EWM23892.1, cds6787 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|585105173|gb|EWM23892.1| (phytoene desaturase [Nannochloropsis gaditana]) HSP 1 Score: 1214.13 bits (3140), Expect = 0.000e+0 Identity = 590/590 (100.00%), Postives = 590/590 (100.00%), Query Frame = 0 Query: 1 MAKLGVAVASISALLGCFSVQAFIPQTPLSELARHGRSRQSSTSRLVPSANFLVDYPPPGERRDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPTVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWSYFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQDEQEWDGRSQAMDLIAEEEKRAGRAAEAAIKV 590 MAKLGVAVASISALLGCFSVQAFIPQTPLSELARHGRSRQSSTSRLVPSANFLVDYPPPGERRDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPTVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWSYFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQDEQEWDGRSQAMDLIAEEEKRAGRAAEAAIKV Sbjct: 1 MAKLGVAVASISALLGCFSVQAFIPQTPLSELARHGRSRQSSTSRLVPSANFLVDYPPPGERRDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPTVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWSYFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQDEQEWDGRSQAMDLIAEEEKRAGRAAEAAIKV 590
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|299472937|emb|CBN77338.1| (Phytoene desaturase, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 726.472 bits (1874), Expect = 0.000e+0 Identity = 358/540 (66.30%), Postives = 426/540 (78.89%), Query Frame = 0 Query: 19 SVQAFI--PQTPLSELARHGRSRQSSTSRLVPSANFLVDYPPPGERRDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPTVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWS---YFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCA 553 ++ AF+ P T + + G +RQS+ R S+ + D+P PGER+DYPRP LEETS + + + S+ PRP+ VI GAGLAGLS AKYL DAG KP+VLEARDVLGGKV+AWQDKDGDW+ETGLHIFFGAYPN+ ++F EL I +RLQWKSHSMIFAMPG+Q A+G QRFSRF+FP+ LPAP NG++AILLN+EMLT+PEKI+FGIGLLPAI+ GQ YVE+ DSL+V QWMK+QGVPDRVNDEVFIAMAKAL FIDP+ LSMT+VLTALNRFLQE GSKMAFLDGPPPTRLC+PM +++ GGE+ + + E++L+ + V G ++ +G+ V D YVS MPVD++K +P E W YF++L+ L GVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMS TCKGY+DD+KSMLELVFAPAKDWIGKSDEDI+ ATM ELYRLFP ELS DGS AKL+KSAVVKTP SVY G+E +RP Q TPV NF+LAG +TKQ YL SMEGAT SGKL A Sbjct: 18 TISAFVLPPATSFTGVGLSGSARQSAIRRNGVSS-MIFDFPAPGERKDYPRPPLEETSENQRESAAFSQAFLDMPRPERPLKVAVI-GAGLAGLSCAKYLSDAGHKPVVLEARDVLGGKVAAWQDKDGDWVETGLHIFFGAYPNVNQMFTELGIRDRLQWKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISEILLN---DDKTVKGLKMQDGSTVVADAYVSTMPVDILKLALP----EAWRPMPYFEKLNGLNGVPVINIHMWFDRKLTTVDHLLFSRSPLLSVYADMSLTCKGYRDDDKSMLELVFAPAKDWIGKSDEDIIEATMGELYRLFPNELSKDGSGAKLLKSAVVKTPLSVYEATAGRELYRPVQTTPVSNFFLAGCFTKQKYLASMEGATFSGKLAA 548
