EWM29982.1, cds680 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|585112590|gb|EWM29982.1| (hypothetical protein Naga_100276g10 [Nannochloropsis gaditana]) HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0 Query: 1 MFQRTSLKRAFSGGRSPTNVAFLCLLTSTLHHARAFGPLPPSFWHPSSIDPAATEIKPQSHPPPFRTSTESRPEASVPLPPPRTVKDILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKYLQGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRGGWEGGKEGGGREGGREGRRDIVFMPAHPCGLYHLINGFKTLLSDSCMARCGMSGWGRTRRAG 271 MFQRTSLKRAFSGGRSPTNVAFLCLLTSTLHHARAFGPLPPSFWHPSSIDPAATEIKPQSHPPPFRTSTESRPEASVPLPPPRTVKDILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKYLQGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRGGWEGGKEGGGREGGREGRRDIVFMPAHPCGLYHLINGFKTLLSDSCMARCGMSGWGRTRRAG Sbjct: 1 MFQRTSLKRAFSGGRSPTNVAFLCLLTSTLHHARAFGPLPPSFWHPSSIDPAATEIKPQSHPPPFRTSTESRPEASVPLPPPRTVKDILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKYLQGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRGGWEGGKEGGGREGGREGRRDIVFMPAHPCGLYHLINGFKTLLSDSCMARCGMSGWGRTRRAG 271
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|168014529|ref|XP_001759804.1| (predicted protein [Physcomitrella patens] >gi|162688934|gb|EDQ75308.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-14 Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 0 Query: 88 ILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEK---YLQGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRG 209 + ALDFDGVLC+S ESS +A ++ + +P+L G +A E W+ D++R +RP+VETGYENVLL RL +E +L+ + + D+ W+ ++ L+ + +ELVD+ G Sbjct: 4 LYALDFDGVLCDSCGESSISAVKAAQIRYPELFA-----GMDAATET--WILDTMRVVRPVVETGYENVLLVRLLLEIKAPHLRKTLVAGKLSVDDILADWEHGIKPVLMKEWSENKEELVDLFG 121
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|545708295|ref|XP_005706460.1| (hypothetical protein Gasu_27250 [Galdieria sulphuraria] >gi|452822925|gb|EME29940.1| hypothetical protein Gasu_27250 [Galdieria sulphuraria]) HSP 1 Score: 78.1814 bits (191), Expect = 2.365e-13 Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 0 Query: 79 LPPPRTVKDILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKY---LQGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRG 209 +PP ALDFDGVLC+S E +A +++ WPQ+ P + E P WL L+ LRPLVE GYE +LL L +++ ++ Q + + + ++ W + ++ L Y +ELVD+ G Sbjct: 1 MPPLNKTGVAYALDFDGVLCDSCLELICSAMLAIRSKWPQVLQDLVP----NPLEPPDWLVSKLQKLRPLVEVGYEMILLGLLVVDEQHASIRSQQKSRPLSVGEIMENWHSQIKDQLWREYKTCDKELVDLFG 130
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|702341284|ref|XP_010056396.1| (PREDICTED: uncharacterized protein LOC104444425 [Eucalyptus grandis] >gi|629107961|gb|KCW73107.1| hypothetical protein EUGRSUZ_E01551 [Eucalyptus grandis]) HSP 1 Score: 77.0258 bits (188), Expect = 6.289e-13 Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 0 Query: 87 DILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCME---KYLQGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRG 209 D+ ALDFDGVLC+S ESS +A ++ K WP L G SA E W+ D + +RP+VETGYENVLL RL +E ++ + I + W + ++ ++ +G + LVD+ G Sbjct: 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPGLFD-----GVDSATE--DWIVDQMHIVRPIVETGYENVLLVRLLLEMRMSSIRKSSVAEGLTIDGILESW-SKIKPVIMEEWGENRETLVDLFG 120
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|873224511|emb|CEM26046.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 78.5666 bits (192), Expect = 6.524e-13 Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 0 Query: 79 LPPPRTVK---DILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKYL---QGQGSTPD-------IHITDLAGKWQTHMRSALLHRYGVTAQELV 205 LP PR + +I ALDFDGV+C S +ES +A+ + K +WP+ + + P WL + +RH RP++ETGYE +L+ R +E+ L + G + D + L +W R L+ RYG + +EL+ Sbjct: 75 LPGPRFMAVPPEIFALDFDGVICTSHKESMLSAYAACKALWPERFRW---------DTMPFWLMERVRHARPVIETGYETLLVMRWLVEEMLAVEEQYGYSIDDKPMYFPWRVRMLESEWGPAFRDGLMDRYGASKEELM 205
