EWM23899.1, cds6779 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|585105181|gb|EWM23899.1| (tigr00730 family protein [Nannochloropsis gaditana]) HSP 1 Score: 506.908 bits (1304), Expect = 0.000e+0 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVLGFAGAILTVGEAALLNRFWRKRQAGRHF 247
MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVLGFAGAILTVGEAALLNRFWRKRQAGRHF
Sbjct: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVLGFAGAILTVGEAALLNRFWRKRQAGRHF 247
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|553181206|ref|XP_005853528.1| (lysine decarboxylase-like protein [Nannochloropsis gaditana CCMP526] >gi|422295534|gb|EKU22833.1| lysine decarboxylase-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 504.212 bits (1297), Expect = 1.591e-180 Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0
Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVLGFAGAILTVGEAALLNRFWRKRQAGRHF 247
MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVLGFAGAILTVGEAALLNRFWRKRQAGR F
Sbjct: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVLGFAGAILTVGEAALLNRFWRKRQAGRRF 247
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|299115374|emb|CBN74203.1| (putative decarboxylase family protein, lysine decarboxylase? [Ectocarpus siliculosus]) HSP 1 Score: 177.948 bits (450), Expect = 7.016e-52 Identity = 81/180 (45.00%), Postives = 113/180 (62.78%), Query Frame = 0
Query: 4 CVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQA 183
CV+ SSS TP+PYL VAR+LG +A + C+NG G+ GCMGALN+G G+++ VIH W++D E V +L + G LQERKR+L E DC++ LPGG GTWDEL E+ C +G +PI +++V+ FY G Q RA D++LYA D +H E+ A+ WC ++ A
Sbjct: 12 CVYGSSSVNTPQPYLDVARKLGNLLADGGHTCVNGAGRAGCMGALNDGVTERCGRVRGVIHEMWIVDASEHPQVKDLRVVGGQGLQERKRMLMEGADCIVALPGGLGTWDELWEMVCLKGIGLCDVPICVLDVEDFYAGFKVQTKRAQADRLLYADMDKLLHFESDPAKAIEWCVSQLGA 191
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|224003807|ref|XP_002291575.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973351|gb|EED91682.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 176.022 bits (445), Expect = 1.518e-50 Identity = 95/245 (38.78%), Postives = 137/245 (55.92%), Query Frame = 0
Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFED-----------VDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVL-GFAGAILTVGEAAL 233
+R+C + SSSS TPE Y A ELG +A+ + C+NG G GCM A+N+GA G G+I VIH +++D ++ + EL++A+G++LQERKRLL + D ++VLPGG GTWDEL E+AC VGF +PI VNVDG+YD + + RA D++LY P D +H E T + A+ W + R + +TRT + +R S + G GF + G+ L
Sbjct: 8 LRICCYGSSSSKTPEKYTNAAYELGIILARRGHTCVNGAGSAGCMAAMNQGASDGNGRIVGVIHEMFIVDGSDWLEGSQHTFANNGGKHELLVAKGDDLQERKRLLVKGADGLVVLPGGPGTWDELWEMACARHVGFHNMPIVCVNVDGYYDTFMSILQRAHSDELLYKEPQDIVHFEETPEAAVKWIEDYLADPRNK------EKQQKTIKTRTSVLKRLQSNVSGSAFAGFQRMVSFFGDEGL 246
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|551678990|ref|XP_005842247.1| (hypothetical protein GUITHDRAFT_159078 [Guillardia theta CCMP2712] >gi|428186417|gb|EKX55267.1| hypothetical protein GUITHDRAFT_159078 [Guillardia theta CCMP2712]) HSP 1 Score: 169.859 bits (429), Expect = 1.881e-49 Identity = 87/187 (46.52%), Postives = 124/187 (66.31%), Query Frame = 0
Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREA 187
MRVCV SSSS TP+ YL ++ELG +A+ ++C+NGGGK GCMGALN+G GG VIH +V+D E + ++++A+G+ L ERK+LL E DCVI LPGG GTWDEL EV S+GF IPI ++N +GFYD +A+A DK++Y P+ + E++ AL++ A+R+ ++ A
Sbjct: 1 MRVCVCGSSSSSTPKAYLDASKELGRLLAERGHICVNGGGKTGCMGALNDGCIHAGGTTIGVIHEMFVVDGEEHTGLTQMIVARGDCLAERKKLLVEGADCVIALPGGVGTWDELWEVVAEVSLGFKNIPIVVINTNGFYDSFKAMLAKAMEDKLIYKGPETLVRFESSVVAALNF-AERMHWKKGA 186
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|397633270|gb|EJK70908.1| (hypothetical protein THAOC_07697, partial [Thalassiosira oceanica]) HSP 1 Score: 171.014 bits (432), Expect = 4.710e-48 Identity = 86/197 (43.65%), Postives = 120/197 (60.91%), Query Frame = 0
Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVD---------ELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAG 188