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|159465297|ref|XP_001690859.1| (phytoene desaturase [Chlamydomonas reinhardtii] >gi|47779187|gb|AAT38476.1| chloroplast phytoene desaturase precursor [Chlamydomonas reinhardtii] >gi|158279545|gb|EDP05305.1| phytoene desaturase [Chlamydomonas reinhardtii]) HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0 Identity = 350/498 (70.28%), Postives = 404/498 (81.12%), Query Frame = 0 Query: 63 RDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKP-TVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWSYFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQD 559 RDYPRP E T+ +F+ A+ LS ++K PRP KP VVIAGAGLAGLS AKYL DAG PIVLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPNMM +FKEL IEERLQWK HSMIFAMP D+ G FSRFDFP +PAPFNG+ AIL N++MLTWPEKI+F IGLLPAII GQ YVE+QD LSV QWM+QQGVPDRVN+EVFIAMAKALAFIDPD+LSMT+VLTALNRFLQE+ GSKMAFLDG PP RLC+PMV++ GGE+ +NA V++++L+ + V ++L G +V+GDLY+SAMPVD++K ++P + K YF QL ELEGVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMSTTCK Y D EKSMLELVFAPAKDWIG+SDEDI+AATM EL RLFPTE+ AD S AK+ K V+KTP SVY G+EAFRP QRTP+ NF+LAGD+TKQ YL SMEGA SGKL A +I D Sbjct: 41 RDYPRPAFE-TAETFQEAKALSSKLKDAPRP--AKPLKVVIAGAGLAGLSAAKYLSDAGHHPIVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNMMNVFKELNIEERLQWKEHSMIFAMP---DSPGE--FSRFDFPD-IPAPFNGVFAILRNNQMLTWPEKIQFAIGLLPAIIFGQKYVEEQDHLSVTQWMRQQGVPDRVNEEVFIAMAKALAFIDPDRLSMTVVLTALNRFLQERHGSKMAFLDGAPPERLCQPMVDHFTARGGELKMNARVKDIVLNDD---GSVKHYKLTTGEVVEGDLYMSAMPVDILKLLVPDQWKPN-PYFSQLKELEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYYDTEKSMLELVFAPAKDWIGRSDEDIIAATMTELERLFPTEIKADQSLAKIRKYKVIKTPLSVYESRAGREAFRPSQRTPIKNFFLAGDFTKQKYLASMEGAIFSGKLAAEQIVND 525
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|302833183|ref|XP_002948155.1| (hypothetical protein VOLCADRAFT_88495 [Volvox carteri f. nagariensis] >gi|300266375|gb|EFJ50562.1| hypothetical protein VOLCADRAFT_88495 [Volvox carteri f. nagariensis]) HSP 1 Score: 692.575 bits (1786), Expect = 0.000e+0 Identity = 346/501 (69.06%), Postives = 404/501 (80.64%), Query Frame = 0 Query: 63 RDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKP-TVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWS---YFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQD 559 RDYP+P E T+ +F+ A+ LS ++K PRP KP VVIAGAGLAGLS AKYL DAG +PIVLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPNMM +FKEL IE+RLQWK HSMIFAMP FSRFDFP +PAP+NGI+AIL N++MLTWPEKI+F +GLLPAII GQ YVE+QD L+V +WM++Q VPDRVNDEVFIAMAKALAFI PD+LSMT+VLTALNRFLQE+ GSKMAFLDG PP RLC+PMV+Y GGE+ +NA +R++ L+ + V FRL NG +V+GDLY+SA+PVD++K V+P E+W YF QL ELEGVPVINIH+WFDRKL