EWM23893.1, cds6789 (CDS) Nannochloropsis gaditana

Overview
NameEWM23893.1
Unique Namecds6789
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:551946..553721 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23893.1
Product6-4 photolyase
Orig transcript idgnl|cribi|Naga_100161g13.9662.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:551946..553721 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003913DNA photolyase activity
Vocabulary: INTERPRO
TermDefinition
IPR005101Photolyase_FAD-bd/Cryptochr_C
IPR006050DNA_photolyase_N
IPR014729Rossmann-like_a/b/a_fold
Homology
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|585105174|gb|EWM23893.1| (6-4 photolyase [Nannochloropsis gaditana])

HSP 1 Score: 1223.38 bits (3164), Expect = 0.000e+0
Identity = 591/591 (100.00%), Postives = 591/591 (100.00%), Query Frame = 0
Query:    1 MPWKFLLTLALAISLSLAYLPRSASFVRPITMTSTAVSKPAAKGAARTVSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDGKGGKTKKRA 591
            MPWKFLLTLALAISLSLAYLPRSASFVRPITMTSTAVSKPAAKGAARTVSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDGKGGKTKKRA
Sbjct:    1 MPWKFLLTLALAISLSLAYLPRSASFVRPITMTSTAVSKPAAKGAARTVSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDGKGGKTKKRA 591          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|553179018|ref|XP_005852637.1| (cryptochrome [Nannochloropsis gaditana CCMP526] >gi|422295899|gb|EKU23198.1| cryptochrome [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1151.73 bits (2978), Expect = 0.000e+0
Identity = 555/560 (99.11%), Postives = 557/560 (99.46%), Query Frame = 0
Query:   32 MTSTAVSKPAAKGAARTVSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDGKGGKTKKRA 591
            MTSTAVSKP AKGAARTVSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGV+KLTFESDTEPYAKVRDRHVCELAA+HQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPA EYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVP LSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDGKGGKTKKRA
Sbjct:    1 MTSTAVSKPGAKGAARTVSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVSKLTFESDTEPYAKVRDRHVCELAAKHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPAPEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPDLSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDGKGGKTKKRA 560          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|919094575|ref|XP_013384158.1| (PREDICTED: cryptochrome-1-like isoform X1 [Lingula anatina])

HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0
Identity = 300/535 (56.07%), Postives = 365/535 (68.22%), Query Frame = 0
Query:   50 SLHWFRKGLRLHDNPALLEAC-EGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETD-APTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDG 582
            +LHWFRKGLRLHDNPALL AC +      P+FILDP F K   +GV R+RF+LQ +K+LDD+L+++ SRLFV+KG+P E  P++F+EWG+T+LTFE DTEPYA+VRD  + +LA EH V V    SHTL+D E  +AR  G   P  YQ F  + + +G              PP   E L+ +          H  G           D+ VP L  +     D    ++PGGET AL RM+ +L    +I  FEKPKT PN+L PSTTVLSPYLK G LS+RLF+H L+ I  Q K  H+QPPVSL GQLLWREFFY  G    NFD+M GNP+CRQIPW    E + AW  ARTGYPFIDA MTQLR+EGWIHHLARHA+ACFLTRGDLW SWEEG +VFE+ LLDADWS+N GNW WLSASAFFHQYFRVYSP+AFG KTD +GEYI+KYLP+L+K P +YIYEPWKAP+ +QE AGC++G+DYP P+VDH  +SK  + KM AAY  NK+      EK   KKR +  D 
Sbjct:   38 TLHWFRKGLRLHDNPALLAACTKDCAEFRPIFILDPWFVKNARVGVNRWRFLLQALKDLDDSLKKLKSRLFVLKGKPHEVFPKIFKEWGITRLTFEVDTEPYARVRDAEIIKLAKEHNVEVIQKISHTLYDTEKVIAR-NGGSAPLTYQRFQTVLSQLGA-------------PPRTAETLTSE----------HLKGCITPVTADHDQDYGVPTLKDLKVDTADMGEVVFPGGETEALKRMERYLKKSNWICNFEKPKTEPNSLEPSTTVLSPYLKFGCLSARLFWHRLQEIYKQCKK-HSQPPVSLHGQLLWREFFYTAGLGVANFDRMEGNPVCRQIPWENKPEYIEAWTHARTGYPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDPQGEYIKKYLPMLKKFPKEYIYEPWKAPRAMQEKAGCIIGKDYPRPIVDHGEISKVNIKKMAAAYALNKDQN--ATEKGTPKKRKSEADA 545          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|919078125|ref|XP_013420209.1| (PREDICTED: cryptochrome-1-like isoform X1 [Lingula anatina])

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 299/535 (55.89%), Postives = 365/535 (68.22%), Query Frame = 0
Query:   50 SLHWFRKGLRLHDNPALLEAC-EGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETD-APTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDG 582
            +LHWFRKGLRLHDNPALL AC +      P+FILDP F K   +GV R+RF+LQ +K+LDD+L+++ SRLFV+KG+P E  P++F+EWG+T+LTFE DTEPYA+VRD  + +LA EH V V    SHTL+D E  +AR  G   P  YQ F  + + +G              PP   E L+ +          H  G           ++ VP L  +     D    ++PGGET AL RM+ +L    +I  FEKPKT PN+L PSTTVLSPYLK G LS+RLF+H L+ I  Q K  H+QPPVSL GQLLWREFFY  G    NFD+M GNP+CRQIPW    E + AW  ARTGYPFIDA MTQLR+EGWIHHLARHA+ACFLTRGDLW SWEEG +VFE+ LLDADWS+N GNW WLSASAFFHQYFRVYSP+AFG KTD +GEYI+KYLP+L+K P +YIYEPWKAP+ +QE AGC++G+DYP P+VDH  +SK  + KM AAY  NK+      EK   KKR +  D 
Sbjct:  140 TLHWFRKGLRLHDNPALLAACTKDCAEFRPIFILDPWFVKNARVGVNRWRFLLQALKDLDDSLKKLNSRLFVLKGKPHEVFPKIFKEWGITRLTFEVDTEPYARVRDAEIIKLAKEHNVEVIQKISHTLYDTEKVIAR-NGGSAPLTYQRFQTVLSQLGA-------------PPRTAETLTSE----------HLKGCITPVTADHDQEYGVPTLKDLKVDTADMGEVVFPGGETEALKRMERYLKKSNWICNFEKPKTEPNSLEPSTTVLSPYLKFGCLSARLFWHRLQEIYKQCKK-HSQPPVSLHGQLLWREFFYTAGLGVANFDRMEGNPVCRQIPWENKPEYIEAWTHARTGYPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDPQGEYIKKYLPMLKKFPKEYIYEPWKAPRAMQEKAGCIIGKDYPKPIVDHGEISKVNIKKMAAAYALNKDQN--ATEKGTPKKRKSEADA 647          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|919094577|ref|XP_013384159.1| (PREDICTED: cryptochrome-1-like isoform X2 [Lingula anatina])