+RVC + SSSS TP Y A +LG +A+ + C+NG G +GCM A+N GA GG+I VIH K+V+D ++ + EL++A GN+LQERKRLL D ++VLPGG GTWDEL E+AC +GF +PI VNVDG+YD + +A++D +LY+ P +H E T + A+ W +V R G
Sbjct: 28 LRVCCYGSSSSRTPARYTDAAYDLGSILARRGHTCVNGAGSSGCMAAMNSGASDSGGRIVGVIHEKFVVDGSDWLEGAHSVFGRGGAELLLATGNDLQERKRLLVRDADALVVLPGGPGTWDELWEMACAGHLGFHSMPIVCVNVDGYYDDFRNMLDKASKDGLLYSEPGAIVHFEDTPEEAVGWVEAQVGDGRITG 224
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|219112085|ref|XP_002177794.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410679|gb|EEC50608.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 158.688 bits (400), Expect = 3.578e-45 Identity = 80/180 (44.44%), Postives = 112/180 (62.22%), Query Frame = 0
Query: 2 RVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIH---GKWVIDKMEFED--VDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSW 176
RVC + SSSSLTPE Y AR LG +A+ + C+NG G GCM A+NEGA G G I VIH V ++ + D E+++A G++LQERK+LL + D ++VLPGG GTWDEL E+AC ++G +PI VNVDG+Y+ + RA D++ P + +H E +A+ A+ W
Sbjct: 1 RVCCYGSSSSLTPERYRTEARSLGYILARRGHTCVNGAGSFGCMAAMNEGAAIGNGHIVGVIHEMVAHPVFERSDHRDGPTREMLVAGGDDLQERKKLLVQGADALVVLPGGPGTWDELWEMACGRNIGLHALPIVCVNVDGYYEPFQAMLQRAYDDQLTKLPPHEIVHFEDSAEAAVRW 180
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|1210526060|dbj|GAX14978.1| (uncharacterized protein FisN_12Lh326 [Fistulifera solaris]) HSP 1 Score: 162.54 bits (410), Expect = 4.553e-45 Identity = 94/240 (39.17%), Postives = 128/240 (53.33%), Query Frame = 0
Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFED-------------------------VDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGF-GKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFL 214
+RV + SSSS TPE YLK AR LG +AK + C+NG G GCM A+N+GA G G I VIH W++D+ ++ + E++IA G +LQERKRLL E ++VLPGG GTWDEL E+AC +G +PI VNVD FY ++ + RA D++L TPD+ +H TA+ A+ W + + A A VL+ R T R+ SF
Sbjct: 24 LRVTCYGSSSSKTPEKYLKEARNLGYILAKRGHTCVNGAGSFGCMAAMNDGAVEGNGHIVGVIHKMWLVDQGDWASTPTGKTLRDGGAHSVFDKASNKEGPIREMLIADGPDLQERKRLLVEGAHALVVLPGGPGTWDELWEMACARKLGLHNSLPIVCVNVDHFYQPFVEMMQRAYEDRLLEQTPDEVIHFVETAEEAVRWLEEIQDSDDFASKA------VLKKRPSTL---RKSSFF 254
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|1210517491|dbj|GAX23748.1| (uncharacterized protein FisN_12Hh326 [Fistulifera solaris]) HSP 1 Score: 160.229 bits (404), Expect = 3.924e-44 Identity = 95/241 (39.42%), Postives = 128/241 (53.11%), Query Frame = 0
Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKME------------------FE--------DVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGF-GKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFL 214
+RV + SSSS TPE YLK AR LG +AK + C+NG G GCM A+N+GA G G I VIH W++D+ + FE + E++IA G +LQERKRLL E ++VLPGG GTWDEL E+AC +G +PI VNVD FY ++ + RA D++L PD+ +H TA+ A+ W + + A A VL+ R T R+ SF
Sbjct: 24 LRVTCYGSSSSKTPEKYLKEARNLGYILAKRGHTCVNGAGSFGCMAAMNDGAVEGNGHIVGVIHKMWLVDQGDWASTPTGKTLRDGGAHSVFEKSNNPSEGPIREMLIADGPDLQERKRLLVEGAHALVVLPGGPGTWDELWEMACARKLGLHNSLPIVCVNVDHFYQPFLEMMQRAYEDRLLEQKPDEVIHFVETAEEAVRWLEEIQNSDDFASKA------VLKKRPSTL---RKSSFF 255
BLAST of EWM23899.1 vs. NCBI_GenBank
Match: gi|676398995|ref|XP_009042775.1| (hypothetical protein AURANDRAFT_35169 [Aureococcus anophagefferens] >gi|323446322|gb|EGB02527.1| hypothetical protein AURANDRAFT_35169 [Aureococcus anophagefferens]) HSP 1 Score: 137.887 bits (346), Expect = 1.470e-36 Identity = 85/194 (43.81%), Postives = 121/194 (62.37%), Query Frame = 0
Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKI-PITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGG 193
MR+CV+ASSS+ T + ++ R LG IA ++ +NGGG+ G MGALNEG RA GG+I VIH ++V+D EF +++V+A G++L ERKRLL E CD +IV+PGG GT DEL + A +GF P+ LVN+DG+YD + Q+ RA + + P + +H AL+WC +AQ+ A G
Sbjct: 1 MRICVYASSSTRTSDRFMAAGRALGAAIAAGGHVLVNGGGRAGGMGALNEGCRAAGGRIVCVIHERFVVDGEEFAGAEKMVVAGGDDLGERKRLLVEHCDALIVMPGGVGTLDELWDAASLQQLGFKTSRPVVLVNLDGYYDATLAQLRRAHDEGLTSKPPAEILHAVPDVGAALAWC----EAQQTADAYTAG 190 The following BLAST results are available for this feature:
BLAST of EWM23899.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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