EWM23890.1, cds6791 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|585105171|gb|EWM23890.1| (epsin domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 360.918 bits (925), Expect = 2.093e-126 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 Query: 1 MRLRHYCRDKFFLVVGRGGPSTFVSGKTHSCSWTLPVAGALANKVFTRQTLRDPNIGNMNLNINLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVREGGKEGGHVK 172 MRLRHYCRDKFFLVVGRGGPSTFVSGKTHSCSWTLPVAGALANKVFTRQTLRDPNIGNMNLNINLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVREGGKEGGHVK Sbjct: 1 MRLRHYCRDKFFLVVGRGGPSTFVSGKTHSCSWTLPVAGALANKVFTRQTLRDPNIGNMNLNINLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVREGGKEGGHVK 172
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|553179009|ref|XP_005852634.1| (epsin, partial [Nannochloropsis gaditana CCMP526] >gi|422295896|gb|EKU23195.1| epsin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 160.229 bits (404), Expect = 2.753e-48 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 Query: 85 MEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEE 160 MEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEE Sbjct: 1 MEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEE 76
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|953492300|emb|CEG45140.1| (enth domain-containing protein [Plasmopara halstedii]) HSP 1 Score: 127.872 bits (320), Expect = 6.555e-34 Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 0 Query: 65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163 L+ LKN++D+AK+ + + T++E++M EALSNKNWGASSTL+N IA TYD+E Y +++ IW ALD GR WR+++KAL+LLDHL+KNG ERV+E R+ Sbjct: 6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNDIAQLTYDFEAYGLIMRKIWDALDAEGRQWRTVYKALSLLDHLIKNGTERVIENARD 106
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|567970804|gb|ETK95826.1| (hypothetical protein L915_01289 [Phytophthora parasitica] >gi|567999156|gb|ETL49204.1| hypothetical protein L916_01271 [Phytophthora parasitica] >gi|568028287|gb|ETM02230.1| hypothetical protein L917_01249 [Phytophthora parasitica] >gi|570336820|gb|ETO84768.1| hypothetical protein F444_01359 [Phytophthora parasitica P1976] >gi|570960852|gb|ETP25831.1| hypothetical protein F441_01336 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 128.257 bits (321), Expect = 8.273e-32 Identity = 57/101 (56.44%), Postives = 81/101 (80.20%), Query Frame = 0 Query: 65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163 L+ LKN++D+AK+ + + T++E++M EALSNKNWGASSTL+N+IA TYDYE Y +++ IW ALD GR WR+++KAL+LL+HL+KNG ERV+E R+ Sbjct: 6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEIAQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARD 106
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|566033120|gb|ETI56031.1| (hypothetical protein F443_01359 [Phytophthora parasitica P1569] >gi|568058910|gb|ETM55508.1| hypothetical protein L914_01280 [Phytophthora parasitica] >gi|570997433|gb|ETP53808.1| hypothetical protein F442_01297 [Phytophthora parasitica P10297]) HSP 1 Score: 128.257 bits (321), Expect = 8.273e-32 Identity = 57/101 (56.44%), Postives = 81/101 (80.20%), Query Frame = 0 Query: 65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163 L+ LKN++D+AK+ + + T++E++M EALSNKNWGASSTL+N+IA TYDYE Y +++ IW ALD GR WR+++KAL+LL+HL+KNG ERV+E R+ Sbjct: 6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEIAQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARD 106
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|675164271|ref|XP_008891020.1| (hypothetical protein PPTG_01168 [Phytophthora parasitica INRA-310] >gi|568110419|gb|ETN25026.1| hypothetical protein PPTG_01168 [Phytophthora parasitica INRA-310]) HSP 1 Score: 128.257 bits (321), Expect = 9.920e-32 Identity = 57/101 (56.44%), Postives = 81/101 (80.20%), Query Frame = 0 Query: 65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163 L+ LKN++D+AK+ + + T++E++M EALSNKNWGASSTL+N+IA TYDYE Y +++ IW ALD GR WR+++KAL+LL+HL+KNG ERV+E R+ Sbjct: 6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEIAQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARD 106
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|298714894|emb|CBJ27650.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 120.168 bits (300), Expect = 1.611e-31 Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 0 Query: 80 VPRT-EMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163 +PR + EKR++EALSNKNWGASSTL+N IA DTYD+EKY VL IW++L P R WR +FKAL LL+HL+KNGAERV+E+ R+ Sbjct: 55 LPRANDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEKYGIVLPLIWTSLQSPSREWRKVFKALCLLEHLIKNGAERVIEDARD 139
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|1173943078|gb|OQR91978.1| (hypothetical protein ACHHYP_04164 [Achlya hypogyna]) HSP 1 Score: 128.642 bits (322), Expect = 1.872e-31 Identity = 57/101 (56.44%), Postives = 77/101 (76.24%), Query Frame = 0 Query: 65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163 L+ KN +D+AK + R TE E+++ EALSNKNWGASSTL+N++A TY+YE Y+ ++K +W +D+ R WR++FKALTLLDHLVKNG ERVVE R+ Sbjct: 6 LDKFKNALDDAKGAVKARMGTETERKIEEALSNKNWGASSTLLNELAQLTYEYESYNLIMKKVWEGMDVEARQWRTVFKALTLLDHLVKNGTERVVENARD 106
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|301121682|ref|XP_002908568.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103599|gb|EEY61651.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 128.257 bits (321), Expect = 3.056e-31 Identity = 56/101 (55.45%), Postives = 81/101 (80.20%), Query Frame = 0 Query: 65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163 L+ LKN++D+AK+ + + T++E++M EALSNKNWGASSTL+N+I+ TYDYE Y +++ IW ALD GR WR+++KAL+LL+HL+KNG ERV+E R+ Sbjct: 6 LDKLKNVMDDAKSAVKAKMGTDVERKMEEALSNKNWGASSTLLNEISQLTYDYEAYGVIMRKIWEALDAEGRQWRAVYKALSLLEHLIKNGTERVIENARD 106
BLAST of EWM23890.1 vs. NCBI_GenBank
Match: gi|698791938|ref|XP_009829001.1| (hypothetical protein H257_05734 [Aphanomyces astaci] >gi|574115658|gb|ETV81143.1| hypothetical protein H257_05734 [Aphanomyces astaci]) HSP 1 Score: 126.331 bits (316), Expect = 1.073e-30 Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 0 Query: 65 LESLKNMVDEAKNQIVPR--TEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEKYHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRE 163 ++ KN D+AK + + T+ EK++ EALSNKNWGASSTL+N+IA TY+YE Y+ V+K +W A+D GR WR++FKAL LLDHL+KNG ERVVE R+ Sbjct: 6 IDKFKNAFDDAKGLVKSKMGTDTEKKLEEALSNKNWGASSTLLNEIAQLTYEYESYNLVMKKVWEAMDAEGRQWRTVFKALALLDHLIKNGTERVVENARD 106 The following BLAST results are available for this feature:
BLAST of EWM23890.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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