EWM23912.1, cds6771 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|585105194|gb|EWM23912.1| (ferredoxin-dependent bilin reductase [Nannochloropsis gaditana]) HSP 1 Score: 788.104 bits (2034), Expect = 0.000e+0 Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0 Query: 1 MGWSKPSQASGGLFRRHRCPVLAILLCIYAIVVESFLIPTSSRATAVLRKRTGAALNSQLVRKSTVQPREPLTTSGGSSPPATADPPHPPVVAHAVAAETLLPPSYFQSLPWTRSITGDGPETLLYMPFLEAQMRHLEAQRGFVRQLPVPENVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDMLTFQFDMADPALLLQKKKPQQPSHQQSGQ 379 MGWSKPSQASGGLFRRHRCPVLAILLCIYAIVVESFLIPTSSRATAVLRKRTGAALNSQLVRKSTVQPREPLTTSGGSSPPATADPPHPPVVAHAVAAETLLPPSYFQSLPWTRSITGDGPETLLYMPFLEAQMRHLEAQRGFVRQLPVPENVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDMLTFQFDMADPALLLQKKKPQQPSHQQSGQ Sbjct: 1 MGWSKPSQASGGLFRRHRCPVLAILLCIYAIVVESFLIPTSSRATAVLRKRTGAALNSQLVRKSTVQPREPLTTSGGSSPPATADPPHPPVVAHAVAAETLLPPSYFQSLPWTRSITGDGPETLLYMPFLEAQMRHLEAQRGFVRQLPVPENVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDMLTFQFDMADPALLLQKKKPQQPSHQQSGQ 379
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|546302508|ref|XP_005711717.1| (unnamed protein product [Chondrus crispus] >gi|507108047|emb|CDF41423.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 197.978 bits (502), Expect = 7.236e-57 Identity = 103/271 (38.01%), Postives = 163/271 (60.15%), Query Frame = 0 Query: 109 SLPWTRSITGDGPETLLYMPFLEAQMRHLEAQRGFVRQLPVPENVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEE--RVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDMLTFQFDMADPALLLQKKKPQQPSHQQS 377 +LPWT SI D + LL+MPF+ Q+ + ++ V LP E+++Y ++ K+ +++ S+ +T++FRKIR TY+D G QVFNSVWYP + + P+LGID L F K+L V+DFQPLSQ+ Y +++ + PIK KY L +MS R+Y++ ++FS+ ++F + + V + LFPAF EYLT Y + + PD E RV + YD+Y DPA GLF+ Y+G ++A + T +F +D + +++K + S Sbjct: 59 ALPWTESIAKDDFK-LLFMPFVMHQLGEMRSKLEGVEDLPFEESLSYQQSEKRPARIESWQWKTKEFRKIRATYIDAGVNAQVFNSVWYPNTEYEHPLLGIDFLSFGKKKVLCVLDFQPLSQDEHYLKKYCEPVAPIKLKYEGLAGSMSARFYDEAQFFSKQLVFAKFDNAEPVMTQLFPAFQEYLTAY---ITMMKNATPDTSPESMARVAQLQKDYDQYSAERDPAVGLFSTYWGKEWA-EKFTHEFLFSDAVPVAKEEKEDKKQSNSS 324
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|1210522273|dbj|GAX19035.1| (hypothetical protein FisN_8Hh258 [Fistulifera solaris]) HSP 1 Score: 189.889 bits (481), Expect = 2.664e-53 Identity = 109/293 (37.20%), Postives = 164/293 (55.97%), Query Frame = 0 Query: 88 HPPVVA--HAVAAETLLPPSYFQSLPWTRSITGDGPE--TLLYMPFLEAQMRHLEAQRGFVRQLPVPE---NVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQ-EAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDML-TFQFDMADPALLLQKKKPQQ 371 +PP ++ HA AA Q +PW SI PE LLYMPF E M ++ +R +P + +Y +K +++ S C + ++RKIR TY D G+ QV+N+V+YP + P+LGIDLL F K LA+VDFQPL + E + F ++L PIK +Y L MS+++Y++T++FS+ MLF R ++ S + + LFPAF Y+ + D +R D ++ V+ R +AYD Y DPA GLFT FGA++A D + F F M++ + PQ+ Sbjct: 71 YPPSISISHAEAA---------QGMPWKSSIDPKYPEEEDLLYMPFWEWHMSFMKENLTNLRVMPCTNGKTDFSYNENIQKKARIVSLCASSSEYRKIRMTYYDAGENTQVYNAVFYPDPKYNLPVLGIDLLAFNRKKYLAIVDFQPLHENEEDHATTFEHRLQPIKEQYENLKGRMSSKFYDETQFFSQQMLFSRFEDESIISNELFPAFQSYVQTHLDLIREVDPVEADLDM---VLKRQKAYDTYSAERDPATGLFTAMFGAEWAMDFVHDFLFSMSERPTTTRSSLPQR 351
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|641739670|gb|AIA66935.1| (putative 15,16-DHBV:ferredoxin-dependent bilin reductase, partial [synthetic construct]) HSP 1 Score: 179.489 bits (454), Expect = 1.268e-50 Identity = 94/209 (44.98%), Postives = 129/209 (61.72%), Query Frame = 0 Query: 167 SFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPD--AEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDM-LTFQFDMADPALLLQKKKPQQP 372 S+ ET++FRKIR TY+D G+ QVFNSVWYPR DAP+ GID L F K+LA++D QPL+Q+ AY + +I+ L P++ KY L MS+++Y++TR+FS+ +LFGR V S+LFPAF EY+ Y V+ RG PD + V R YD+Y DPA GLF+ Y+G ++A D F F A P + KP +P Sbjct: 57 SWQYETKEFRKIRLTYIDAGQNAQVFNSVWYPRHSYDAPVFGIDFLAFGKKKVLAILDLQPLTQDPAYLENYIDPLIPLRNKYEDLCGRMSSKFYDETRFFSKQLLFGRFDNDEPVMSSLFPAFQEYMEYY---VKMIRGLTPDDSKDFTSHVAELQRQYDQYSAEKDPAVGLFSTYWGEEWAEDFTYNFLFSEAVP-----QPKPAEP 257
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|551645021|ref|XP_005825300.1| (ferredoxin blin reductase plastid precursor [Guillardia theta CCMP2712] >gi|428169386|gb|EKX38320.1| ferredoxin blin reductase plastid precursor [Guillardia theta CCMP2712] >gi|641739672|gb|AIA66936.1| 15,16-DHBV:ferredoxin dependent bilin reductase [synthetic construct]) HSP 1 Score: 180.259 bits (456), Expect = 1.296e-50 Identity = 94/209 (44.98%), Postives = 129/209 (61.72%), Query Frame = 0 Query: 167 SFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPD--AEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDM-LTFQFDMADPALLLQKKKPQQP 372 S+ ET++FRKIR TY+D G+ QVFNSVWYPR DAP+ GID L F K+LA++D QPL+Q+ AY + +I+ L P++ KY L MS+++Y++TR+FS+ +LFGR V S+LFPAF EY+ Y V+ RG PD + V R YD+Y DPA GLF+ Y+G ++A D F F A P + KP +P Sbjct: 79 SWQYETKEFRKIRLTYIDAGQNAQVFNSVWYPRHSYDAPVFGIDFLAFGKKKVLAILDLQPLTQDPAYLENYIDPLIPLRNKYEDLCGRMSSKFYDETRFFSKQLLFGRFDNDEPVMSSLFPAFQEYMEYY---VKMIRGLTPDDSKDFTSHVAELQRQYDQYSAEKDPAVGLFSTYWGEEWAEDFTYNFLFSEAVP-----QPKPAEP 279
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|545701971|ref|XP_005703317.1| (15,16-dihydrobiliverdin:ferredoxin oxidoreductase [Galdieria sulphuraria] >gi|452819744|gb|EME26797.1| 15,16-dihydrobiliverdin:ferredoxin oxidoreductase [Galdieria sulphuraria]) HSP 1 Score: 179.489 bits (454), Expect = 5.398e-50 Identity = 94/238 (39.50%), Postives = 135/238 (56.72%), Query Frame = 0 Query: 112 WTRSITG-DGPETLLYMPFLEAQMRHLEAQRGFVRQLPVPENVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAH 348 W S+ G D P ++Y PFLE L A V P+ E +A +++KK +++ S+C + FRKIR TY+D G QVFN+VWYP + PILG+D L F G +L V+DFQPL + Y ++I L PI+ +Y L MS+R+Y++ R+FS+ +LFGR + + LFPAF EYL +Y + ++ V D + + YD Y DPA LF YFG+ +AH Sbjct: 59 WKTSVAGSDIP--MIYSPFLEDMQNTLFASFETVEDYPLSEFLASAQSSKKPARIESWCYQCPKFRKIRLTYLDAGVAAQVFNAVWYPISSLELPILGVDFLSFGGKNVLCVMDFQPLMNDQYYLDKYIQPLHPIRERYADLAGRMSSRFYDENRFFSKELLFGRFDSTKPIYERLFPAFREYLDLY---ITLAKQTVEDDKSRSIIWQLQCEYDRYSAEKDPAMSLFRSYFGSTWAH 291
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|1189386308|gb|OSX73424.1| (hypothetical protein BU14_0348s0001 [Porphyra umbilicalis]) HSP 1 Score: 178.333 bits (451), Expect = 6.055e-50 Identity = 94/235 (40.00%), Postives = 141/235 (60.00%), Query Frame = 0 Query: 127 MPFLEAQMRHLEAQRGFVRQLPVPENVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEERVVSR--HRAYDEYQLVHDPAHGLFTGYFGAQFAHDMLTFQFDMAD 359 M F+ M + ++ V LP E+++ K+ +++ S+ + + FRKIR TY+D G QVFNSVWYP D P+LGID L F ++L ++DFQPLSQE AY +++I L PIKAKYP L MS+R+Y++ R+FS+ + FG+ ++ V + L+PAF+EYL Y VR + P+ + + +R YD+Y DPA GLF+ YFG +A + T +F +D Sbjct: 1 MDFIVHMMGVMRSELTGVADLPFEESLSLQTGKKRPARIESWNYQADGFRKIRSTYIDAGLPAQVFNSVWYPDPAYDLPLLGIDFLSFGKKRVLCILDFQPLSQEPAYLEKYIAPLAPIKAKYPGLAGKMSSRFYDENRFFSQELAFGKFDDAGPVATELYPAFVEYLAEY---VRAFKAATPETDPAKIAATRAAQAEYDQYSAERDPAVGLFSTYFGPDWA-EAFTHEFLFSD 231
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|1210525836|dbj|GAX15442.1| (hypothetical protein FisN_8Lh258 [Fistulifera solaris]) HSP 1 Score: 179.489 bits (454), Expect = 2.328e-49 Identity = 100/270 (37.04%), Postives = 153/270 (56.67%), Query Frame = 0 Query: 108 QSLPWTRSITGDGPE-TLLYMPFLEAQMRHLEAQRGFVRQLPVPE---NVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQ-EAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDML-TFQFDMADPALLLQKKKPQQ 371 Q +PW SI PE LLYMPF E M ++ +R +P + +Y +K +++ S + ++RKIR TY D G+ QV+N+V+YP + P+LGIDLL F K LA+VDFQPL + E + + ++L PIK Y L MS+++Y++T++FS+ MLF R ++ + + + LFPAF Y+ + D +R D ++ V+ R +AYD Y DPA GLFT FG ++A D + F F M++ + +PQQ Sbjct: 83 QGMPWKSSIDPKYPEEDLLYMPFWEWHMSFMKENLTNLRVMPCTNGKTDFSYNENTQKKARIVSLSASSSEYRKIRMTYYDAGENTQVYNAVFYPDPKYNLPVLGIDLLAFNRKKYLAIVDFQPLHENEEDHATTYEHRLQPIKELYENLKGRMSSKFYDETQFFSQQMLFSRFEDETIISNELFPAFQSYVQTHLDLIREVDPVEADIDM---VLKRQKAYDTYSAERDPATGLFTAMFGEEWAMDFVHDFLFSMSERP--TTRSRPQQ 347
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|299115646|emb|CBN75847.1| (conserved unknown protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 174.096 bits (440), Expect = 2.137e-48 Identity = 89/185 (48.11%), Postives = 120/185 (64.86%), Query Frame = 0 Query: 176 RKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQEAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVY-SDTVRRS-RGCVPDAEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHD-MLTFQFDM 357 RK+R TY D G +QV N+V YP D P+LGIDL+ F G K LA +DFQPL + + + R+ ++L PIKAKYP + MS R+Y+ R+FSE MLFGR ++ + V LFPAF EYL++Y SD ++ + G P E RV+ RHRAYD+Y DPAHGLF YFG ++ + M F F++ Sbjct: 51 RKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGG-KHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFEEYLSLYISDLLKAAEEGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSENFMDNFLFEL 234
BLAST of EWM23912.1 vs. NCBI_GenBank
Match: gi|397620701|gb|EJK65856.1| (hypothetical protein THAOC_13245, partial [Thalassiosira oceanica]) HSP 1 Score: 179.874 bits (455), Expect = 2.161e-47 Identity = 98/257 (38.13%), Postives = 148/257 (57.59%), Query Frame = 0 Query: 110 LPWTRSIT-GDGPETLLYMPFLEAQMRHLEAQRGFVRQLPVPE----NVAYTRAAKKASQMGSFCVETEDFRKIRFTYMDGGKGLQVFNSVWYPRFDTDAPILGIDLLLFAGHKMLAVVDFQPLSQ-EAAYKQRFINQLGPIKAKYPALNEAMSNRYYEDTRWFSEHMLFGRLKESSQVQSTLFPAFMEYLTVYSDTVRRSRGCVPDAEVEERVVSRHRAYDEYQLVHDPAHGLFTGYFGAQFAHDML-TFQFDMAD 359 +PW +I D + LLYMPF E Q+ +E+ + + +V+ +K +++ + C ++++RKIR TY D G +QVFNSVWYP + P+LGIDLL F K LA+VDFQPL + E + + + L P+K +Y L MS+++Y++T++FS+ MLF R ++ + V LFPAF +Y+ ++D VRR+ EVE R RAYD Y DPA GLF FG +A D + F F +++ Sbjct: 300 MPWRDTIGRTDEADPLLYMPFWEWQLDFMESSLTNLHPISCDTETGVDVSLNVNPEKRARIVNNCYASDEYRKIRMTYYDAGDSVQVFNSVWYPDAKYNLPVLGIDLLSFNRKKYLAIVDFQPLHESEDDHAATYEHILRPVKEQYENLKGRMSSKFYDETKFFSKEMLFARFEDGAVVGRDLFPAFQKYVETHADLVRRTPAATTAEEVEA-TFQRQRAYDTYSASRDPAAGLFAAMFGKTWAEDFIYDFLFSLSE 555 The following BLAST results are available for this feature:
BLAST of EWM23912.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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