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 300/535 (56.07%), Postives = 365/535 (68.22%), Query Frame = 0
Query:   50 SLHWFRKGLRLHDNPALLEAC-EGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETD-APTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDG 582
            +LHWFRKGLRLHDNPALL AC +      P+FILDP F K   +GV R+RF+LQ +K+LDD+L+++ SRLFV+KG+P E  P++F+EWG+T+LTFE DTEPYA+VRD  + +LA EH V V    SHTL+D E  +AR  G   P  YQ F  + + +G              PP   E L+ +          H  G           D+ VP L  +     D    ++PGGET AL RM+ +L    +I  FEKPKT PN+L PSTTVLSPYLK G LS+RLF+H L+ I  Q K  H+QPPVSL GQLLWREFFY  G    NFD+M GNP+CRQIPW    E + AW  ARTGYPFIDA MTQLR+EGWIHHLARHA+ACFLTRGDLW SWEEG +VFE+ LLDADWS+N GNW WLSASAFFHQYFRVYSP+AFG KTD +GEYI+KYLP+L+K P +YIYEPWKAP+ +QE AGC++G+DYP P+VDH  +SK  + KM AAY  NK+      EK   KKR +  D 
Sbjct:    9 TLHWFRKGLRLHDNPALLAACTKDCAEFRPIFILDPWFVKNARVGVNRWRFLLQALKDLDDSLKKLKSRLFVLKGKPHEVFPKIFKEWGITRLTFEVDTEPYARVRDAEIIKLAKEHNVEVIQKISHTLYDTEKVIAR-NGGSAPLTYQRFQTVLSQLGA-------------PPRTAETLTSE----------HLKGCITPVTADHDQDYGVPTLKDLKVDTADMGEVVFPGGETEALKRMERYLKKSNWICNFEKPKTEPNSLEPSTTVLSPYLKFGCLSARLFWHRLQEIYKQCKK-HSQPPVSLHGQLLWREFFYTAGLGVANFDRMEGNPVCRQIPWENKPEYIEAWTHARTGYPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDPQGEYIKKYLPMLKKFPKEYIYEPWKAPRAMQEKAGCIIGKDYPRPIVDHGEISKVNIKKMAAAYALNKDQN--ATEKGTPKKRKSEADA 516          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|919078127|ref|XP_013420210.1| (PREDICTED: cryptochrome-1-like isoform X2 [Lingula anatina])

HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0
Identity = 299/535 (55.89%), Postives = 365/535 (68.22%), Query Frame = 0
Query:   50 SLHWFRKGLRLHDNPALLEAC-EGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETD-APTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDG 582
            +LHWFRKGLRLHDNPALL AC +      P+FILDP F K   +GV R+RF+LQ +K+LDD+L+++ SRLFV+KG+P E  P++F+EWG+T+LTFE DTEPYA+VRD  + +LA EH V V    SHTL+D E  +AR  G   P  YQ F  + + +G              PP   E L+ +          H  G           ++ VP L  +     D    ++PGGET AL RM+ +L    +I  FEKPKT PN+L PSTTVLSPYLK G LS+RLF+H L+ I  Q K  H+QPPVSL GQLLWREFFY  G    NFD+M GNP+CRQIPW    E + AW  ARTGYPFIDA MTQLR+EGWIHHLARHA+ACFLTRGDLW SWEEG +VFE+ LLDADWS+N GNW WLSASAFFHQYFRVYSP+AFG KTD +GEYI+KYLP+L+K P +YIYEPWKAP+ +QE AGC++G+DYP P+VDH  +SK  + KM AAY  NK+      EK   KKR +  D 
Sbjct:    9 TLHWFRKGLRLHDNPALLAACTKDCAEFRPIFILDPWFVKNARVGVNRWRFLLQALKDLDDSLKKLNSRLFVLKGKPHEVFPKIFKEWGITRLTFEVDTEPYARVRDAEIIKLAKEHNVEVIQKISHTLYDTEKVIAR-NGGSAPLTYQRFQTVLSQLGA-------------PPRTAETLTSE----------HLKGCITPVTADHDQEYGVPTLKDLKVDTADMGEVVFPGGETEALKRMERYLKKSNWICNFEKPKTEPNSLEPSTTVLSPYLKFGCLSARLFWHRLQEIYKQCKK-HSQPPVSLHGQLLWREFFYTAGLGVANFDRMEGNPVCRQIPWENKPEYIEAWTHARTGYPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDPQGEYIKKYLPMLKKFPKEYIYEPWKAPRAMQEKAGCIIGKDYPKPIVDHGEISKVNIKKMAAAYALNKDQN--ATEKGTPKKRKSEADA 516          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|514694862|ref|XP_004995002.1| (DNA photolyase [Salpingoeca rosetta] >gi|326437928|gb|EGD83498.1| DNA photolyase [Salpingoeca rosetta])

HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0
Identity = 305/551 (55.35%), Postives = 377/551 (68.42%), Query Frame = 0
Query:   49 VSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKD-VPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDAP--TLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEG------GGKGGEKSG--EKKRPAGEDGKGGKTK 588
            VS+HWFRKGLRLHDN ALL A +GA  VYPVF+LDPHFAKP+ +GV+RY F+L+++++LD +LR +GSRL+V+KG+P +AL   F+EW VT+LTFE DTEPYAK+RD    ELA +H + V T   HTLHDPE Y+A+  G D +P  Y SF  LF  +G V    S    +  P                Q +     + +++ R     F VP L  +GY   D      +PGGET AL RM+ HL    +I  FEKPKTSPN L PSTT LSPYLK G LS RLFYH L  + A+++  H +PPVSL GQLLWREFF++ G+A  NFD+M GN ICRQI W  N  LL AWE ARTGYP+IDACMTQLR EGW+HHLARHA+ACFLTRGDL+QSWE+GA+VF++ L+DADW +N+ NW+WLS S+FF+QYFRVYSPVAFG KTD  G YIRKYLP L+  P KYIYEPWKAP GVQ + GC++G+DYP P+VDHA VS     +++A YDA K+         K  + SG   K+  A    K  KTK
Sbjct:    6 VSIHWFRKGLRLHDNAALLAALKGAKQVYPVFVLDPHFAKPEFVGVVRYNFLLESLRDLDKSLRTLGSRLYVLKGKPLQALEEKFKEWEVTRLTFERDTEPYAKLRDTQARELAEKHGIEVITTVGHTLHDPEQYIAKAGGADKIPLTYSSFGTLFRRLGKVPAALSAPTKEDFP----------------QSSTLVRTDALDDHR-----FDVPSLKDMGYEWNDDEHEVRFPGGETEALERMRRHLQRKAWIAHFEKPKTSPNTLEPSTTGLSPYLKFGCLSPRLFYHELARVYAEYRD-HAKPPVSLHGQLLWREFFHMCGYAVKNFDRMEGNRICRQIDWDTNDALLAAWENARTGYPWIDACMTQLRREGWLHHLARHAVACFLTRGDLYQSWEKGAQVFDRLLVDADWHLNSANWMWLSCSSFFYQYFRVYSPVAFGKKTDPSGAYIRKYLPQLKAFPDKYIYEPWKAPPGVQRSCGCIIGKDYPEPIVDHAEVSAANKARIRACYDALKQAEKAKKTTTKDAKSSGGASKRSSAQSSAKLKKTK 534          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|908409475|ref|XP_013065766.1| (PREDICTED: cryptochrome-1-like isoform X1 [Biomphalaria glabrata] >gi|908409477|ref|XP_013065767.1| PREDICTED: cryptochrome-1-like isoform X1 [Biomphalaria glabrata] >gi|908409479|ref|XP_013065768.1| PREDICTED: cryptochrome-1-like isoform X1 [Biomphalaria glabrata] >gi|908409481|ref|XP_013065769.1| PREDICTED: cryptochrome-1-like isoform X1 [Biomphalaria glabrata])

HSP 1 Score: 596.275 bits (1536), Expect = 0.000e+0
Identity = 301/543 (55.43%), Postives = 365/543 (67.22%), Query Frame = 0
Query:   51 LHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDA-PTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGEDGKGGK-TKKRA 591
