EWM23848.1, cds6823 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|585105119|gb|EWM23848.1| (Tetratricopeptide-like helical, partial [Nannochloropsis gaditana]) HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0 Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0
Query: 1 MAGNSQPASRLKPSICLHLLLMVMSSLITAGSARAFALFLRPFPSSPPHHLPLASLSSSLSSTSRLSDSRRGHHPTWISRNRRPRRRLFFTTGPIHQTMAPSSTSPATNTATNRSCSIDFERLGLLHAPVLQSLRKAAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARLRGGWDARGGRGGRA 350
MAGNSQPASRLKPSICLHLLLMVMSSLITAGSARAFALFLRPFPSSPPHHLPLASLSSSLSSTSRLSDSRRGHHPTWISRNRRPRRRLFFTTGPIHQTMAPSSTSPATNTATNRSCSIDFERLGLLHAPVLQSLRKAAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARLRGGWDARGGRGGRA
Sbjct: 1 MAGNSQPASRLKPSICLHLLLMVMSSLITAGSARAFALFLRPFPSSPPHHLPLASLSSSLSSTSRLSDSRRGHHPTWISRNRRPRRRLFFTTGPIHQTMAPSSTSPATNTATNRSCSIDFERLGLLHAPVLQSLRKAAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARLRGGWDARGGRGGRA 350
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|585110565|gb|EWM28220.1| (pentatricopeptide repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 110.538 bits (275), Expect = 8.225e-23 Identity = 77/198 (38.89%), Postives = 100/198 (50.51%), Query Frame = 0
Query: 161 DLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMRE-EGG---------LVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLA-----------------VEGGKVGGR------EGGEVVPDLVIFNALLRVY 325
DL T M+ + RD GAE VL + GLLPD+V Y+ L++ +A RG+ AE V M E EGG ++P+V YT+LM AYA D EG+E VL RM A +AP+V YT+L+ AY GDV GAE V+RR+L A V G G E V+P + F L+ VY
Sbjct: 154 DLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMLSAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVY 351 HSP 2 Score: 108.997 bits (271), Expect = 2.366e-22 Identity = 71/189 (37.57%), Postives = 100/189 (52.91%), Query Frame = 0
Query: 138 AVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDL-VIFNALLRVY 325
A G+VE + A++ R+E + +++T T M A+ +R D GAE VL RM + + P+ Y+ LL+ + GN AEEV M E G++P+ + +LM YA + E A+ VL RM AAGV P A+ LL AY GDV GAE V+RR RE E PD + +N L+ Y
Sbjct: 247 AAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMLSAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARM-EAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR------------RE-AEAYPDFPLTYNTLMNGY 421 HSP 3 Score: 102.449 bits (254), Expect = 3.677e-20 Identity = 77/238 (32.35%), Postives = 114/238 (47.90%), Query Frame = 0
Query: 127 HAPVLQSLRKAAVN-GNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASR-GNVGKAEEVFGTMREEG----------------------------------GLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRS 328
+A SL A N G++ A ++ R+ + D T + A + RR+ AE ++A M+ G+L D+V YS LL +A++ G++GKAEEV M +G GL P+ Y LM A+ RD GAE +L RM GV +V +T L+ AYA GDV GAE V+ R +LAV + GG + E P++ ++ L+ VY R+
Sbjct: 534 NAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAFTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLAR-MLAVAEEEGGGSKDCE--PNVHTYSTLMNVYARA 768 HSP 4 Score: 100.523 bits (249), Expect = 1.598e-19 Identity = 77/201 (38.31%), Postives = 98/201 (48.76%), Query Frame = 0
Query: 134 LRKAAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSV-RAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGR-EGGEVVP---DLVIFNALLRVYVRSK 329
L VNGN A ++AR+E V LT M + R + A+ VLARM+ G+ P + + LLN + G+VG AE+V R E P Y +LM YA D GAE VL RM A GV PD + LL AYA GD GAE V+ RV GK G + +GGE +++FN LL Y K
Sbjct: 313 LHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVL--RRREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAVLLRV-----QGKGGEKWDGGEFAGLSLTVLMFNTLLSAYAARK 506 HSP 5 Score: 100.523 bits (249), Expect = 1.820e-19 Identity = 65/162 (40.12%), Postives = 89/162 (54.94%), Query Frame = 0
