EWM23863.1, cds6803 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|585105139|gb|EWM23863.1| (mad2 mitotic arrest deficient-like 2 [Nannochloropsis gaditana]) HSP 1 Score: 326.635 bits (836), Expect = 2.892e-113 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 Query: 1 MKNNGPLQEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTLIRALAVGGLDDPFPAFRKLLARLSVAEVRDGVCSPPLVMTTHAFPSRQCLN 159 MKNNGPLQEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTLIRALAVGGLDDPFPAFRKLLARLSVAEVRDGVCSPPLVMTTHAFPSRQCLN Sbjct: 1 MKNNGPLQEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTLIRALAVGGLDDPFPAFRKLLARLSVAEVRDGVCSPPLVMTTHAFPSRQCLN 159
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|553189851|ref|XP_005855085.1| (mad2 mitotic arrest deficient-like 2, partial [Nannochloropsis gaditana CCMP526] >gi|422293969|gb|EKU21269.1| mad2 mitotic arrest deficient-like 2, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 176.792 bits (447), Expect = 1.089e-54 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 Query: 49 MSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTLIRALAVGGLDDPFPAFRKLLARLSVAE 135 MSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTLIRALAVGGLDDPFPAFRKLLARLSVAE Sbjct: 1 MSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTLIRALAVGGLDDPFPAFRKLLARLSVAE 87
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|58865782|ref|NP_001012106.1| (mitotic spindle assembly checkpoint protein MAD2B [Rattus norvegicus] >gi|564354077|ref|XP_006239452.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD2B isoform X1 [Rattus norvegicus] >gi|672054511|ref|XP_008762478.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD2B isoform X1 [Rattus norvegicus] >gi|56388614|gb|AAH87687.1| MAD2 mitotic arrest deficient-like 2 (yeast) [Rattus norvegicus]) HSP 1 Score: 99.3673 bits (246), Expect = 9.409e-23 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = 0 Query: 8 QEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTLIRALAVGGLDD 119 Q VL EFLEVAVH +LY R VYP IF++R+KY+VPV MS HP+LN YI + LH + + V+KV+V + D+E H P+E F FE+ P L ++ +GGL Sbjct: 13 QVVADVLSEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLLEKNDVEKVVVVIL----DKE-HRPVEKFVFEITQPPLL--SIKLGGLKQ 117
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|1188111758|ref|XP_020778086.1| (mitotic spindle assembly checkpoint protein MAD2B [Boleophthalmus pectinirostris]) HSP 1 Score: 98.5969 bits (244), Expect = 9.962e-23 Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 0 Query: 13 VLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTLIRALAVGGLDDPFPAFRKLLARLSVAE 135 +L EFLEVA+H +LY R VYP IF++RRKY+VPV MS HPDLN YI + L+ + + +KV+V + +GH P+E F FE+ S PTL+ + L R + ++SV + Sbjct: 18 ILCEFLEVAIHLILYVREVYPSGIFQKRRKYNVPVQMSCHPDLNQYIQDTLYCIKPLIEKNEAEKVVVVIMD-----KGHHPVERFVFEI-SQPTLLSISSETLLSHVEQLLRAFILKISVCD 134
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|1012171525|ref|XP_016004900.1| (PREDICTED: mitotic spindle assembly checkpoint protein MAD2B-like [Rousettus aegyptiacus] >gi|1012171529|ref|XP_016004901.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD2B-like [Rousettus aegyptiacus] >gi|1012171533|ref|XP_016004902.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD2B-like [Rousettus aegyptiacus] >gi|1012171537|ref|XP_016004903.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD2B-like [Rousettus aegyptiacus]) HSP 1 Score: 96.2857 bits (238), Expect = 1.078e-22 Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 0 Query: 8 QEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTL 108 Q VL EFLEVAVH +LY R VYP IF++R+KY+VPV MS HP+LN YI + LH + + V+KV+V + D+E H P+E F FE+ P L Sbjct: 13 QVVADVLCEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLLEKNDVEKVVVVIL----DKE-HRPVEKFVFEITQPPLL 108
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|929228863|ref|XP_013990912.1| (PREDICTED: mitotic spindle assembly checkpoint protein MAD2B [Salmo salar] >gi|929228865|ref|XP_013990913.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD2B [Salmo salar]) HSP 1 Score: 96.6709 bits (239), Expect = 5.292e-22 Identity = 47/101 (46.53%), Postives = 65/101 (64.36%), Query Frame = 0 Query: 8 QEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTL 108 Q +L EFLEVA+H +LY R VYP IF++R+KY+VPV MS HP+LN YIH+ LH + + +KV+V + D+E H P+E F FE++ P L Sbjct: 13 QVVADILCEFLEVAIHLILYVREVYPSGIFQKRKKYNVPVQMSCHPELNQYIHDTLHCVKPLIEKNDAEKVVVVIM----DKEHH-PVERFVFEISQPPLL 108
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|642068123|emb|CDQ89254.1| (unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 96.6709 bits (239), Expect = 5.348e-22 Identity = 47/101 (46.53%), Postives = 65/101 (64.36%), Query Frame = 0 Query: 8 QEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTL 108 Q +L EFLEVA+H +LY R VYP IF++R+KY+VPV MS HP+LN YIH+ LH + + +KV+V + D+E H P+E F FE++ P L Sbjct: 13 QVVADILCEFLEVAIHLILYVREVYPSGIFQKRKKYNVPVQMSCHPELNQYIHDTLHCVKPLIEKNDAEKVVVVIM----DKEHH-PVERFVFEISQPPLL 108
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|4835900|gb|AAD30290.1|AF139365_1 (Mad2B protein [Homo sapiens]) HSP 1 Score: 96.6709 bits (239), Expect = 6.016e-22 Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 8 QEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSP 106 Q AVL EFLEVAVH +LY R VYP IF++R+KY+VPV MS HP+LN YI + LH + + V+KV+V + D+E H P+E F FE+ P Sbjct: 13 QVVAAVLCEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLLEKNDVEKVVVVIL----DKE-HRPVEKFVFEITQPP 106
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|568931920|ref|XP_006539252.1| (PREDICTED: mitotic spindle assembly checkpoint protein MAD2B isoform X3 [Mus musculus]) HSP 1 Score: 95.9005 bits (237), Expect = 6.176e-22 Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 0 Query: 8 QEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTL 108 Q VL EFLEVAVH +LY R VYP IF++R+KY+VPV MS HP+LN YI + LH + + V+KV+V + D+E H P+E F FE+ P L Sbjct: 13 QVVADVLSEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPLLEKNDVEKVVVVIL----DKE-HRPVEKFVFEITQPPLL 108
BLAST of EWM23863.1 vs. NCBI_GenBank
Match: gi|1025125617|ref|XP_016350628.1| (PREDICTED: mitotic spindle assembly checkpoint protein MAD2B [Sinocyclocheilus anshuiensis]) HSP 1 Score: 96.6709 bits (239), Expect = 6.831e-22 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 0 Query: 8 QEATAVLLEFLEVAVHQVLYNRGVYPPAIFERRRKYDVPVFMSRHPDLNLYIHEVLHAAGAMFMEGSVDKVIVTLYGSRSDQEGHAPLESFAFELASSPTL 108 Q +L EFLEVA+H +LY R VYP IF++R+KY+VPV MS HPDLN YI + LH + + +KV+V + D+E H P+E F FE++ P L Sbjct: 13 QVVADILCEFLEVAIHLILYVRDVYPSGIFQKRKKYNVPVQMSCHPDLNQYIQDTLHCVKPLIEKNEAEKVVVVIM----DKE-HRPVERFVFEISQPPLL 108 The following BLAST results are available for this feature:
BLAST of EWM23863.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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