EWM23891.1, cds6790 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|585105172|gb|EWM23891.1| (Protein of unknown function DUF501 [Nannochloropsis gaditana]) HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query: 1 MMLTLPIYSDKASKVLGFGHALRSLFNVAAPLSLEQGAHFSRTQKPSDKRRKRLSQVLSVSSAAFTPSSTGSKAATAAIDPDHFDIPPFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTHDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARRREHRERGVDEYGDGEEDARQKGSNEEQRGTAAG 341
MMLTLPIYSDKASKVLGFGHALRSLFNVAAPLSLEQGAHFSRTQKPSDKRRKRLSQVLSVSSAAFTPSSTGSKAATAAIDPDHFDIPPFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTHDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARRREHRERGVDEYGDGEEDARQKGSNEEQRGTAAG
Sbjct: 1 MMLTLPIYSDKASKVLGFGHALRSLFNVAAPLSLEQGAHFSRTQKPSDKRRKRLSQVLSVSSAAFTPSSTGSKAATAAIDPDHFDIPPFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTHDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARRREHRERGVDEYGDGEEDARQKGSNEEQRGTAAG 341
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|553179015|ref|XP_005852636.1| (hypothetical protein NGA_0716200 [Nannochloropsis gaditana CCMP526] >gi|422295898|gb|EKU23197.1| hypothetical protein NGA_0716200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0 Identity = 325/389 (83.55%), Postives = 329/389 (84.58%), Query Frame = 0
Query: 12 ASKVLGFGHALRSLFNVAAPLSLEQGAHFSRTQKPSDKRRKRLSQVLSVSSAAFTPSSTGSKAATAAIDPDHFDIPPFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQ----------------------GGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCT-------------------------------------HDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARRREHRERGVDEYGDGEEDARQKGSNEEQRGTAAG 341
+SKVLGFGHALRSLFNVAAPLSLEQGAHFSRTQ+PSDKRRKRLSQVLSVSSAAFTP STGSKAATAAIDPDHFDIPPFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQ GGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCT +DNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARR+EHRERGVDEYGDGEEDARQKGSNEEQRGTAAG
Sbjct: 31 SSKVLGFGHALRSLFNVAAPLSLEQGAHFSRTQQPSDKRRKRLSQVLSVSSAAFTPLSTGSKAATAAIDPDHFDIPPFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQVALCFRVGSPIHPFPSLPSLPPGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTRTGGGEGKGWGRGGAMLRAKEDVALAYRDISVALLSGYDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARRKEHRERGVDEYGDGEEDARQKGSNEEQRGTAAG 419
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|299116385|emb|CBN74650.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 168.318 bits (425), Expect = 1.880e-46 Identity = 86/186 (46.24%), Postives = 109/186 (58.60%), Query Frame = 0
Query: 121 CAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLC--THDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRR 304
C HGFPQAF F P +SGLFRLSCPLLV+A+D E +GG+++ N +L ++ +F VN H +RR LV P+ + E +G+ G + L SGI GV+P K D KCLHAH+AD L NAIG E L R + +G C +QCN E T SW Y P KNKQKL+ R RR
Sbjct: 8 CRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLEDEGGIEDVNARLASEEGLREDFMAVNLAHGMLRRRLVTPDKMGLVEETIGKEGAGRFLDSGITGVTPGKVRDAKCLHAHVADALMRGRSANAIGRATLELLEA-RGVRTDGGDRCSEQCNYLVEETADSWRYTPQKNKQKLQMRKVRR 192
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|551583035|ref|XP_005776954.1| (hypothetical protein EMIHUDRAFT_463509 [Emiliania huxleyi CCMP1516] >gi|485629145|gb|EOD24525.1| hypothetical protein EMIHUDRAFT_463509 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 144.821 bits (364), Expect = 1.569e-35 Identity = 98/262 (37.40%), Postives = 137/262 (52.29%), Query Frame = 0
Query: 93 PASDEDIACIEQRQLGH-PITCAGGPRQRCAHGFPQAFIFHPT---------KTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEK---SPAMQREFRRVNARHSAIRRGLVD---PEGLRSYVE-------------KLGEAGV----------------EQILASGIAGVSPTKTGDLKCLHAHLADYLC-THDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARR 308
P S D+ +E RQLG+ P A G RC HG PQAF++ P + +SGLFRLSCPLLV+AVD +EA+G +++ ++++ S + + N RH+ RR LV E L+ E K AG E +L SG+AG SP+K ++KCLHA LAD+LC H N +GE + + R + V G+++C QQC+ R ++WWY PVKNKQKL +R RR R+
Sbjct: 59 PVSASDMGALE-RQLGYRPYPLAVG--ARCVHGHPQAFVWDPLARFHGGRARRAPLDSGLFRLSCPLLVQAVDRWEAEGAVRQLQAEVDEGRVSECSRADLEEANRRHALARRALVGNRLEEALQRSREADAAAPPPPPPRRKRTGAGAKSGARPPRALSREELSELVLNSGVAGQSPSKP-EVKCLHAQLADHLCRDHSNPLGEAILSGV-AARGVAVHGDSQCHQQCDCGVAREAATWWYTPVKNKQKLFTRLERRKQRQ 315
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|551627124|ref|XP_005793543.1| (hypothetical protein EMIHUDRAFT_462020 [Emiliania huxleyi CCMP1516] >gi|485648205|gb|EOD41114.1| hypothetical protein EMIHUDRAFT_462020 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 144.436 bits (363), Expect = 2.062e-35 Identity = 98/262 (37.40%), Postives = 137/262 (52.29%), Query Frame = 0
Query: 93 PASDEDIACIEQRQLGH-PITCAGGPRQRCAHGFPQAFIFHPT---------KTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEK---SPAMQREFRRVNARHSAIRRGLVDP---EGLRSYVE-------------KLGEAGV----------------EQILASGIAGVSPTKTGDLKCLHAHLADYLC-THDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARR 308
P S D+ +E RQLG+ P A G RC HG PQAF++ P + +SGLFRLSCPLLV+AVD +EA+G +++ ++++ S + + N RH+ RR LV E L+ E K AG E +L SG+AG SP+K ++KCLHA LAD+LC H N +GE + + R + V G+++C QQC+ R ++WWY PVKNKQKL +R RR R+
Sbjct: 59 PVSVSDMGALE-RQLGYRPYPLAVG--ARCVHGHPQAFVWDPLARFHGGRARRAPLDSGLFRLSCPLLVQAVDRWEAEGAVRQLQAEVDEGRVSECSRADLEEANRRHALARRALVGSRLEEALQRSREADAAAPPPPPPRRKRTGAGAKSGARPPRALSREELSELVLNSGVAGQSPSKP-EVKCLHAQLADHLCRDHSNPLGEAILSGV-AARGVAVHGDSQCHQQCDCGVAREAATWWYTPVKNKQKLFTRLERRKQRQ 315
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|676390061|ref|XP_009038309.1| (hypothetical protein AURANDRAFT_65195 [Aureococcus anophagefferens] >gi|323451197|gb|EGB07075.1| hypothetical protein AURANDRAFT_65195 [Aureococcus anophagefferens]) HSP 1 Score: 146.747 bits (369), Expect = 3.505e-35 Identity = 91/230 (39.57%), Postives = 126/230 (54.78%), Query Frame = 0
Query: 93 PASDEDIACIEQRQLGHPITCAGGPRQR-CAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFR----RVNARHSAIRRGLVD-PEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTHDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARRREHRERGV 316
P + D+ IE QLGH G P C GFPQA + P+ F +GL RL+CP L +A+D +E ++ ++ L A + R RVNARH+A RR LV+ + R VE+LGE + SGIAG+S K D+KCLHA +AD L + DNA+G+ + + L R ++V G+ C +QC+ W Y P KNKQKL + RR +E R+RGV
Sbjct: 40 PPAAPDVEAIEAHQLGHRTQTIGVPAASLCRRGFPQATLQDPSVHKFGAGLVRLTCPHLCEAIDAWERDDAVRTVSKALLVDGADASKHRDSLDRVNARHAATRRSLVEGTDAERRAVERLGEDAFSHAMGSGIAGISQGKLEDVKCLHAQVADELLSGDNALGKAILDGL-GARGVDVAGSPTCHEQCS----GCDGGWRYTPTKNKQKLWT-TKRRHKELQELRKRGV 263
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|397631724|gb|EJK70270.1| (hypothetical protein THAOC_08386, partial [Thalassiosira oceanica]) HSP 1 Score: 144.436 bits (363), Expect = 1.400e-34 Identity = 84/206 (40.78%), Postives = 116/206 (56.31%), Query Frame = 0
Query: 121 CAHGFPQAFIFHPTKTTFN-SGLFRLSCPLLVKAVDEFEAQGGLQEF------NRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEK-LGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTHD--------------NAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRR 304
C HG+PQ+F FHPTK SGLFRLSCPLLV+A+D++E +GG+++ + + + Q F N +R+ L G SY+ K LGE E+ L SGIAG+ ++T ++KC+HAH+AD+LC N IGE L +R E+ GN CWQQCN + +R S W Y P KN+QKL++ RR
Sbjct: 688 CLHGYPQSFGFHPTKGPKPVSGLFRLSCPLLVEAIDQWEGEGGVRQMTDWLRSDDRFHNASRKQDGFETANRIQKKVRKELA--RGDLSYLSKRLGEFNSERFLDSGIAGIPSSQTFNVKCIHAHVADHLCRRSRDLDSADIENADRGNIIGEHALRIL-GDRGTEICGNEVCWQQCNCNRKRVDSDWSYRPKKNRQKLKTTSERR 890
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|145356674|ref|XP_001422552.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582795|gb|ABP00869.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 97.0561 bits (240), Expect = 8.224e-20 Identity = 70/201 (34.83%), Postives = 102/201 (50.75%), Query Frame = 0
Query: 94 ASDEDIACIEQRQLGHPITCA-GGPRQRCAHGFPQAFIFHPTKTTFNSG---------LFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILA-SGIAGVS-----PTKT-GDLKCLHAHLADYLCTH--DNAIGEEVYEHLRTNRQIEVEGNAECWQQC 275
ASDE A ++QLGH A GG +RC HG+ +A ++ P TT L RLSCP L++AVD +E +GG+ + ++ + R + +R LV E S + GE + I+ +G+ GVS KT +KCLHAH+AD L NA+G + LRT R ++V+G ECW++C
Sbjct: 47 ASDEATA---RKQLGHACAQAIGGEARRCRHGYSRALLYAPASTTTTDARAALKAEHALSRLSCPELIEAVDAWEREGGIHAVAAACDADESLFQSLERAHRDAPRVRNWLVGEE--TSARVREGETKTDFIVNRTGLVGVSLEALTSQKTWKKVKCLHAHIADTLVRGRGKNAVGAFALDVLRTRRGVDVDGTPECWRRC 242
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|501768533|ref|WP_012635013.1| (DUF501 domain-containing protein [Halothermothrix orenii] >gi|219992211|gb|ACL68814.1| uncharacterized conserved protein [Halothermothrix orenii H 168]) HSP 1 Score: 78.9518 bits (193), Expect = 7.262e-14 Identity = 53/159 (33.33%), Postives = 82/159 (51.57%), Query Frame = 0
Query: 102 IEQRQLGHPITCAGGPRQRCAHGFPQAFIFHP---TKTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTHDNAIGEEVYEHL 257
I ++QLG GG +C P + P K F + F LSCP LVK V E +G ++E K+ K+PA++ E R + ++ RR L+ + + + + + ++ +L SG+ G+ K G +KCLH HLADYL N +G V+E L
Sbjct: 10 IIRKQLGREPDNLGGIPLKCPFEKPAVLLTLPYSSDKGIFPTT-FWLSCPYLVKEVSRLEEKGLVKELTEKINKNPALKEELERAHKIYAQKRRSLLGEDEV-AELRRGSPDILKVLLESGVGGIR-NKEG-IKCLHTHLADYLVNGVNPVGRLVWEKL 164
BLAST of EWM23891.1 vs. NCBI_GenBank
Match: gi|1119868794|ref|WP_072757608.1| (DUF501 domain-containing protein [Fervidobacterium gondwanense] >gi|1109676959|emb|SHN51167.1| hypothetical protein SAMN02745226_00323 [Fervidobacterium gondwanense DSM 13020]) HSP 1 Score: 77.7962 bits (190), Expect = 1.538e-13 Identity = 62/185 (33.51%), Postives = 91/185 (49.19%), Query Frame = 0
Query: 94 ASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKT--TFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFRRVNARHSAI---RRGLVDPEGLRSYVEKLGEAGVEQILAS-GIAGVSPTKTGDLKCLHAHLADYLCTHDNAIGEEVYEHLRTNRQIEVEGNAECW 272
SD+D+ I +QL + + C+ GFP + +P + F + + L+CP LVK V + E QG ++++ R +E + R F R+ H + R L+ PE ++ + +LAS G G+ KT LKCLH HLADYL DN IGE VY QIE + EC+
Sbjct: 4 VSDKDLNII-AKQLDRNVENVLSVERYCSFGFPVVILSYPVRNGKPFPT-IHYLTCPHLVKEVSKLEEQGYVKKYERLIEDNI---RFFSRLEQAHKDVIKKRMSLLKPE----------DSEWDAVLASSGTGGIRNWKT--LKCLHLHLADYLAGIDNPIGELVY------NQIEKKECGECY 165 The following BLAST results are available for this feature:
BLAST of EWM23891.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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