Query: 169 MQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTM----REEGG----LVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALL 322
M A RRDA GAE +L RMK G+ ++ ++ L+N +A RG+V AE V M EEGG P+V Y++LM YA + GAE VL RM AAG AP+V +T L+ AY+ GD GAE V++R+ E V P+++ +N LL
Sbjct: 683 MDAFTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAVGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM------------EAAGVSPNVLTYNTLL 832 HSP 6 Score: 96.2857 bits (238), Expect = 4.638e-18 Identity = 64/209 (30.62%), Postives = 104/209 (49.76%), Query Frame = 0
Query: 137 AAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAG---------VAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARL 336
A G++ +A ++ R+ D V + T + ++ ++ + AE VL RM+T+GL P + Y +L++ R + AE++ M++E G+ +V+ +T+LM AYA D EGAE VL RM A P+VH Y+ L+ YA G GAE V+ R+ A P+++ F L+ Y R+ P+ A L
Sbjct: 616 ATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAFTRRRDARGAEKILDRMKKE-GVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAVGAEGVLTRMTAA------------GWAPNVITFTTLMTAYSRAGDPEGAEL 811 HSP 7 Score: 91.2781 bits (225), Expect = 2.400e-16 Identity = 70/211 (33.18%), Postives = 102/211 (48.34%), Query Frame = 0
Query: 134 LRKAAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGG----------LVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAG--------VAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYV 326
L V G+V A ++ R E + P LT M + + D GAE VLARM+ G+ PD S LL+ +A G+ AE V ++ +GG L +V + +L+ AYA +D +GAE VL R+ A G + P+ Y LL AY N GD+AGA+ V++R+ V+ G + PD FN L+ +V
Sbjct: 383 LNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAVLLRVQGKGGEKWDGGEFAGLSLTVLMFNTLLSAYAARKDVKGAEQVLARLVAEGERAGEGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRM---VQAG---------LSPDTYTFNTLIAAFV 581 HSP 8 Score: 90.8929 bits (224), Expect = 3.314e-16 Identity = 61/184 (33.15%), Postives = 94/184 (51.09%), Query Frame = 0
Query: 143 VEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYV 326
+E G + E+ V +++T T M A+ D G+EAVL RM+ + P+++ Y++L+ + RG+V AE V M + P+ YT+L+ AY V+ + GAE+VL RM AAGV P + L+ YA G+V A+ V+ R+ E V P + F+ LL YV
Sbjct: 217 LEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMLS-AYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARM------------EAAGVGPTAMAFDTLLNAYV 387 HSP 9 Score: 89.7373 bits (221), Expect = 7.454e-16 Identity = 69/195 (35.38%), Postives = 98/195 (50.26%), Query Frame = 0
Query: 146 AGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLG---------LLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAG--AEDVMRRVLLAVEGGKVGGREGG--EVVPDLVIFNALLRVYVR 327
A ++ R++ + V ++ T M A+ R D GAE VLARM + P++ YS L+N++A G AE V M G P+V +T+LM AY+ + DPEGAE VL RM AAGV+P+V Y LL A + +G G E +RVL + + +GG E PD + LL +R
Sbjct: 695 AEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAVGAEGVLTRM-TAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLREGEVEERRAKRVLQVYDTMRRSAGKGGGLEKAPDEATYTVLLTCLLR 888 HSP 10 Score: 79.337 bits (194), Expect = 2.074e-12 Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 0
Query: 134 LRKAAVNGNVEEAGALIARL--------ELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEG-AEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRV 294
L A +V+ A ++ARL E ++ + +T + A+ D GA+ VL RM GL PD ++ L+ +R V AE++ M+E G ++ V Y+ L++ YA G AE+VL RMA GVAP+ + Y L+ Y G++ AEDV+ R+