            +HWFRKGLRLHDNPA L+A E +T +YPVF+LDP F     IG+ R+RF+LQ++ NLD NL+ +  RLFVVKG+P   + RL +EW + +LTFE DTEPYA  RD+ V E+     V V    SHTL+D    V +  G   P  YQ F  + + +GP AP         L                        G +     T   D+ VP LS +   ETD  P LYPGGET AL RM+ H+  + +I TFEKP TSPN++ PSTTVLSPYLK G LS+RLFYH L  + +  K  H+QPPVSL GQ+LWREFFY  G  T NFD+M GN +C+QIPWG N E L AW  A+TGYPFIDA MTQLR EGWIHHLARHA+ACFLTRGDLW SWEEG +VFE+ LLDADWS+N GNW+WLSAS+FF+QYFRVYSP+AFG KTD  G+YI+KYLPVL+K P KYIYEPWKAP  +Q+TAGCV+G+DYP P+VDH TV K+ + KM  AY  +K+   K G KS  KKRP+    K     KK+A
Sbjct:    7 IHWFRKGLRLHDNPAFLKAIEESTEIYPVFVLDPWFVTSSAIGINRWRFLLQSLVNLDSNLKMLNLRLFVVKGKPEIEIKRLCQEWKINRLTFEVDTEPYAVQRDKIVEEIVQAMGVEVIKCVSHTLYDVHRTV-QTNGGKAPISYQGFQAVLSKLGPPAPALPAPTVADL-----------------------SGCKTPISPTHEKDYGVPTLSDLKKSETDCGPLLYPGGETEALDRMERHIKKINWICTFEKPNTSPNSIIPSTTVLSPYLKFGCLSARLFYHKLADVYSGKK--HSQPPVSLHGQMLWREFFYTVGAVTKNFDRMQGNSVCKQIPWGSNKEHLLAWTHAKTGYPFIDAIMTQLRLEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWMWLSASSFFYQYFRVYSPIAFGKKTDPNGDYIKKYLPVLKKYPAKYIYEPWKAPLSMQQTAGCVIGKDYPKPIVDHDTVRKENIKKMTEAYALDKQ--TKEGTKSPSKKRPSDSRPKSSSPVKKKA 521          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|597761587|ref|XP_007244778.1| (PREDICTED: cryptochrome-1-like [Astyanax mexicanus] >gi|597761589|ref|XP_007244779.1| PREDICTED: cryptochrome-1-like [Astyanax mexicanus])

HSP 1 Score: 590.882 bits (1522), Expect = 0.000e+0
Identity = 285/531 (53.67%), Postives = 362/531 (68.17%), Query Frame = 0
Query:   51 LHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETD-APTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKG-GEKSGEKKRPAG 579
            +HWFRKGLRLHDNPAL  A     H+YPVFILDP F K   +G+ R+RF+++ +K+LD +LR++ SRLFV++G P E  PRLF EW VT+LTFE D+EPY++ RD+ V +LA +H V + T  SHTL++ E  +    GK  P  Y  F  +   +GP          + +P P  E + G     +                T  +++ VP L  +G   T   P LYPGGE  AL R+ E++    ++ +FEKP+TSPNAL+PSTTVLSPY+K G LS+R F+  L  +   H   H+ PPVSL GQLLWREFFY   +  PNF+KM GN IC Q+ W  N E L AW EARTG+PFIDA MTQLR+EGWIHHLARHA+ACFLTRGDLW SWEEG +VFE+ LLDADW++N GNW WLSASAFFHQYFRVYSP+AFG KTDK G+YI+KYLP+L+K P +YIYEPWKAPK +QE AGC+VG+DYP P+VDH T+SK+ + +MKAAY         G  E+ G+K++ A 
Sbjct:    6 IHWFRKGLRLHDNPALKYALHDCKHMYPVFILDPWFPKNAQVGINRWRFLIEALKDLDSSLRKLNSRLFVIRGVPREVFPRLFEEWKVTRLTFEVDSEPYSQKRDKEVMDLAKQHGVEIITKISHTLYNLERVIEENNGK-APLTYVRFQTVLNKIGP--------PKRPVPAPTREDMKGVSTPSS---------------ETDKENYGVPTLDELGQDSTTLGPVLYPGGEQEALRRLDEYMQRTNWVCSFEKPQTSPNALKPSTTVLSPYVKFGCLSARTFWWRLAEVY--HGKKHSAPPVSLHGQLLWREFFYTAAYGIPNFNKMEGNTICVQVDWDSNPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWALNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDKNGDYIKKYLPILKKFPAQYIYEPWKAPKSIQEQAGCIVGKDYPRPIVDHDTISKKNIQRMKAAYAKRSPDSSDGSAERKGQKRKSAS 510          
BLAST of EWM23893.1 vs. NCBI_GenBank
Match: gi|926629004|ref|XP_013780130.1| (PREDICTED: cryptochrome-2-like [Limulus polyphemus])

HSP 1 Score: 588.571 bits (1516), Expect = 0.000e+0
Identity = 289/536 (53.92%), Postives = 361/536 (67.35%), Query Frame = 0
Query:   47 RTVSLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDVIGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTVYQSFVKLFASMGPV-APVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDA-PTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKEGGGKGGEKSGEKKRPAGE 580
            +  S+HWFRKGLRLHDNPAL++  E   +  P+FILDP F K   +G  R+RF+LQ++K+LD++L ++ SRLFV++G+P E  P++F++W V  LT+E DTEPYA  RD  V +LA    V V+   SHTL+D E  V +  G   P  YQ+ + +   +GP   PVAS    K    P                        +EE+    + ++VP L  +G  E+D  P LY GGET AL  M E L+N  ++  FEKPKT PN+L PSTTVLSPYLK G LS R FY+ L  +  ++ G  T+PPVSL GQLLWREFFY  G+ATPNFD+M GNP+C+QIPW  N E L AW +A+TG+PFIDA MTQLR+EGWIHHLARHA+ACFLTRGDLW SWE G +VFE++LLDADWS+N GNW+WLSASAFFHQYFRVYSPVAFG   DK G+YIRKYLPVL+KMP +YIYEPWKAP  VQ+  GCV+G+DYP P+VDH    K  + KM  AY  NK       E+    KR + E
Sbjct:    2 KETSVHWFRKGLRLHDNPALMKTLEKCGNFRPIFILDPWFVKNMHVGPNRWRFLLQSLKDLDNSLNKLHSRLFVIRGKPLEVFPKIFQQWNVKTLTYEVDTEPYAIERDEKVDQLAKRMGVTVKKEVSHTLYDIERLVMKNNG-SAPHTYQAMLTMLKKIGPPPKPVASLDSLKGCSTP------------------------VEENH--DEKYNVPDLKELGIHESDCGPNLYSGGETEALRIMNEKLSNKSWVCKFEKPKTQPNSLEPSTTVLSPYLKFGCLSVRTFYYRLLDVYNKYTGNCTKPPVSLEGQLLWREFFYTVGYATPNFDQMKGNPLCKQIPWSNNPEFLEAWTKAQTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWEHGMKVFEEFLLDADWSLNAGNWMWLSASAFFHQYFRVYSPVAFGKSMDKNGDYIRKYLPVLKKMPSEYIYEPWKAPLKVQQQIGCVIGKDYPKPIVDHDEARKSNLEKMNKAYKENK----TSNEQKTTNKRSSEE 506          
The following BLAST results are available for this feature:
BLAST of EWM23893.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105174|gb|EWM23893.1|0.000e+0100.006-4 photolyase [Nannochloropsis gaditana][more]
gi|553179018|ref|XP_005852637.1|0.000e+099.11cryptochrome [Nannochloropsis gaditana CCMP526] >g... [more]
gi|919094575|ref|XP_013384158.1|0.000e+056.07PREDICTED: cryptochrome-1-like isoform X1 [Lingula... [more]
gi|919078125|ref|XP_013420209.1|0.000e+055.89PREDICTED: cryptochrome-1-like isoform X1 [Lingula... [more]
gi|919094577|ref|XP_013384159.1|0.000e+056.07PREDICTED: cryptochrome-1-like isoform X2 [Lingula... [more]
gi|919078127|ref|XP_013420210.1|0.000e+055.89PREDICTED: cryptochrome-1-like isoform X2 [Lingula... [more]
gi|514694862|ref|XP_004995002.1|0.000e+055.35DNA photolyase [Salpingoeca rosetta] >gi|326437928... [more]
gi|908409475|ref|XP_013065766.1|0.000e+055.43PREDICTED: cryptochrome-1-like isoform X1 [Biompha... [more]
gi|597761587|ref|XP_007244778.1|0.000e+053.67PREDICTED: cryptochrome-1-like [Astyanax mexicanus... [more]
gi|926629004|ref|XP_013780130.1|0.000e+053.92PREDICTED: cryptochrome-2-like [Limulus polyphemus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6805rna6805Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications