EWM23914.1, cds6774 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM23914.1
Unique Name	cds6774
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002469.1:506905..507180 +
Alignment location	CM002469.1:507522..508952 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM23914.1
Product	vacuolar h atpase b subunit
Orig transcript id	gnl\|cribi\|Naga_100113g20.9980.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002469.1	supercontig	CM002469.1:506905..507180 +
CM002469.1	supercontig	CM002469.1:507522..508952 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity
GO:0005215	transporter activity
GO:0000166	nucleotide binding
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009987	cellular process
GO:0006810	transport
GO:0008152	metabolic process
GO:0046034	ATP metabolic process
GO:0015991	ATP hydrolysis coupled proton transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0033180	proton-transporting V-type ATPase, V1 domain
GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain

Vocabulary: **INTERPRO**
Term	Definition
IPR020003	ATPase_a/bsu_AS
IPR027417	P-loop_NTPase
IPR022879	V-ATPase_su_B/beta
IPR004100	ATPase_F1_a/bsu_N
IPR005723	ATPase_V1-cplx_bsu
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR000793	ATPase_F1/V1/A1-cplx_a/bsu_C

Homology

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|585105196|gb|EWM23914.1| (vacuolar h+ atpase b subunit [Nannochloropsis gaditana])

HSP 1 Score: 1172.53 bits (3032), Expect = 0.000e+0
Identity = 568/568 (100.00%), Postives = 568/568 (100.00%), Query Frame = 0

Query:    1 MLGTLVRSAPSLGGWDPMHDKSGWPFVSTRGLVHRIPWLRMRGPLFLTPPDNSHAFIHTSAWTSGNYKESSTMAPLSTGDVVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAAGAGVGGEESKAAK 568
            MLGTLVRSAPSLGGWDPMHDKSGWPFVSTRGLVHRIPWLRMRGPLFLTPPDNSHAFIHTSAWTSGNYKESSTMAPLSTGDVVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAAGAGVGGEESKAAK
Sbjct:    1 MLGTLVRSAPSLGGWDPMHDKSGWPFVSTRGLVHRIPWLRMRGPLFLTPPDNSHAFIHTSAWTSGNYKESSTMAPLSTGDVVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAAGAGVGGEESKAAK 568

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|397614739|gb|EJK62984.1| (hypothetical protein THAOC_16387 [Thalassiosira oceanica])

HSP 1 Score: 839.336 bits (2167), Expect = 0.000e+0
Identity = 399/475 (84.00%), Postives = 438/475 (92.21%), Query Frame = 0

Query:   81 VVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAA 555
            VVK YS+ PR++Y TI GVNGPLV+LDNVKLPK+AEIVNLTLG+G +R GQVLEVAG +AVVQVFEGTS IDNR T  EFTGDVL+  VSEE+LGRSFNGSGKVID +P VLPE YLDINGQPINPS RDYP+AMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKD+ D+H+DNF +VFGAMGVNMETARFFR+ FEESGAMQR+ LFLNLANDPTIERIITPRLALTTAEYLAYER++HVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGR+VG+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDR LH + IFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYA+YA+GKDV AMKAVVGEEALS+EDHLYL F+++FE K+++QG    RT+FESLDLAWS+LR FP++LLKKI K  L+ YYARR+AA
Sbjct:   20 VVKDYSVIPRLEYRTIAGVNGPLVLLDNVKLPKYAEIVNLTLGDGTQRSGQVLEVAGSRAVVQVFEGTSDIDNRKTRCEFTGDVLKMGVSEEMLGRSFNGSGKVIDSSPDVLPEAYLDINGQPINPSSRDYPKAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDTTDAHEDNFAIVFGAMGVNMETARFFRSDFEESGAMQRTALFLNLANDPTIERIITPRLALTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVVGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKGIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYASYAMGKDVLAMKAVVGEEALSMEDHLYLSFLERFESKFVSQGPYQARTIFESLDLAWSILRAFPKELLKKIPKKTLDQYYARRSAA 494