Sbjct: 499 LSAYAARKDVKGAEQVLARLVAEGERAGEGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEKMVAYMQEHG-VLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERM 667 HSP 11 Score: 78.5666 bits (192), Expect = 3.994e-12 Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0
Query: 229 LVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVY 325
L P + + ++MK YA RDPEGAE VL + A G+ PDV YT L+ AYA GD GAE V+RR+L EGG+V E V+P+++ + L+ Y
Sbjct: 151 LSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEG-EGGRVREEEVLRVLPNVMTYTTLMTAY 246
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|553186266|ref|XP_005854389.1| (putative udp-glucosyltransferase, partial [Nannochloropsis gaditana CCMP526] >gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 108.612 bits (270), Expect = 1.823e-22 Identity = 71/176 (40.34%), Postives = 94/176 (53.41%), Query Frame = 0
Query: 161 DLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMRE-EGG---------LVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYV 326
DL T M+ + RD GAE VL + GLLPD+V Y+ L++ +A RG+ AE V M E EGG ++P+V YT+LM AYA D EG+E VL RM A +AP+V YT+L+ AY GDV GAE V+RR++ A V P+ + LL Y
Sbjct: 206 DLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAY------------VAPNANTYTTLLHAYT 369 HSP 2 Score: 107.457 bits (267), Expect = 4.068e-22 Identity = 71/189 (37.57%), Postives = 100/189 (52.91%), Query Frame = 0
Query: 138 AVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDL-VIFNALLRVY 325
A G+VE + A++ R+E + +++T T M A+ +R D GAE VL RM + + P+ Y+ LL+ + GN AEEV M E G++P+ + +LM YA + E A+ VL RM AAGV P A+ LL AY GDV GAE V+RR RE E PD + +N L+ Y
Sbjct: 299 AAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARM-EAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR------------RE-AEAYPDFPLTYNTLMNGY 473 HSP 3 Score: 93.2041 bits (230), Expect = 2.922e-17 Identity = 65/162 (40.12%), Postives = 81/162 (50.00%), Query Frame = 0
Query: 134 LRKAAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSV-RAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRV 294
L VNGN A ++AR+E V LT M + R + A+ VLARM+ G+ P + + LLN + G+VG AE+V R E P Y +LM YA D GAE VL RM A GV PD + LL AYA GD GAE V+ RV
Sbjct: 365 LHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVL--RRREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAVLLRV 524 HSP 4 Score: 89.3521 bits (220), Expect = 6.471e-16 Identity = 61/184 (33.15%), Postives = 94/184 (51.09%), Query Frame = 0
Query: 143 VEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYV 326
+E G + E+ V +++T T M A+ D G+EAVL RM+ + P+++ Y++L+ + RG+V AE V M + P+ YT+L+ AY V+ + GAE+VL RM AAGV P + L+ YA G+V A+ V+ R+ E V P + F+ LL YV
Sbjct: 269 LEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMI-SAYVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARM------------EAAGVGPTAMAFDTLLNAYV 439 HSP 5 Score: 77.7962 bits (190), Expect = 3.675e-12 Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0
Query: 229 LVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVY 325
L P + + ++MK YA RDPEGAE VL + A G+ PDV YT L+ AYA GD GAE V+RR+L EGG+V E V+P+++ + L+ Y
Sbjct: 203 LSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRMLEG-EGGRVREEEVLRVLPNVMTYTTLMTAY 298
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|585112897|gb|EWM30238.1| (pentatricopeptide repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 108.997 bits (271), Expect = 2.623e-22 Identity = 67/217 (30.88%), Postives = 110/217 (50.69%), Query Frame = 0
Query: 134 LRKAAVNGNVEEAGALIARLELDH----------VPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARLRGGW 340