TVDHLLFSRSPLLSVYADMSTTCK Y D++KSMLELVFAPAK+WIG+SDEDI+AATM+EL RLFPTE+ AD S AK+ K VVKTP SVY G+EAFRP QRTP+ NFYLAGD+TKQ YL SMEGA SGKL A KI +D Sbjct: 41 RDYPKPAFE-TAETFQEAQALSAKLKNAPRPV--KPLKVVIAGAGLAGLSAAKYLADAGHQPIVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNMMNIFKELNIEDRLQWKEHSMIFAMPNLPG-----EFSRFDFPD-IPAPWNGIIAILRNNQMLTWPEKIQFALGLLPAIIFGQKYVEEQDHLTVTEWMRKQNVPDRVNDEVFIAMAKALAFIGPDRLSMTVVLTALNRFLQERHGSKMAFLDGAPPERLCQPMVDYFTARGGEIKMNARLRDIELNDD---GSVKQFRLTNGEVVEGDLYMSAVPVDILKLVVP----EQWQPMPYFAQLKELEGVPVINIHIWFDRKLITVDHLLFSRSPLLSVYADMSTTCKEYADNDKSMLELVFAPAKEWIGRSDEDIIAATMKELERLFPTEIKADQSLAKIRKYKVVKTPLSVYESRSGREAFRPSQRTPISNFYLAGDFTKQKYLASMEGAIFSGKLAAEKIVED 525
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|1004147993|gb|KXZ55966.1| (hypothetical protein GPECTOR_2g1518 [Gonium pectorale]) HSP 1 Score: 686.411 bits (1770), Expect = 0.000e+0 Identity = 347/511 (67.91%), Postives = 402/511 (78.67%), Query Frame = 0 Query: 59 PGER------RDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKP-TVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWS---YFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQD 559 PG R RDYPRP E T+ +F+ A+ LS +++ PRP KP VVIAGAGLAGLS AKYL DAG PIVLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPNMM +FKEL IEERLQWK HSMIFAMP FSRFDFP +PAP+NGI+AIL N++MLTWPEKI+F +GLLPAII GQ YVE+QDSL+V +WM++Q VPDRVNDEVFIAMAKALAFI PD+LSMT+VLTALNRFLQE+ GSKMAFLDG PP RLC+PMV++ + GGE+ +NA ++ + L+ + V F+L NG IVQGDLY+SAMPVD++K ++P E W YF QL ELEGVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMSTTCK Y D EKSMLELVFAPAK+WIG+SD+DI+ ATM EL RLFPTE+ AD S AK+ K V+KTP SVY G+EAFRP QR+P+ NFYLAGD+TKQ YL SMEGA SGKL A I D Sbjct: 31 PGRRQLEVVARDYPRPAFE-TAETFQEAQALSAKLRNAPRP--AKPLKVVIAGAGLAGLSAAKYLSDAGHHPIVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNMMNIFKELNIEERLQWKEHSMIFAMPNLPG-----EFSRFDFPD-IPAPWNGIIAILRNNQMLTWPEKIQFALGLLPAIIFGQKYVEEQDSLTVTEWMRKQNVPDRVNDEVFIAMAKALAFIGPDRLSMTVVLTALNRFLQERHGSKMAFLDGAPPERLCQPMVDHFQARGGELKMNARLQRIELNED---GSVKHFQLTNGEIVQGDLYMSAMPVDILKLLVP----EPWRPMPYFSQLKELEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYYDTEKSMLELVFAPAKEWIGRSDQDIIDATMTELERLFPTEIRADQSLAKIRKYKVIKTPLSVYESRAGREAFRPSQRSPISNFYLAGDFTKQKYLASMEGAIFSGKLAAEAIVDD 525
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|558761522|gb|AHA90853.1| (phytoene desaturase [Ulva pertusa]) HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0 Identity = 333/497 (67.00%), Postives = 392/497 (78.87%), Query Frame = 0 Query: 63 RDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPTVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWS---YFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKI 556 RDYP+PN E +F+ A+QLS+ IK PRP+ K VI GAGLAGLS AKYL DAG P+VLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAY NMM +F EL IE+RLQWK HSMIFAMP D G FSRFDFP LPAP NG+ AIL NDEMLTWPEKI+F +GLLPAII GQ YVE QD L+V +WM++Q VPDRVNDEVFIAMAKAL FIDPD LSMT+VLTALNRFLQE+ GSKMAFLDG PP RLC+PMV+Y++ +GG+V +N V+E++L+ + S V ++ +G+IV+ DLYVS+ PVD++K ++P + WS +F Q+D LEGVPVINIH+WFD KLTTVDHLLFSRSPLLSVYADMSTTC+ Y+D KSMLELVFAPAKDWIGKSDE I+AATM EL RLFPTE+ AD S AK++K V+KT RSVY G+E +RP Q+TP+ NFYL G YTKQ YL SMEGA SGKL A +I Sbjct: 32 RDYPKPNFE-VGGTFQEAKQLSDYIKNAPRPQSPKKVAVI-GAGLAGLSAAKYLTDAGHTPVVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYANMMNIFSELNIEDRLQWKEHSMIFAMP---DEPGE--FSRFDFPD-LPAPINGVTAILRNDEMLTWPEKIQFALGLLPAIIFGQKYVEDQDKLTVTEWMRKQNVPDRVNDEVFIAMAKALNFIDPDSLSMTVVLTALNRFLQERHGSKMAFLDGAPPERLCQPMVDYVKDHGGDVQVNQRVKEIVLNTD---STVKHLQMTDGSIVEADLYVSSAPVDIMKLLLP----DAWSKMAFFKQMDGLEGVPVINIHIWFDTKLTTVDHLLFSRSPLLSVYADMSTTCREYEDANKSMLELVFAPAKDWIGKSDEQIIAATMLELERLFPTEVKADESLAKILKYKVIKTARSVYEATAGREDYRPTQKTPIDNFYLCGCYTKQKYLASMEGAIFSGKLAAREI 513
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|54654427|gb|AAV37090.1| (phytoene desaturase [Haematococcus lacustris]) HSP 1 Score: 665.996 bits (1717), Expect = 0.000e+0 Identity = 333/508 (65.55%), Postives = 400/508 (78.74%), Query Frame = 0 Query: 63 RDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPT-VVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWS---YFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQDEQEWDGR 566 +DYP P+ + +S +++ A LS +++ PRP KP VVIAGAGLAGLS AKYL DAG P+VLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPN+ LFKEL I++RLQWK HSMIFAMP DA G FSRFDFP LPAP+NGI+AIL N++ML+WPEKI+F IGLLPAII GQ Y E+QD L+V +WM++QGVPDRVN+EVFIAMAKAL FI+PD LSMT+VLTALNRFLQE+ GSKMAFLDG PP RLC+PMV+Y + GG++ N+ V++++L+ + V L NG V+GDLY+SAMPVD++K ++P + W+ YF QL+ LEGVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMSTTCK Y D++KSMLELVFAPAK+WIG+ DE+I+AATM EL RLFPTE+ AD S AK++K VVKTP SVY G+E FRP QR+P+ NFYLAGDYTKQ YL SMEGA SGKL I +D W R Sbjct: 40 KDYPTPDFQ-SSDTYQEALSLSTKLRNAPRP--AKPLRVVIAGAGLAGLSAAKYLADAGHHPVVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFKELGIQDRLQWKEHSMIFAMP---DAPGE--FSRFDFPE-LPAPWNGIIAILRNNQMLSWPEKIRFAIGLLPAIIFGQRYCEEQDELTVTEWMRKQGVPDRVNEEVFIAMAKALNFINPDDLSMTVVLTALNRFLQEQHGSKMAFLDGAPPERLCQPMVDYFKARGGDLMFNSRVKQIVLNDD---KSVKHLALTNGQTVEGDLYISAMPVDIMKILMP----DPWASMPYFKQLNGLEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYADEKKSMLELVFAPAKEWIGRPDEEIIAATMTELERLFPTEVRADQSMAKILKYKVVKTPLSVYKSTAGREKFRPTQRSPISNFYLAGDYTKQKYLASMEGAVFSGKLVTEAIVED---WSAR 528
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|860211653|gb|AKO71907.1| (norflurazon resistant phytoene desaturase [Cloning vector pBPL] >gi|860211656|gb|AKO71909.1| norflurazon resistant phytoene desaturase [Cloning vector pBPS]) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 333/508 (65.55%), Postives = 399/508 (78.54%), Query Frame = 0 Query: 63 RDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPT-VVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWS---YFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQDEQEWDGR 566 +DYP P+ + +S +++ A LS +++ PRP KP VVIAGAGLAGLS AKYL DAG P+VLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPN+ LFKEL I++RLQWK HSMIFAMP DA G FSRFDFP LPAP+NGI+AIL N++ML+WPEKI+F IGLLPAII GQ Y E+QD L+V +WM++QGVPDRVN+EVFIAMAKAL FI+PD LSMT+VLTALNRFLQE+ GSKMAFLDG PP RLC+PMV+Y + GG++ N+ V++++L+ + V L NG V+GDLY+SAMPVD++K ++P + W+ YF QL+ LEGVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMSTTCK Y DD+KSMLELVFAPAK+WIG+ DE+I+AATM EL RLFPTE+ AD S AK++K VVKTP SVY G+E FRP QR+P+ NFYLAGDYTKQ Y SMEGA SGKL I +D W R Sbjct: 40 KDYPTPDFQ-SSDTYQEALSLSTKLRNAPRP--AKPLRVVIAGAGLAGLSAAKYLADAGHHPVVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFKELGIQDRLQWKEHSMIFAMP---DAPGE--FSRFDFPE-LPAPWNGIIAILRNNQMLSWPEKIRFAIGLLPAIIFGQRYCEEQDELTVTEWMRKQGVPDRVNEEVFIAMAKALNFINPDDLSMTVVLTALNRFLQEQHGSKMAFLDGAPPERLCQPMVDYFKARGGDLMFNSRVKQIVLNDD---KSVKHLALTNGQTVEGDLYISAMPVDIMKILMP----DPWASMPYFKQLNGLEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYADDKKSMLELVFAPAKEWIGRPDEEIIAATMTELERLFPTEVRADQSMAKILKYKVVKTPLSVYKSTAGREKFRPTQRSPISNFYLAGDYTKQKYRASMEGAVFSGKLVTEAIVED---WSAR 528
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|860206513|gb|AKO71906.1| (phytoene desaturase [Haematococcus lacustris]) HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0 Identity = 333/508 (65.55%), Postives = 399/508 (78.54%), Query Frame = 0 Query: 63 RDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKPT-VVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWS---YFDQLDELEGVPVINIHLWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQDEQEWDGR 566 +DYP P+ + +S +++ A LS +++ PRP KP VVIAGAGLAGLS AKYL DAG P+VLE RDVLGGKV+AW+D+DGDW ETGLHIFFGAYPN+ LFKEL I++RLQWK HSMIFAMP DA G FSRFDFP LPAP+NGI+AIL N++ML+WPEKI+F IGLLPAII GQ Y E+QD L+V +WM++QGVPDRVN+EVFIAMAKAL FI+PD LSMT+VLTALNRFLQE+ GSKMAFLDG PP RLC+PMV+Y + GG++ N+ V++++L+ + V L NG V+GDLY+SAMPVD++K ++P + W+ YF QL+ LEGVPVINIH+WFDRKLTTVDHLLFSRSPLLSVYADMSTTCK Y DD+KSMLELVFAPAK+WIG+ DE+I+AATM EL RLFPTE+ AD S AK++K VVKTP SVY G+E FRP QR+ + NFYLAGDYTKQ YL SMEGA SGKL I +D W R Sbjct: 40 KDYPTPDFQ-SSDTYQEALSLSTKLRNAPRP--AKPLRVVIAGAGLAGLSAAKYLADAGHHPVVLEGRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFKELGIQDRLQWKEHSMIFAMP---DAPGE--FSRFDFPE-LPAPWNGIIAILRNNQMLSWPEKIRFAIGLLPAIIFGQRYCEEQDELTVTEWMRKQGVPDRVNEEVFIAMAKALNFINPDDLSMTVVLTALNRFLQEQHGSKMAFLDGAPPERLCQPMVDYFKARGGDLMFNSRVKQIVLNDD---KSVKHLALTNGQTVEGDLYISAMPVDIMKILMP----DPWASMPYFKQLNGLEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYADDKKSMLELVFAPAKEWIGRPDEEIIAATMTELERLFPTEVRADQSMAKILKYKVVKTPLSVYKSTAGREKFRPTQRSSISNFYLAGDYTKQKYLASMEGAVFSGKLVTEAIVED---WSAR 528
BLAST of EWM23892.1 vs. NCBI_GenBank
Match: gi|1012104788|ref|XP_015958360.1| (phytoene dehydrogenase, chloroplastic/chromoplastic [Arachis duranensis]) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 340/541 (62.85%), Postives = 402/541 (74.31%), Query Frame = 0 Query: 37 RSRQSSTSRLV-------PSANFLVDYPPPGERRDYPRPNLEETSSSFKIAEQLSEEIKKFPRPKEGKP-TVVIAGAGLAGLSTAKYLCDAGFKPIVLEARDVLGGKVSAWQDKDGDWIETGLHIFFGAYPNMMRLFKELKIEERLQWKSHSMIFAMPGKQDAEGRQRFSRFDFPSFLPAPFNGILAILLNDEMLTWPEKIKFGIGLLPAIIQGQDYVEKQDSLSVKQWMKQQGVPDRVNDEVFIAMAKALAFIDPDQLSMTIVLTALNRFLQEKDGSKMAFLDGPPPTRLCEPMVEYIRQNGGEVHLNAPVREMMLHREFRESVVDGFRLPNGTIVQGDLYVSAMPVDLVKKVIPKRMKERWSYFDQLDELEGVPVINIHLWFDRKL-TTVDHLLFSRSPLLSVYADMSTTCKGYQDDEKSMLELVFAPAKDWIGKSDEDIVAATMEELYRLFPTELSADGSKAKLVKSAVVKTPRSVYTPLPGKEAFRPDQRTPVGNFYLAGDYTKQIYLGSMEGATLSGKLCALKIAQDEQEWDGRSQ 568 R+ +S+T+RL+ P F VDYP RP LE T + F A LS + PRP KP VV+AGAGLAGLSTAKYL DAG KP++LEARDVLGGKV+AWQD+DGDW ETGLHIFFGAYPN+ LF EL I +RLQWK HSMIFAMP K FSRFDFP LPAP NGILAIL N+EMLTWPEK+KF IGLLPA++ GQ YVE QD LSVK WM++QGVPDRV DEVFIAM+KAL FI+PD+LSM +L ALNRFLQEK GSKMAFLDG PP RLC P+V++I+ GGEVHLN+ ++++ L+ + V F L NG +++GD YV A PVD++K ++P KE YF +L++L GVPVIN+H+WFDRKL T DHLLFSRSPLLSVYADMS TCK Y + +SMLELVFAPA++W+ +SDEDI+AATM EL +LFP E+ AD +KAK+VK VVKTPRSVY +P E RP QR+P+ FYLAGDYTKQ YL SMEGA LSGKLCA I QD + RSQ Sbjct: 52 RAAKSTTTRLLRKKHGSLPLRVFCVDYP---------RPELENTVN-FLEAAFLSSTFRDSPRP--AKPLKVVVAGAGLAGLSTAKYLADAGHKPVLLEARDVLGGKVAAWQDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPG-----EFSRFDFPEALPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAMLGGQSYVEAQDGLSVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLNSRIQKIDLN---DDGTVKSFLLNNGKVIEGDAYVFATPVDILKLLVPNNWKE-IPYFQRLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWVSRSDEDIIAATMSELAKLFPDEICADQTKAKIVKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLAARSQ 571 The following BLAST results are available for this feature:
BLAST of EWM23892.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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