EWM23853.1, cds6819 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23853.1 vs. NCBI_GenBank
Match: gi|585105125|gb|EWM23853.1| (hypothetical protein Naga_100464g6 [Nannochloropsis gaditana]) HSP 1 Score: 723.776 bits (1867), Expect = 0.000e+0 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0 Query: 1 MLCADGGVFSSRCANFGLITVTIRPYRLSPSAFWMKCVFSTSTFLLSCTLLVVSPRFNDAFLRGEMSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDSNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGNVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTLFLQGSVCTA 361 MLCADGGVFSSRCANFGLITVTIRPYRLSPSAFWMKCVFSTSTFLLSCTLLVVSPRFNDAFLRGEMSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDSNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGNVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTLFLQGSVCTA Sbjct: 1 MLCADGGVFSSRCANFGLITVTIRPYRLSPSAFWMKCVFSTSTFLLSCTLLVVSPRFNDAFLRGEMSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDSNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGNVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTLFLQGSVCTA 361
BLAST of EWM23853.1 vs. NCBI_GenBank
Match: gi|553182746|ref|XP_005853779.1| (hypothetical protein NGA_0459000 [Nannochloropsis gaditana CCMP526] >gi|422295280|gb|EKU22579.1| hypothetical protein NGA_0459000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 291/296 (98.31%), Postives = 292/296 (98.65%), Query Frame = 0 Query: 66 MSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDSNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGNVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTLFLQGSVCTA 361 MSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTD NGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGG+VDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAV SAASPAQTART AATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGST FLQGSVCTA Sbjct: 1 MSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDGNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGSVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVASAASPAQTARTPAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTAFLQGSVCTA 296
BLAST of EWM23853.1 vs. NCBI_GenBank
Match: gi|585103607|gb|EWM22917.1| (hypothetical protein Naga_101175g1 [Nannochloropsis gaditana]) HSP 1 Score: 92.4337 bits (228), Expect = 3.629e-17 Identity = 58/123 (47.15%), Postives = 68/123 (55.28%), Query Frame = 0 Query: 240 GGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVG-GDAEDGGPACDFYLSCCYAQYVQT-FGSVPTEFVEEVEAACPGSTLFLQGSVCT 360 GG+ A A QT R + FP DYPGLRLGCI DP +CA+KRAAVP G E ACDF+LSCCYAQY + F +P VEE+E ACPG+ L+G VCT Sbjct: 303 GGQKEAMAVEKAAAKKDETPQTGRKNVTEGMNSKAFPFDYPGLRLGCITDPTG-GYCAMKRAAVPSEPLGRTET---ACDFFLSCCYAQYDRMHFDGLPP--VEEIETACPGAKAALRGPVCT 419 The following BLAST results are available for this feature:
BLAST of EWM23853.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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