L A NGN E A A++ ++ D V +++T + M A+ ++ + GAE VLARM+ G+ P++V Y+ L +A GN A +V M++ L P+V Y +++ A+A +GAE+V+ M + V P+ Y L+ AYAN G+ GAEDV+RR+ + EV P+++ F++++ Y RG W
Sbjct: 637 LSTYASNGNSEGAEAVLNGMKDDEAEFGFGPEKAVEPNVVTYSSLMTAYAIKGHSEGAERVLARMQVAGMQPNLVTYNSLATAYAKGGNWQGANQVLKRMQQSQQLEPTVTTYNAVLNAHANKGHWKGAEEVVQHMNESNVQPNTTTYNTLIDAYANKGNWEGAEDVLRRM-----------NKLNEVEPNVISFSSVINAYAH---------RGNW 833 HSP 2 Score: 99.3673 bits (246), Expect = 4.089e-19 Identity = 55/173 (31.79%), Postives = 93/173 (53.76%), Query Frame = 0
Query: 162 LLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAA 334
++T + AH + GAE VL R+ G+ P++ ++ ++ + G++ E V M ++ GL +V ++S++ AYA D GAEDVL RM GV P++ ++ ++ AYAN G GAE V+ R L V+G + PD++ N++L+VYV ++ D
Sbjct: 934 VMTYNSLINAHAKDGNWKGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRMTDDFGLKANVTTWSSIINAYATRGDFVGAEDVLRRMQEHGVEPNITTFSSVINAYANKGHWVGAESVLSR--LEVKG----------LEPDVITHNSMLKVYVNARDVDGC 1094 HSP 3 Score: 96.2857 bits (238), Expect = 4.156e-18 Identity = 63/202 (31.19%), Postives = 106/202 (52.48%), Query Frame = 0
Query: 138 AVNGNVEEAGALIARL-ELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRM-----------AAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVR 327
A GN E A ++ R+ +L+ V ++++ + + A+ R + GAE VL RM+ GL P+++ Y+ L+ +A G+ AE+V M + P+ Y ++ +YA +GAEDVL RM + + +AP V Y L+ A+A G+ GAEDV+RR+L E G V P++ FN++++ Y +
Sbjct: 792 ANKGNWEGAEDVLRRMNKLNEVEPNVISFSSVINAYAHRGNWHGAENVLRRMQYQGLQPNLITYNSLVTAYAKEGHWQGAEDVLRRMHANPHVEPNTTTYNLVINSYANKGHWKGAEDVLQRMLTVGHSLGSGGSGSAIAPTVMTYNSLINAHAKDGNWKGAEDVLRRLL---ERG---------VEPNVTTFNSVIKAYTK 981 HSP 4 Score: 90.5077 bits (223), Expect = 3.510e-16 Identity = 55/189 (29.10%), Postives = 94/189 (49.74%), Query Frame = 0
Query: 138 AVNGNVEEAGALIARLEL-DHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVY 325
A GN + A ++ R++ + + T + AH + GAE V+ M + P+ Y+ L++ +A++GN AE+V M + + P+V +++S++ AYA + GAE+VL RM G+ P++ Y L+ AYA G GAEDV+RR+ V P+ +N ++ Y
Sbjct: 721 AKGGNWQGANQVLKRMQQSQQLEPTVTTYNAVLNAHANKGHWKGAEEVVQHMNESNVQPNTTTYNTLIDAYANKGNWEGAEDVLRRMNKLNEVEPNVISFSSVINAYAHRGNWHGAENVLRRMQYQGLQPNLITYNSLVTAYAKEGHWQGAEDVLRRM-----------HANPHVEPNTTTYNLVINSY 898 HSP 5 Score: 86.6557 bits (213), Expect = 7.048e-15 Identity = 52/158 (32.91%), Postives = 79/158 (50.00%), Query Frame = 0
Query: 177 DAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMRE---------EGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVY 325
D GAE ++K P + Y+ LL+ +AS GN AE V M++ E + P+V Y+SLM AYA+ EGAE VL RM AG+ P++ Y L AYA G+ GA V++R+ ++ ++ P + +NA+L +
Sbjct: 610 DEEGAEEAFCQLKNQNGRPGVYLYNALLSTYASNGNSEGAEAVLNGMKDDEAEFGFGPEKAVEPNVVTYSSLMTAYAIKGHSEGAERVLARMQVAGMQPNLVTYNSLATAYAKGGNWQGANQVLKRM-----------QQSQQLEPTVTTYNAVLNAH 756 HSP 6 Score: 85.1149 bits (209), Expect = 2.260e-14 Identity = 63/204 (30.88%), Postives = 101/204 (49.51%), Query Frame = 0
Query: 138 AVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARM-KTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAE---DVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARLR 337
A +GN + A ++ RL V ++ T ++A+ G E VL RM GL ++ +S ++N +A+RG+ AE+V M+E G + P++ ++S++ AYA GAE VL R+ G+ PDV + +L+ Y N DV G D++RR+L EG P V F L + + K PD +L+
Sbjct: 945 AKDGNWKGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRMTDDFGLKANVTTWSSIINAYATRGDFVGAEDVLRRMQEHG-VEPNITTFSSVINAYANKGHWVGAESVLSRLEVKGLEPDVITHNSMLKVYVNARDVDGCGRGLDLVRRLL-----------EGRRHKPTHVTFKTLFTLLL--KHPDPRKLQ 1134 HSP 7 Score: 77.7962 bits (190), Expect = 6.326e-12 Identity = 48/165 (29.09%), Postives = 84/165 (50.91%), Query Frame = 0
Query: 141 GNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMK-TLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTM----------REEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRV 294
GN A ++ R++ + +L+T + A+ GAE VL RM + P+ Y++++N +A++G+ AE+V M + P+V Y SL+ A+A + +GAEDVL R+ GV P+V + +++AY G + G E+V+ R+
Sbjct: 831 GNWHGAENVLRRMQYQGLQPNLITYNSLVTAYAKEGHWQGAEDVLRRMHANPHVEPNTTTYNLVINSYANKGHWKGAEDVLQRMLTVGHSLGSGGSGSAIAPTVMTYNSLINAHAKDGNWKGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRM 995
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|585112896|gb|EWM30237.1| (pentatricopeptide repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 108.612 bits (270), Expect = 2.994e-22 Identity = 67/217 (30.88%), Postives = 110/217 (50.69%), Query Frame = 0
Query: 134 LRKAAVNGNVEEAGALIARLELDH----------VPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARLRGGW 340
L A NGN E A A++ ++ D V +++T + M A+ ++ + GAE VLARM+ G+ P++V Y+ L +A GN A +V M++ L P+V Y +++ A+A +GAE+V+ M + V P+ Y L+ AYAN G+ GAEDV+RR+ + EV P+++ F++++ Y RG W
Sbjct: 691 LSTYASNGNSEGAEAVLNGMKDDEAEFGFGPEKAVEPNVVTYSSLMTAYAIKGHSEGAERVLARMQVAGMQPNLVTYNSLATAYAKGGNWQGANQVLKRMQQSQQLEPTVTTYNAVLNAHANKGHWKGAEEVVQHMNESNVQPNTTTYNTLIDAYANKGNWEGAEDVLRRM-----------NKLNEVEPNVISFSSVINAYAH---------RGNW 887 HSP 2 Score: 99.3673 bits (246), Expect = 4.452e-19 Identity = 55/173 (31.79%), Postives = 93/173 (53.76%), Query Frame = 0
Query: 162 LLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAA 334
++T + AH + GAE VL R+ G+ P++ ++ ++ + G++ E V M ++ GL +V ++S++ AYA D GAEDVL RM GV P++ ++ ++ AYAN G GAE V+ R L V+G + PD++ N++L+VYV ++ D
Sbjct: 988 VMTYNSLINAHAKDGNWKGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRMTDDFGLKANVTTWSSIINAYATRGDFVGAEDVLRRMQEHGVEPNITTFSSVINAYANKGHWVGAESVLSR--LEVKG----------LEPDVITHNSMLKVYVNARDVDGC 1148 HSP 3 Score: 95.9005 bits (237), Expect = 5.345e-18 Identity = 63/202 (31.19%), Postives = 106/202 (52.48%), Query Frame = 0
Query: 138 AVNGNVEEAGALIARL-ELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRM-----------AAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVR 327
A GN E A ++ R+ +L+ V ++++ + + A+ R + GAE VL RM+ GL P+++ Y+ L+ +A G+ AE+V M + P+ Y ++ +YA +GAEDVL RM + + +AP V Y L+ A+A G+ GAEDV+RR+L E G V P++ FN++++ Y +
Sbjct: 846 ANKGNWEGAEDVLRRMNKLNEVEPNVISFSSVINAYAHRGNWHGAENVLRRMQYQGLQPNLITYNSLVTAYAKEGHWQGAEDVLRRMHANPHVEPNTTTYNLVINSYANKGHWKGAEDVLQRMLTVGHSLGSGGSGSAIAPTVMTYNSLINAHAKDGNWKGAEDVLRRLL---ERG---------VEPNVTTFNSVIKAYTK 1035 HSP 4 Score: 90.5077 bits (223), Expect = 4.385e-16 Identity = 55/189 (29.10%), Postives = 94/189 (49.74%), Query Frame = 0
Query: 138 AVNGNVEEAGALIARLEL-DHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVY 325
A GN + A ++ R++ + + T + AH + GAE V+ M + P+ Y+ L++ +A++GN AE+V M + + P+V +++S++ AYA + GAE+VL RM G+ P++ Y L+ AYA G GAEDV+RR+ V P+ +N ++ Y
Sbjct: 775 AKGGNWQGANQVLKRMQQSQQLEPTVTTYNAVLNAHANKGHWKGAEEVVQHMNESNVQPNTTTYNTLIDAYANKGNWEGAEDVLRRMNKLNEVEPNVISFSSVINAYAHRGNWHGAENVLRRMQYQGLQPNLITYNSLVTAYAKEGHWQGAEDVLRRM-----------HANPHVEPNTTTYNLVINSY 952 HSP 5 Score: 86.6557 bits (213), Expect = 8.172e-15 Identity = 52/158 (32.91%), Postives = 79/158 (50.00%), Query Frame = 0
Query: 177 DAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMRE---------EGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVY 325
D GAE ++K P + Y+ LL+ +AS GN AE V M++ E + P+V Y+SLM AYA+ EGAE VL RM AG+ P++ Y L AYA G+ GA V++R+ ++ ++ P + +NA+L +
Sbjct: 664 DEEGAEEAFCQLKNQNGRPGVYLYNALLSTYASNGNSEGAEAVLNGMKDDEAEFGFGPEKAVEPNVVTYSSLMTAYAIKGHSEGAERVLARMQVAGMQPNLVTYNSLATAYAKGGNWQGANQVLKRM-----------QQSQQLEPTVTTYNAVLNAH 810 HSP 6 Score: 85.1149 bits (209), Expect = 2.326e-14 Identity = 63/204 (30.88%), Postives = 101/204 (49.51%), Query Frame = 0
Query: 138 AVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARM-KTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAE---DVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARLR 337
A +GN + A ++ RL V ++ T ++A+ G E VL RM GL ++ +S ++N +A+RG+ AE+V M+E G + P++ ++S++ AYA GAE VL R+ G+ PDV + +L+ Y N DV G D++RR+L EG P V F L + + K PD +L+
Sbjct: 999 AKDGNWKGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRMTDDFGLKANVTTWSSIINAYATRGDFVGAEDVLRRMQEHG-VEPNITTFSSVINAYANKGHWVGAESVLSRLEVKGLEPDVITHNSMLKVYVNARDVDGCGRGLDLVRRLL-----------EGRRHKPTHVTFKTLFTLLL--KHPDPRKLQ 1188 HSP 7 Score: 77.411 bits (189), Expect = 7.802e-12 Identity = 48/165 (29.09%), Postives = 84/165 (50.91%), Query Frame = 0
Query: 141 GNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMK-TLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTM----------REEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRV 294
GN A ++ R++ + +L+T + A+ GAE VL RM + P+ Y++++N +A++G+ AE+V M + P+V Y SL+ A+A + +GAEDVL R+ GV P+V + +++AY G + G E+V+ R+
Sbjct: 885 GNWHGAENVLRRMQYQGLQPNLITYNSLVTAYAKEGHWQGAEDVLRRMHANPHVEPNTTTYNLVINSYANKGHWKGAEDVLQRMLTVGHSLGSGGSGSAIAPTVMTYNSLINAHAKDGNWKGAEDVLRRLLERGVEPNVTTFNSVIKAYTKEGHIEGVENVLTRM 1049
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|553186263|ref|XP_005854388.1| (hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana CCMP526] >gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 103.219 bits (256), Expect = 7.876e-21 Identity = 78/238 (32.77%), Postives = 114/238 (47.90%), Query Frame = 0
Query: 127 HAPVLQSLRKAAVN-GNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASR-GNVGKAEEVFGTMREEG----------------------------------GLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRS 328
+A SL A N G++ A ++ R+ + D T + A + RR+ AE ++A M+ G+L D+V YS LL +A++ G++GKAEEV M +G GL P+ Y LM AY RD GAE +L RM GV +V +T L+ AYA GDV GAE V+ R +LAV + GG + E P++ ++ L+ VY R+
Sbjct: 22 NAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLAR-MLAVAEEEGGGSKDCE--PNVHTYSTLMNVYARA 256 HSP 2 Score: 102.064 bits (253), Expect = 2.333e-20 Identity = 65/162 (40.12%), Postives = 90/162 (55.56%), Query Frame = 0
Query: 169 MQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTM----REEGG----LVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALL 322
M A+ RRDA GAE +L RMK G+ ++ ++ L+N +A RG+V AE V M EEGG P+V Y++LM YA + GAE VL RM AAG AP+V +T L+ AY+ GD GAE V++R+ E V P+++ +N LL
Sbjct: 171 MDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM------------EAAGVSPNVLTYNTLL 320 HSP 3 Score: 98.5969 bits (244), Expect = 3.809e-19 Identity = 67/221 (30.32%), Postives = 112/221 (50.68%), Query Frame = 0
Query: 125 LLHAPVLQSLRKAAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAG---------VAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAARL 336
+ ++ +LQ A G++ +A ++ R+ D V + T + ++ ++ + AE VL RM+T+GL P + Y +L++ + R + AE++ M++E G+ +V+ +T+LM AYA D EGAE VL RM A P+VH Y+ L+ YA G AGAE V+ R+ A P+++ F L+ Y R+ P+ A L
Sbjct: 94 VTYSQLLQGY--ATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKE-GVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAA------------GWAPNVITFTTLMTAYSRAGDPEGAEL 299 HSP 4 Score: 89.7373 bits (221), Expect = 4.228e-16 Identity = 69/195 (35.38%), Postives = 98/195 (50.26%), Query Frame = 0
Query: 146 AGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLG---------LLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAG--AEDVMRRVLLAVEGGKVGGREGG--EVVPDLVIFNALLRVYVR 327
A ++ R++ + V ++ T M A+ R D GAE VLARM + P++ YS L+N++A G AE V M G P+V +T+LM AY+ + DPEGAE VL RM AAGV+P+V Y LL A + +G G E +RVL + + +GG E PD + LL +R
Sbjct: 183 AEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRM-TAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLREGEVEERRAKRVLQVYDTMRRSAGKGGGLEKAPDEATYTVLLTCLLR 376
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|923121909|ref|XP_013754425.1| (hypothetical protein AMSG_08885 [Thecamonas trahens ATCC 50062] >gi|906560137|gb|KNC53380.1| hypothetical protein AMSG_08885 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 101.293 bits (251), Expect = 7.513e-20 Identity = 60/155 (38.71%), Postives = 83/155 (53.55%), Query Frame = 0
Query: 175 RRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSK 329
+R AEA+LA + GL P +V Y+ML+ +A G+V AE V M+ E G+ P+V + SLMK Y + D AED+L RM + GVAP V Y L+ Y G+++ AE V R+L G + PD + NALL+ Y R K
Sbjct: 628 KRKYAEAEAILADILATGLRPSVVMYTMLVGAYAQSGDVAAAENVIVRMQREAGVEPNVVTFNSLMKGYTAAGDMAAAEDILDRMDSRGVAPTVFTYNTLMMGYTRSGEMSDAEGVRSRML------------GRGIEPDRITLNALLKGYTRVK 770 HSP 2 Score: 75.485 bits (184), Expect = 3.208e-11 Identity = 68/249 (27.31%), Postives = 107/249 (42.97%), Query Frame = 0
Query: 123 LGLLHAPVLQSLRKAAVNGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAV------------------------------------LARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAAR 335
LG++ +L +R G +E+A A++ R+ +V + +T MQ + R+ AEAV +RM G+ D V ++ LL + ++ AE V MR GL P Y +L + Y + + AED + RM AAG+AP+ + Y ++L+ Y D+ AEDV+ R+ R G + PD ++AL+R YV DAAR
Sbjct: 48 LGVVEYTML--VRGYTACGQLEQAEAVLDRMAAANVAPNDVTFNTLMQGYASRKRMDAAEAVARRMVRSGIPMDHYSFNILLGGYIEAHAIEAAEELVCSRMPAAGVAYDPVTFTQLLRGYVLIRDISSAENVLKRMRA-AGLDPECMTYNNLAQGYTAEKRMDLAEDAVNRMIAAGIAPNNYTYNIILQGYTRSRDMTTAEDVVARM-----------RAAG-LSPDRFTYSALVRGYVEVGHGDAAR 281
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|674940888|emb|CDX92402.1| (BnaA10g14410D [Brassica napus]) HSP 1 Score: 98.9821 bits (245), Expect = 5.382e-19 Identity = 62/218 (28.44%), Postives = 107/218 (49.08%), Query Frame = 0
Query: 125 LLHAPVLQSLRKAAV-------NGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAAR 335
+LH+ V ++R G +EEA R++ V +L ++ + D G V+ M+ G+ PD+V +S L+N +S G++ + EE++G M E GG+ P + A++ L K Y +R+PE AE VL +M GV P+V YT ++ + + G++ A V ++ G VG + P+L + L+ + +K P A
Sbjct: 522 MLHSKVKPNVRTCGTIMNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLVKGFLASNDMEGVGEVVNLMEEFGVRPDVVTFSTLMNAWSSVGDMKRCEEIYGDMLE-GGIDPDIHAFSILAKGYTRAREPEKAEQVLNQMKKFGVRPNVVIYTTIISGWCSAGEMKKAMQVYNKMC-----GTVG------LSPNLTTYETLMWGFGEAKQPWKAE 727 HSP 2 Score: 75.8702 bits (185), Expect = 2.024e-11 Identity = 50/194 (25.77%), Postives = 99/194 (51.03%), Query Frame = 0
Query: 143 VEEAGALIARLELDHVPLDLLTLTHYMQAHI-VRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAAR 335
+EEA +++ +++ V D++T +A+ + + ++ RM + P++ ++N + G + +A F M+E G + P++ + SL+K + S D EG +V+ M GV PDV ++ L+ A+++VGD+ E++ +L EGG + PD+ F+ L + Y R++ P+ A
Sbjct: 476 IEEAWSIVYKMQSYGVKPDVVTFNTLARAYARIGSTCTAEDMIIPRMLHSKVKPNVRTCGTIMNGYCEEGKMEEALRFFYRMKELG-VHPNLFVFNSLVKGFLASNDMEGVGEVVNLMEEFGVRPDVVTFSTLMNAWSSVGDMKRCEEIYGDML-----------EGG-IDPDIHAFSILAKGYTRAREPEKAE 656
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|922565477|ref|XP_013611001.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g21222 [Brassica oleracea var. oleracea]) HSP 1 Score: 98.5969 bits (244), Expect = 6.867e-19 Identity = 62/218 (28.44%), Postives = 107/218 (49.08%), Query Frame = 0
Query: 125 LLHAPVLQSLRKAAV-------NGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAAR 335
+LH+ V ++R G +EEA R++ V +L ++ + D G V+ M+ G+ PD+V +S L+N +S G++ + EE++G M E GG+ P + A++ L K Y +R+PE AE VL +M GV P+V YT ++ + + G++ A V ++ G VG + P+L + L+ + +K P A
Sbjct: 526 MLHSKVKPNVRTCGTIMNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLVKGFLASNDMDGVGEVVNLMEEFGVRPDVVTFSTLMNAWSSVGDMKRCEEIYGDMLE-GGIDPDIHAFSILAKGYTRAREPEKAEQVLNQMKKFGVRPNVVIYTTIISGWCSAGEMKKAMQVYNKMC-----GTVG------LSPNLTTYETLMWGFGEAKQPWKAE 731 HSP 2 Score: 74.3294 bits (181), Expect = 6.780e-11 Identity = 49/194 (25.26%), Postives = 99/194 (51.03%), Query Frame = 0
Query: 143 VEEAGALIARLELDHVPLDLLTLTHYMQAHI-VRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAAR 335
+EEA +++ +++ V D++T +A+ + + ++ RM + P++ ++N + G + +A F M+E G + P++ + SL+K + S D +G +V+ M GV PDV ++ L+ A+++VGD+ E++ +L EGG + PD+ F+ L + Y R++ P+ A
Sbjct: 480 IEEAWSIVYKMQSYGVKPDVVTFNTLARAYARIGSTCTAEDMIIPRMLHSKVKPNVRTCGTIMNGYCEEGKMEEALRFFYRMKELG-VHPNLFVFNSLVKGFLASNDMDGVGEVVNLMEEFGVRPDVVTFSTLMNAWSSVGDMKRCEEIYGDML-----------EGG-IDPDIHAFSILAKGYTRAREPEKAE 660 HSP 3 Score: 65.4698 bits (158), Expect = 5.756e-8 Identity = 51/210 (24.29%), Postives = 96/210 (45.71%), Query Frame = 0
Query: 148 ALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAED-VMRRVLLA----------------VEGGKVGG--------REGGEVVPDLVIFNALLRVYVRSKGPD 332
+LI+++E + + D + + A + A + +MK G P ++ L+ + G + ++ + M ++ L P+ R L++A+ R E A ++++M + GV PDV + L RAYA +G AED ++ R+L + E GK+ +E G V P+L +FN+L++ ++ S D
Sbjct: 379 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKNGKLEESSRLLEMMLKDEMLQPNDRTCNILVQAWCNQRMIEEAWSIVYKMQSYGVKPDVVTFNTLARAYARIGSTCTAEDMIIPRMLHSKVKPNVRTCGTIMNGYCEEGKMEEALRFFYRMKELG-VHPNLFVFNSLVKGFLASNDMD 587
BLAST of EWM23848.1 vs. NCBI_GenBank
Match: gi|923893300|ref|XP_013717592.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g21222 [Brassica napus]) HSP 1 Score: 98.5969 bits (244), Expect = 7.046e-19 Identity = 62/218 (28.44%), Postives = 107/218 (49.08%), Query Frame = 0
Query: 125 LLHAPVLQSLRKAAV-------NGNVEEAGALIARLELDHVPLDLLTLTHYMQAHIVRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAAR 335
+LH+ V ++R G +EEA R++ V +L ++ + D G V+ M+ G+ PD+V +S L+N +S G++ + EE++G M E GG+ P + A++ L K Y +R+PE AE VL +M GV P+V YT ++ + + G++ A V ++ G VG + P+L + L+ + +K P A
Sbjct: 522 MLHSKVKPNVRTCGTIMNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLVKGFLASNDMDGVGEVVNLMEEFGVRPDVVTFSTLMNAWSSVGDMKRCEEIYGDMLE-GGIDPDIHAFSILAKGYTRAREPEKAEQVLNQMKKFGVRPNVVIYTTIISGWCSAGEMKKAMQVYNKMC-----GTVG------LSPNLTTYETLMWGFGEAKQPWKAE 727 HSP 2 Score: 74.7146 bits (182), Expect = 6.294e-11 Identity = 49/194 (25.26%), Postives = 99/194 (51.03%), Query Frame = 0
Query: 143 VEEAGALIARLELDHVPLDLLTLTHYMQAHI-VRRDAPGAEAVLARMKTLGLLPDIVPYSMLLNLHASRGNVGKAEEVFGTMREEGGLVPSVRAYTSLMKAYAVSRDPEGAEDVLFRMAAAGVAPDVHAYTMLLRAYANVGDVAGAEDVMRRVLLAVEGGKVGGREGGEVVPDLVIFNALLRVYVRSKGPDAAR 335
+EEA +++ +++ V D++T +A+ + + ++ RM + P++ ++N + G + +A F M+E G + P++ + SL+K + S D +G +V+ M GV PDV ++ L+ A+++VGD+ E++ +L EGG + PD+ F+ L + Y R++ P+ A
Sbjct: 476 IEEAWSIVYKMQSYGVKPDVVTFNTLARAYARIGSTCTAEDMIIPRMLHSKVKPNVRTCGTIMNGYCEEGKMEEALRFFYRMKELG-VHPNLFVFNSLVKGFLASNDMDGVGEVVNLMEEFGVRPDVVTFSTLMNAWSSVGDMKRCEEIYGDML-----------EGG-IDPDIHAFSILAKGYTRAREPEKAE 656 The following BLAST results are available for this feature:
BLAST of EWM23848.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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