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|1009162937|ref|XP_015899702.1| (PREDICTED: uncharacterized protein LOC107432983 [Ziziphus jujuba]) HSP 1 Score: 76.6406 bits (187), Expect = 9.269e-13 Identity = 43/126 (34.13%), Postives = 68/126 (53.97%), Query Frame = 0 Query: 87 DILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKY---LQGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRG 209 D+ ALDFDGVLC+S ESS +A ++ K WP L G + W+ D + +RP+VETGYENVLL RL +E ++ + + + + W + ++ ++ +GV L+D+ G Sbjct: 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWPSL------FDGVDST-LEDWIVDQMHIVRPVVETGYENVLLVRLLLETRKPSIRKSSVSEGLTVEGILENW-SKLKPVIIEEWGVQRDALIDLFG 120
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|1050606876|ref|XP_017626001.1| (PREDICTED: uncharacterized protein LOC108469594 [Gossypium arboreum]) HSP 1 Score: 76.2554 bits (186), Expect = 1.274e-12 Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = 0 Query: 87 DILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKYL---QGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRG 209 D+ ALDFDGVLC+S ESS +A ++ K WP L A V W+ D + +RP+VETGYEN+LL RL +E L + + + D+ W + ++ ++ + L+D+ G Sbjct: 3 DLYALDFDGVLCDSCGESSISAVKAAKVRWPDLFDGVASV-------LEDWIVDQMHIVRPVVETGYENLLLVRLLVESRLPSIRKSSVAEGLTVEDILENW-SKIKPVIMEEWDENRDALIDLFG 120
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|308810493|ref|XP_003082555.1| (unnamed protein product [Ostreococcus tauri]) HSP 1 Score: 75.8702 bits (185), Expect = 1.646e-12 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 0 Query: 82 PRTVKDILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKYLQGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVD----VRGGW 211 PR I ALDFDGV+C+SV ESS +A++ ++WP++ + P A + D LR +RP+VETGYEN LAR +EK L G G + D+ +W + L+ R+G+ +V+ +R W Sbjct: 9 PRADGVIFALDFDGVVCDSVGESSLSAWKHGVELWPEV--FDTP----EATTAKPRVLDELRAVRPVVETGYENTTLARALLEK-LDGYG------VEDILNEWD-QISGGLMQRWGLDRAMMVEAFGRIRDDW 128
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|971517087|dbj|GAQ81108.1| (hypothetical protein KFL_000710130 [Klebsormidium nitens]) HSP 1 Score: 75.485 bits (184), Expect = 2.452e-12 Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 0 Query: 86 KDILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKYLQGQGSTP---DIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRG 209 +D+ ALDFDGVLC+S ESS +A+++ WP+L A VG + L+D +R +RP+VETGYEN+LL RL +E ++ ++ I L W+ ++ + +GV + LV++ G Sbjct: 3 QDLYALDFDGVLCDSCGESSLSAWKAAAIQWPEL---FADVGEGVKEKV---LAD-MRTVRPVVETGYENILLVRLLLEMTQPSSNASKVVSELSIAALLTGWEHEVKPVAMAEWGVEKEPLVELFG 122
BLAST of EWM29982.1 vs. NCBI_GenBank
Match: gi|1028948627|ref|XP_016717649.1| (PREDICTED: uncharacterized protein LOC107930494 isoform X3 [Gossypium hirsutum]) HSP 1 Score: 75.0998 bits (183), Expect = 3.172e-12 Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 0 Query: 87 DILALDFDGVLCNSVEESSQAAFRSVKKMWPQLATYCAPVGGASANECPGWLSDSLRHLRPLVETGYENVLLARLCMEKYL---QGQGSTPDIHITDLAGKWQTHMRSALLHRYGVTAQELVDVRG 209 D+ ALDFDGVLC+S ESS +A ++ K WP L V W+ D + +RP+VETGYEN+LL RL +E L + + + D+ W + ++ ++ + L+D+ G Sbjct: 3 DLYALDFDGVLCDSCGESSISAVKAAKVRWPDLFDGVDSV-------LEDWIVDQMHRVRPVVETGYENLLLVRLLVESRLPSIRKSSVAEGLTVEDILENW-SKIKPVIMEEWDENRDALIDLFG 120 The following BLAST results are available for this feature:
BLAST of EWM29982.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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