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|224000653|ref|XP_002289999.1| (vacuolar ATPase [Thalassiosira pseudonana CCMP1335] >gi|220975207|gb|EED93536.1| vacuolar ATPase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0
Identity = 398/475 (83.79%), Postives = 435/475 (91.58%), Query Frame = 0

Query:   81 VVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAA 555
            VVK YS+ PR++Y TI GVNGPLVILDNVKLPK+AEIVNLTLG+G  R GQVLEV+G +AVVQVFEGTS IDNR T  EFTGDVL+  VSEE+LGRSFNGSGKVID AP VLPE YLDINGQPINPS RDYP+AMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKD+ DSH++NF +VFGAMGVNMETARFFR+ FEESGAMQR+ LFLNLANDPTIERIITPRLALTTAEYLAYER++HVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGR+VG+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDR LH + IFPPINVLPSLSRLMKSAIGEGMTR+DHGSVSNQLYA+YA+GKDV AMKAVVGEEALS+EDHLYL F+++FE K+++QG    RT+FESLDLAWS+LR FP++LLKKI K  L+ YYARR  A
Sbjct:   21 VVKDYSVVPRLEYRTIAGVNGPLVILDNVKLPKYAEIVNLTLGDGTTRSGQVLEVSGSRAVVQVFEGTSDIDNRKTRCEFTGDVLKMGVSEEMLGRSFNGSGKVIDNAPKVLPEAYLDINGQPINPSARDYPKAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDTTDSHEENFAIVFGAMGVNMETARFFRSDFEESGAMQRTALFLNLANDPTIERIITPRLALTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVVGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKGIFPPINVLPSLSRLMKSAIGEGMTRDDHGSVSNQLYASYAMGKDVLAMKAVVGEEALSMEDHLYLSFLERFESKFVSQGPYQARTIFESLDLAWSILRAFPKELLKKIPKKTLDQYYARRATA 495

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|567989002|gb|ETL39272.1| (V-type proton ATPase subunit B, isoform [Phytophthora parasitica])

HSP 1 Score: 835.484 bits (2157), Expect = 0.000e+0
Identity = 391/475 (82.32%), Postives = 431/475 (90.74%), Query Frame = 0

Query:   81 VVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAA 555
            VV+ Y + PRI Y TI GVNGPLVIL+NVKLPKFAEIVNLTL +GEKRQG+VLEV G KAVVQVFEGT GIDNRHT  EFTGDVL+ A+SEE+LGR+FNGSGK IDGAP V+ E+YLDI GQPINPSCRDYP+ MIQTGISAIDVMNS+ARGQKIP+FSAAGLPHNE+AAQI RQA LV+ KD +DSHDDNF +VFGAMGVNMETARFFR  FEESG+MQ++ LF+NLANDPTIERI+TPRLALTTAEYLAYER+MHVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLST+YERAGR+ G+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIY+DR LHNR+IFPPINVLPSLSRLMKSAIGEGMTR+DH +VSNQLYA+YA GKDV AMKAVVGEEALSLEDHLYL+F DKFEGK+I QG   +R +FESLDLAWSL R FP++LLKKI K  L+TYYARRT A
Sbjct:   15 VVRDYYVEPRIDYRTISGVNGPLVILENVKLPKFAEIVNLTLASGEKRQGKVLEVQGSKAVVQVFEGTDGIDNRHTHCEFTGDVLKMAISEEMLGRAFNGSGKAIDGAPAVVAEEYLDIEGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQIVRQAGLVQRKDVVDSHDDNFAIVFGAMGVNMETARFFRNDFEESGSMQKTALFMNLANDPTIERIVTPRLALTTAEYLAYERDMHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTLYERAGRVTGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIFPPINVLPSLSRLMKSAIGEGMTRDDHSTVSNQLYASYATGKDVQAMKAVVGEEALSLEDHLYLKFTDKFEGKFIAQGPYQSRDIFESLDLAWSLFRAFPKELLKKIPKKHLDTYYARRTQA 489

