EWM23853.1, cds6819 (CDS) Nannochloropsis gaditana

Overview
NameEWM23853.1
Unique Namecds6819
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:608727..609812 +

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Properties
Property NameValue
Protein idEWM23853.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100464g6.7487.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:608727..609812 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23853.1 vs. NCBI_GenBank
Match: gi|585105125|gb|EWM23853.1| (hypothetical protein Naga_100464g6 [Nannochloropsis gaditana])

HSP 1 Score: 723.776 bits (1867), Expect = 0.000e+0
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
Query:    1 MLCADGGVFSSRCANFGLITVTIRPYRLSPSAFWMKCVFSTSTFLLSCTLLVVSPRFNDAFLRGEMSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDSNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGNVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTLFLQGSVCTA 361
            MLCADGGVFSSRCANFGLITVTIRPYRLSPSAFWMKCVFSTSTFLLSCTLLVVSPRFNDAFLRGEMSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDSNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGNVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTLFLQGSVCTA
Sbjct:    1 MLCADGGVFSSRCANFGLITVTIRPYRLSPSAFWMKCVFSTSTFLLSCTLLVVSPRFNDAFLRGEMSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDSNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGNVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTLFLQGSVCTA 361          
BLAST of EWM23853.1 vs. NCBI_GenBank
Match: gi|553182746|ref|XP_005853779.1| (hypothetical protein NGA_0459000 [Nannochloropsis gaditana CCMP526] >gi|422295280|gb|EKU22579.1| hypothetical protein NGA_0459000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0
Identity = 291/296 (98.31%), Postives = 292/296 (98.65%), Query Frame = 0
Query:   66 MSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDSNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGNVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTLFLQGSVCTA 361
            MSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTD NGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGG+VDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAV SAASPAQTART AATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGST FLQGSVCTA
Sbjct:    1 MSPRELATVVDLPSISVNVNEDGGVSVSTPWGSVNTDGNGTSVHGFTPTSIGNVTCANLGPWDTAAEPTCETALPAFYESTTTFAGTSKPKIRKITMDTFCTTPCGDTWTRAVFAHSLRCSPGVGGNGSAAGGVVVDVPGAAVSTGPGGSVDVQAPGTTVTRDPGTGAVQVEFPGGRVHAGNGSVAVASAASPAQTARTPAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVGGDAEDGGPACDFYLSCCYAQYVQTFGSVPTEFVEEVEAACPGSTAFLQGSVCTA 296          
BLAST of EWM23853.1 vs. NCBI_GenBank
Match: gi|585103607|gb|EWM22917.1| (hypothetical protein Naga_101175g1 [Nannochloropsis gaditana])

HSP 1 Score: 92.4337 bits (228), Expect = 3.629e-17
Identity = 58/123 (47.15%), Postives = 68/123 (55.28%), Query Frame = 0
Query:  240 GGRVHAGNGSVAVTSAASPAQTARTSAATTSGGPTFPVDYPGLRLGCIKDPKDEEFCAVKRAAVPGVG-GDAEDGGPACDFYLSCCYAQYVQT-FGSVPTEFVEEVEAACPGSTLFLQGSVCT 360
            GG+  A     A        QT R +         FP DYPGLRLGCI DP    +CA+KRAAVP    G  E    ACDF+LSCCYAQY +  F  +P   VEE+E ACPG+   L+G VCT
Sbjct:  303 GGQKEAMAVEKAAAKKDETPQTGRKNVTEGMNSKAFPFDYPGLRLGCITDPTG-GYCAMKRAAVPSEPLGRTET---ACDFFLSCCYAQYDRMHFDGLPP--VEEIETACPGAKAALRGPVCT 419          
The following BLAST results are available for this feature:
BLAST of EWM23853.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585105125|gb|EWM23853.1|0.000e+0100.00hypothetical protein Naga_100464g6 [Nannochloropsi... [more]
gi|553182746|ref|XP_005853779.1|0.000e+098.31hypothetical protein NGA_0459000 [Nannochloropsis ... [more]
gi|585103607|gb|EWM22917.1|3.629e-1747.15hypothetical protein Naga_101175g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6835rna6835Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications