EWM23890.1, cds6791 (CDS) Nannochloropsis gaditana

Overview
NameEWM23890.1
Unique Namecds6791
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:556330..556372 +
Alignment locationCM002469.1:556692..556805 +
Alignment locationCM002469.1:557122..557314 +
Alignment locationCM002469.1:557451..557619 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23890.1
Productepsin domain-containing protein
Orig transcript idgnl|cribi|Naga_100161g15.9659.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:556330..556372 +
CM002469.1supercontigCM002469.1:556692..556805 +
CM002469.1supercontigCM002469.1:557122..557314 +
CM002469.1supercontigCM002469.1:557451..557619 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006886intracellular protein transport
Vocabulary: INTERPRO
TermDefinition
IPR002014VHS
IPR008942ENTH_VHS
IPR013809ENTH
Homology
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|585105171|gb|EWM23890.1| (epsin domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 360.918 bits (925), Expect = 2.093e-126
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
Query:    1 MRLRHYCRDKFFLVVGRGGPSTFVSGKTHSCSWTLPVAGALANKVFTRQTLRDPNIGNMNLNINLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVREGGKEGGHVK 172
            MRLRHYCRDKFFLVVGRGGPSTFVSGKTHSCSWTLPVAGALANKVFTRQTLRDPNIGNMNLNINLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVREGGKEGGHVK
Sbjct:    1 MRLRHYCRDKFFLVVGRGGPSTFVSGKTHSCSWTLPVAGALANKVFTRQTLRDPNIGNMNLNINLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVREGGKEGGHVK 172          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|553179009|ref|XP_005852634.1| (epsin, partial [Nannochloropsis gaditana CCMP526] >gi|422295896|gb|EKU23195.1| epsin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 160.229 bits (404), Expect = 2.753e-48
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
Query:   85 MEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEE 160
            MEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEE
Sbjct:    1 MEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEE 76          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|953492300|emb|CEG45140.1| (enth domain-containing protein [Plasmopara halstedii])

HSP 1 Score: 127.872 bits (320), Expect = 6.555e-34
Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 0
Query:   65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163
            L+ LKN++D+AK+ +  +  T++E++M EALSNKNWGASSTL+N IA  TYD+E Y  +++ IW ALD  GR WR+++KAL+LLDHL+KNG ERV+E  R+
Sbjct:    6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNDIAQLTYDFEAYGLIMRKIWDALDAEGRQWRTVYKALSLLDHLIKNGTERVIENARD 106          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|567970804|gb|ETK95826.1| (hypothetical protein L915_01289 [Phytophthora parasitica] >gi|567999156|gb|ETL49204.1| hypothetical protein L916_01271 [Phytophthora parasitica] >gi|568028287|gb|ETM02230.1| hypothetical protein L917_01249 [Phytophthora parasitica] >gi|570336820|gb|ETO84768.1| hypothetical protein F444_01359 [Phytophthora parasitica P1976] >gi|570960852|gb|ETP25831.1| hypothetical protein F441_01336 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 128.257 bits (321), Expect = 8.273e-32
Identity = 57/101 (56.44%), Postives = 81/101 (80.20%), Query Frame = 0
Query:   65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163
            L+ LKN++D+AK+ +  +  T++E++M EALSNKNWGASSTL+N+IA  TYDYE Y  +++ IW ALD  GR WR+++KAL+LL+HL+KNG ERV+E  R+
Sbjct:    6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEIAQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARD 106          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|566033120|gb|ETI56031.1| (hypothetical protein F443_01359 [Phytophthora parasitica P1569] >gi|568058910|gb|ETM55508.1| hypothetical protein L914_01280 [Phytophthora parasitica] >gi|570997433|gb|ETP53808.1| hypothetical protein F442_01297 [Phytophthora parasitica P10297])

HSP 1 Score: 128.257 bits (321), Expect = 8.273e-32
Identity = 57/101 (56.44%), Postives = 81/101 (80.20%), Query Frame = 0
Query:   65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163
            L+ LKN++D+AK+ +  +  T++E++M EALSNKNWGASSTL+N+IA  TYDYE Y  +++ IW ALD  GR WR+++KAL+LL+HL+KNG ERV+E  R+
Sbjct:    6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEIAQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARD 106          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|675164271|ref|XP_008891020.1| (hypothetical protein PPTG_01168 [Phytophthora parasitica INRA-310] >gi|568110419|gb|ETN25026.1| hypothetical protein PPTG_01168 [Phytophthora parasitica INRA-310])