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|675195457|ref|XP_008906613.1| (V-type proton ATPase subunit B, isoform [Phytophthora parasitica INRA-310] >gi|566022977|gb|ETI45888.1| V-type proton ATPase subunit B, isoform [Phytophthora parasitica P1569] >gi|567960281|gb|ETK85843.1| V-type proton ATPase subunit B, isoform [Phytophthora parasitica] >gi|568018194|gb|ETL92371.1| V-type proton ATPase subunit B, isoform [Phytophthora parasitica] >gi|568048650|gb|ETM45689.1| V-type proton ATPase subunit B, isoform [Phytophthora parasitica] >gi|568093529|gb|ETN08325.1| V-type proton ATPase subunit B, isoform [Phytophthora parasitica INRA-310] >gi|570326611|gb|ETO74559.1| V-type proton ATPase subunit B, isoform [Phytophthora parasitica P1976] >gi|570950462|gb|ETP15719.1| V-type proton ATPase subunit B, isoform [Phytophthora parasitica CJ01A1] >gi|570984053|gb|ETP43753.1| V-type proton ATPase subunit B, isoform [Phytophthora parasitica P10297])

HSP 1 Score: 835.099 bits (2156), Expect = 0.000e+0
Identity = 391/475 (82.32%), Postives = 431/475 (90.74%), Query Frame = 0

Query:   81 VVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAA 555
            VV+ Y + PRI Y TI GVNGPLVIL+NVKLPKFAEIVNLTL +GEKRQG+VLEV G KAVVQVFEGT GIDNRHT  EFTGDVL+ A+SEE+LGR+FNGSGK IDGAP V+ E+YLDI GQPINPSCRDYP+ MIQTGISAIDVMNS+ARGQKIP+FSAAGLPHNE+AAQI RQA LV+ KD +DSHDDNF +VFGAMGVNMETARFFR  FEESG+MQ++ LF+NLANDPTIERI+TPRLALTTAEYLAYER+MHVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLST+YERAGR+ G+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIY+DR LHNR+IFPPINVLPSLSRLMKSAIGEGMTR+DH +VSNQLYA+YA GKDV AMKAVVGEEALSLEDHLYL+F DKFEGK+I QG   +R +FESLDLAWSL R FP++LLKKI K  L+TYYARRT A
Sbjct:   15 VVRDYYVEPRIDYRTISGVNGPLVILENVKLPKFAEIVNLTLASGEKRQGKVLEVQGSKAVVQVFEGTDGIDNRHTHCEFTGDVLKMAISEEMLGRAFNGSGKAIDGAPAVVAEEYLDIEGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQIVRQAGLVQRKDVVDSHDDNFAIVFGAMGVNMETARFFRNDFEESGSMQKTALFMNLANDPTIERIVTPRLALTTAEYLAYERDMHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTLYERAGRVTGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIFPPINVLPSLSRLMKSAIGEGMTRDDHSAVSNQLYASYATGKDVQAMKAVVGEEALSLEDHLYLKFTDKFEGKFIAQGPYQSRDIFESLDLAWSLFRAFPKELLKKIPKKHLDTYYARRTQA 489

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|301113059|ref|XP_002998300.1| (V-type proton ATPase subunit B, putative [Phytophthora infestans T30-4] >gi|262112594|gb|EEY70646.1| V-type proton ATPase subunit B, putative [Phytophthora infestans T30-4])

HSP 1 Score: 833.943 bits (2153), Expect = 0.000e+0
Identity = 391/475 (82.32%), Postives = 431/475 (90.74%), Query Frame = 0

Query:   81 VVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAA 555
            VV+ Y + PRI Y TI GVNGPLVIL+NVKLPKFAEIVNLTL +GEKRQG+VLEV G KAVVQVFEGT GIDNRHT  EFTGDVL+ A+SEE+LGR+FNGSGK IDGAP V+ E+YLDI GQPINPSCRDYP+ MIQTGISAIDVMNS+ARGQKIP+FSAAGLPHNE+AAQI RQA LV+ KD +DSHDDNF +VFGAMGVNMETARFFR  FEESG+MQ++ LF+NLANDPTIERI+TPRLALTTAEYLAYER+MHVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLST+YERAGR+ G+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIY+DR LHNR+IFPPINVLPSLSRLMKSAIGEGMTR+DH +VSNQLYA+YA GKDV AMKAVVGEEALSLEDHLYL+F DKFEGK+I QG   +R +FESLDLAWSL R FP++LLKKI K  L+TYYARRT A
Sbjct:   15 VVRDYYVEPRIDYRTISGVNGPLVILENVKLPKFAEIVNLTLASGEKRQGKVLEVQGSKAVVQVFEGTDGIDNRHTHCEFTGDVLKMAISEEMLGRAFNGSGKAIDGAPAVVAEEYLDIEGQPINPSCRDYPKEMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQIVRQAGLVQRKDVVDSHDDNFAIVFGAMGVNMETARFFRNDFEESGSMQKTALFMNLANDPTIERIVTPRLALTTAEYLAYERDMHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTLYERAGRVTGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIFPPINVLPSLSRLMKSAIGEGMTRDDHSAVSNQLYASYATGKDVQAMKAVVGEEALSLEDHLYLKFTDKFEGKFIAQGPYQSRDIFESLDLAWSLFRAFPKELLKKIPKKHLDTYYARRTQA 489

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|676384497|ref|XP_009035527.1| (hypothetical protein AURANDRAFT_63073 [Aureococcus anophagefferens] >gi|323453590|gb|EGB09461.1| hypothetical protein AURANDRAFT_63073 [Aureococcus anophagefferens])

HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0
Identity = 394/484 (81.40%), Postives = 439/484 (90.70%), Query Frame = 0

Query:   82 VKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAAGAGVGGEESK 565
            + SYS+ PR+ Y TI+GVNGPLVIL+NVK+PKFAEIV+LTLG+GEKR GQVLEV+G +AVVQVFEGTS IDNRHT  EFTGDVL+  +SEE+LGRSFNGSGKVID AP VL E YLDING PINPSCRDYP+AMIQTGISAIDVMNS+ARGQKIP+FSAAGLPHNEVAAQIARQASLV+LKD++D H++NF + FGAMGVNMETARFFR  FEESGAMQR+VLFLNLANDPTIERIITPRLALTTAEYLAYE+++HVL ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGR+ G+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDR +HN+EIFPPINVLPSLSRLMKSAIGEGMTR+DHG+VSNQLYA+YA+G+DV AMKAVVGEEALSL+DHLYL F+D+FEGK++ QG   NRT+FESLDLAWSLLR FP++LLKKI K  L  +YAR+ A     G EE K
Sbjct:    1 MASYSVQPRLDYRTIEGVNGPLVILENVKMPKFAEIVHLTLGSGEKRSGQVLEVSGSRAVVQVFEGTSDIDNRHTHCEFTGDVLKMPISEEMLGRSFNGSGKVIDNAPAVLAEDYLDINGTPINPSCRDYPKAMIQTGISAIDVMNSIARGQKIPLFSAAGLPHNEVAAQIARQASLVQLKDTMDGHEENFALCFGAMGVNMETARFFRNDFEESGAMQRTVLFLNLANDPTIERIITPRLALTTAEYLAYEKDLHVLTILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVDGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQMHNKEIFPPINVLPSLSRLMKSAIGEGMTRDDHGAVSNQLYASYAMGRDVLAMKAVVGEEALSLDDHLYLAFLDRFEGKFVAQGPYQNRTIFESLDLAWSLLRAFPKELLKKIPKKTLAEHYARKAATQPPKGAEEKK 484

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|953503038|emb|CEG35806.1| (v-type proton atpase subunit isoform [Plasmopara halstedii])

HSP 1 Score: 832.402 bits (2149), Expect = 0.000e+0
Identity = 389/473 (82.24%), Postives = 430/473 (90.91%), Query Frame = 0

Query:   81 VVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRT 553
            VV+ Y + PRI Y TI GVNGPLVIL+NVKLPKFAEIVNLTL +GEKRQG+VLEV G KAVVQVFEGT GIDNRHT  EFTGDVL+ A+SEE+LGR+FNGSGK IDGAP V+ E+YLDI GQPINPSCRDYP+ M+QTGISAIDVMNS+ARGQKIP+FSAAGLPHNE+AAQI RQA LV+ KD +DSHDDNF +VFGAMGVNMETARFFR  FEESG+MQ++ LF+NLANDPTIERI+TPRLALTTAEYLAYER+MHVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLST+YERAGR+ G+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIY+DR LHNR+IFPPINVLPSLSRLMKSAIGEGMTR+DH +VSNQLYA+YA GKDV AMKAVVGEEALSLEDHLYL+F DKFEGK+I QG   +R +FESLDLAWSL R FP++LLKKI K  L+TYYARRT
Sbjct:   15 VVRDYFVEPRIDYRTISGVNGPLVILENVKLPKFAEIVNLTLASGEKRQGKVLEVQGSKAVVQVFEGTDGIDNRHTHCEFTGDVLKMAISEEMLGRAFNGSGKAIDGAPAVVAEEYLDIEGQPINPSCRDYPKEMMQTGISAIDVMNSIARGQKIPLFSAAGLPHNEIAAQIVRQAGLVQRKDVVDSHDDNFAIVFGAMGVNMETARFFRNDFEESGSMQKTALFMNLANDPTIERIVTPRLALTTAEYLAYERDMHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTLYERAGRVTGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIFPPINVLPSLSRLMKSAIGEGMTRDDHSAVSNQLYASYATGKDVQAMKAVVGEEALSLEDHLYLKFTDKFEGKFIAQGPYQSRDIFESLDLAWSLFRAFPKELLKKIPKKHLDTYYARRT 487

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|1210527463|dbj|GAX13748.1| (V-type H+-transporting ATPase subunit B [Fistulifera solaris])

HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0
Identity = 396/476 (83.19%), Postives = 433/476 (90.97%), Query Frame = 0

Query:   81 VVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAAG 556
            +VK Y+  PR++Y TI GVNGPLVILDNVKLPK+AEIVNL L +G  R GQVLEVAG +AVVQVFEGT+GIDNR TT EFTGDVL+  VSEE+LGRSFNGSGKVID AP VL E YLDINGQPINPS RDYP+AMIQTGISAIDVMNS+ARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKD+ D H+DNF +VFGAMGVNMETARFFR+ FEESGAMQR+ LFLNLANDPTIERIITPRLALTTAEYLAYER++HVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGR+VG+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDR LH + IFPPINVLPSLSRLMKSAIGEGMTR+DHGSVSNQLYA+YA+GKDV AMKAVVGEEALS+EDHLYL F+++FEGK+I+QG    RT+FESLDLAWS+LR FP++LLKKI K  L+ YYARR  A 
Sbjct:   19 IVKDYAAVPRLEYRTIAGVNGPLVILDNVKLPKYAEIVNLQLRDGTTRSGQVLEVAGSRAVVQVFEGTAGIDNRKTTCEFTGDVLKMGVSEEMLGRSFNGSGKVIDQAPKVLAEAYLDINGQPINPSSRDYPKAMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDTQDGHEDNFAIVFGAMGVNMETARFFRSDFEESGAMQRTALFLNLANDPTIERIITPRLALTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVVGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKGIFPPINVLPSLSRLMKSAIGEGMTRDDHGSVSNQLYASYAMGKDVMAMKAVVGEEALSMEDHLYLSFLERFEGKFISQGPYQARTIFESLDLAWSILRAFPKELLKKIPKKTLDQYYARRREAA 494

[Close]

BLAST of EWM23914.1 vs. NCBI_GenBank
Match: gi|1210519250|dbj|GAX21834.1| (V-type H+-transporting ATPase subunit B [Fistulifera solaris])

HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0
Identity = 395/476 (82.98%), Postives = 433/476 (90.97%), Query Frame = 0

Query:   81 VVKSYSLNPRIQYSTIQGVNGPLVILDNVKLPKFAEIVNLTLGNGEKRQGQVLEVAGKKAVVQVFEGTSGIDNRHTTAEFTGDVLRTAVSEEVLGRSFNGSGKVIDGAPPVLPEQYLDINGQPINPSCRDYPRAMIQTGISAIDVMNSVARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDSLDSHDDNFTVVFGAMGVNMETARFFRTSFEESGAMQRSVLFLNLANDPTIERIITPRLALTTAEYLAYEREMHVLIILTDMSSYCDALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIVGKNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRALHNREIFPPINVLPSLSRLMKSAIGEGMTRNDHGSVSNQLYANYALGKDVAAMKAVVGEEALSLEDHLYLQFVDKFEGKYINQGSTANRTVFESLDLAWSLLRIFPRDLLKKITKNELNTYYARRTAAG 556
            +VK Y+  PR++Y TI GVNGPLVILDNVKLPK+AEIVNL L +G  R GQVLEVAG +AVVQVFEGT+GIDNR TT EFTGDVL+  VSEE+LGRSFNGSGKVID AP VL E YLDINGQPINPS RDYP+AMIQTGISAIDVMNS+ARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKD+ D H+DNF +VFGAMGVNMETARFFR+ FEESGAMQR+ LFLNLANDPTIERIITPRLALTTAEYLAYER++HVL+ILTDMSSY DALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGR+VG+NGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDR LH + IFPPINVLPSLSRLMKSAIGEGMTR+DHGSVSNQLYA+YA+GKDV AMKAVVGEEALS+EDHLYL F+++FEGK+++QG    RT+FESLDLAWS+LR FP++LLKKI K  L+ YYARR  A 
Sbjct:   19 IVKDYAAVPRLEYRTIAGVNGPLVILDNVKLPKYAEIVNLQLRDGTTRSGQVLEVAGSRAVVQVFEGTAGIDNRKTTCEFTGDVLKMGVSEEMLGRSFNGSGKVIDQAPKVLAEAYLDINGQPINPSSRDYPKAMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEVAAQIARQASLVKLKDTQDGHEDNFAIVFGAMGVNMETARFFRSDFEESGAMQRTALFLNLANDPTIERIITPRLALTTAEYLAYERDLHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVVGRNGSITQLPILTMPNDDITHPIPDLTGYITEGQIYLDRQLHTKGIFPPINVLPSLSRLMKSAIGEGMTRDDHGSVSNQLYASYAMGKDVMAMKAVVGEEALSMEDHLYLSFLERFEGKFVSQGPYQARTIFESLDLAWSILRAFPKELLKKIPKKTLDQYYARRREAA 494

The following BLAST results are available for this feature:

BLAST of EWM23914.1 vs. NCBI_GenBank

BLAST of EWM23914.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585105196\|gb\|EWM23914.1\|	0.000e+0	100.00	vacuolar h+ atpase b subunit [Nannochloropsis gadi...	[more]
gi\|397614739\|gb\|EJK62984.1\|	0.000e+0	84.00	hypothetical protein THAOC_16387 [Thalassiosira oc...	[more]
gi\|224000653\|ref\|XP_002289999.1\|	0.000e+0	83.79	vacuolar ATPase [Thalassiosira pseudonana CCMP1335...	[more]
gi\|567989002\|gb\|ETL39272.1\|	0.000e+0	82.32	V-type proton ATPase subunit B, isoform [Phytophth...	[more]
gi\|675195457\|ref\|XP_008906613.1\|	0.000e+0	82.32	V-type proton ATPase subunit B, isoform [Phytophth...	[more]
gi\|301113059\|ref\|XP_002998300.1\|	0.000e+0	82.32	V-type proton ATPase subunit B, putative [Phytopht...	[more]
gi\|676384497\|ref\|XP_009035527.1\|	0.000e+0	81.40	hypothetical protein AURANDRAFT_63073 [Aureococcus...	[more]
gi\|953503038\|emb\|CEG35806.1\|	0.000e+0	82.24	v-type proton atpase subunit isoform [Plasmopara h...	[more]
gi\|1210527463\|dbj\|GAX13748.1\|	0.000e+0	83.19	V-type H+-transporting ATPase subunit B [Fistulife...	[more]
gi\|1210519250\|dbj\|GAX21834.1\|	0.000e+0	82.98	V-type H+-transporting ATPase subunit B [Fistulife...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna6790	rna6790	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications