D T +KH P +++M G +F +TT P P LD H FG+++ S +AVV KI + K +DDI Sbjct: 23 RVTDQVYFDIMIDNHPVGRIIIGLFGDIAPKTVKNFITFATTGIAGKKYAGTKFHRVIKKFMIQGGDVENGDG---------TGSISIYGKYFDDETFE-----VKHTGPLIVSMANAGKNTNGCQFFITTIPTPWLDDHHTAFGKVV---------SGEAVVFKIEQTKTDSDDI 175
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|1009355368|gb|KYM80687.1| (Peptidyl-prolyl cis-trans isomerase B [Atta colombica]) HSP 1 Score: 82.4185 bits (202), Expect = 7.851e-14 Identity = 58/176 (32.95%), Postives = 81/176 (46.02%), Query Frame = 0 Query: 140 RVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSASYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGG---GTFEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDI 312 RVTD+V+FDI I P G + +G+FGD AP TV NF+ Y + RV+ I G V G G +G + I + N E +KH P +++M G +F +TT P P LD H FG+++ S +AVV KI + K +DDI Sbjct: 237 RVTDQVYFDIMIDNHPVGRIIIGLFGDIAPKTVKNFITFATTGIAGKKYAGTKFHRVVKKFMIQGGDVENGDG---------TGSISIYGK-----YFNDETFEIKHTGPLIVSMANAGKDTNGCQFFITTIPTPWLDDHHTAFGKVV---------SGEAVVFKIEQTKTDSDDI 389
BLAST of EWM23837.1 vs. NCBI_GenBank
Match: gi|1069694902|ref|XP_018306896.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase A2-like [Trachymyrmex zeteki]) HSP 1 Score: 79.7221 bits (195), Expect = 9.981e-14 Identity = 58/176 (32.95%), Postives = 81/176 (46.02%), Query Frame = 0 Query: 140 RVTDKVFFDISIAGVPAGTLSMGVFGDQAPVTVGNFLKVLNGQGQSASYMYSSVWRVLAGSCIDMGRVGGGGGKQLKREINESGVMRIKTENAADWTRNTEVNGLKHAEPFLLTMVRGGGT---FEFSVTTAPVPALDRDHVVFGRLLMKPEEKERESNQAVVDKIGRVKVSTDDI 312 RVTD+V+FDI I P G + +G+FGD AP TV NF+ Y + RV+ I G V G G +G + I + D E +KH P +++M G +F +TT P P LD H FG+++ S +AVV KI + K +DDI Sbjct: 23 RVTDQVYFDIMIDNHPVGRIVIGLFGDIAPKTVKNFITFATTGIAGKKYAGTKFHRVIKKFMIQGGDVENGDG---------TGSISIYGKYFDD-----ETFKVKHTGPLIVSMANAGKNTNGCQFFITTIPTPWLDDRHTAFGKIV---------SGEAVVFKIEQTKTDSDDI 175 The following BLAST results are available for this feature:
BLAST of EWM23837.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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