HSP 1 Score: 128.257 bits (321), Expect = 9.920e-32
Identity = 57/101 (56.44%), Postives = 81/101 (80.20%), Query Frame = 0
Query:   65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163
            L+ LKN++D+AK+ +  +  T++E++M EALSNKNWGASSTL+N+IA  TYDYE Y  +++ IW ALD  GR WR+++KAL+LL+HL+KNG ERV+E  R+
Sbjct:    6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEIAQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARD 106          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|298714894|emb|CBJ27650.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 120.168 bits (300), Expect = 1.611e-31
Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 0
Query:   80 VPRT-EMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163
            +PR  + EKR++EALSNKNWGASSTL+N IA DTYD+EKY  VL  IW++L  P R WR +FKAL LL+HL+KNGAERV+E+ R+
Sbjct:   55 LPRANDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWTSLQSPSREWRKVFKALCLLEHLIKNGAERVIEDARD 139          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|1173943078|gb|OQR91978.1| (hypothetical protein ACHHYP_04164 [Achlya hypogyna])

HSP 1 Score: 128.642 bits (322), Expect = 1.872e-31
Identity = 57/101 (56.44%), Postives = 77/101 (76.24%), Query Frame = 0
Query:   65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163
            L+  KN +D+AK  +  R  TE E+++ EALSNKNWGASSTL+N++A  TY+YE Y+ ++K +W  +D+  R WR++FKALTLLDHLVKNG ERVVE  R+
Sbjct:    6 LDKFKNALDDAKGAVKARMGTETERKIEEALSNKNWGASSTLLNELAQLTYEYESYNLIMKKVWEGMDVEARQWRTVFKALTLLDHLVKNGTERVVENARD 106          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|301121682|ref|XP_002908568.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103599|gb|EEY61651.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 128.257 bits (321), Expect = 3.056e-31
Identity = 56/101 (55.45%), Postives = 81/101 (80.20%), Query Frame = 0
Query:   65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163
            L+ LKN++D+AK+ +  +  T++E++M EALSNKNWGASSTL+N+I+  TYDYE Y  +++ IW ALD  GR WR+++KAL+LL+HL+KNG ERV+E  R+
Sbjct:    6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEISQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARD 106          
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|698791938|ref|XP_009829001.1| (hypothetical protein H257_05734 [Aphanomyces astaci] >gi|574115658|gb|ETV81143.1| hypothetical protein H257_05734 [Aphanomyces astaci])

HSP 1 Score: 126.331 bits (316), Expect = 1.073e-30
Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 0
Query:   65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163
            ++  KN  D+AK  +  +  T+ EK++ EALSNKNWGASSTL+N+IA  TY+YE Y+ V+K +W A+D  GR WR++FKAL LLDHL+KNG ERVVE  R+
Sbjct:    6 IDKFKNAFDDAKGLVKSKMGTDTEKKLEEALSNKNWGASSTLLNEIAQLTYEYESYNLVMKKVWEAMDAEGRQWRTVFKALALLDHLIKNGTERVVENARD 106          
The following BLAST results are available for this feature:
BLAST of EWM23890.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105171|gb|EWM23890.1|2.093e-126100.00epsin domain-containing protein [Nannochloropsis g... [more]
gi|553179009|ref|XP_005852634.1|2.753e-48100.00epsin, partial [Nannochloropsis gaditana CCMP526] ... [more]
gi|953492300|emb|CEG45140.1|6.555e-3456.44enth domain-containing protein [Plasmopara halsted... [more]
gi|567970804|gb|ETK95826.1|8.273e-3256.44hypothetical protein L915_01289 [Phytophthora para... [more]
gi|566033120|gb|ETI56031.1|8.273e-3256.44hypothetical protein F443_01359 [Phytophthora para... [more]
gi|675164271|ref|XP_008891020.1|9.920e-3256.44hypothetical protein PPTG_01168 [Phytophthora para... [more]
gi|298714894|emb|CBJ27650.1|1.611e-3164.71conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173943078|gb|OQR91978.1|1.872e-3156.44hypothetical protein ACHHYP_04164 [Achlya hypogyna... [more]
gi|301121682|ref|XP_002908568.1|3.056e-3155.45conserved hypothetical protein [Phytophthora infes... [more]
gi|698791938|ref|XP_009829001.1|1.073e-3056.44hypothetical protein H257_05734 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6807rna6807Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications