EWM23911.1, cds6767 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|585105193|gb|EWM23911.1| (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1199.88 bits (3103), Expect = 0.000e+0 Identity = 585/585 (100.00%), Postives = 585/585 (100.00%), Query Frame = 0
Query: 1 MSHHASKFPHPANTTEQMSDNIRRKKFFFLPIRRHLRRRHPQSGHVTDIASRNTDASISSQYSPHHRIGKHNPEERRCRQQRPITSSSPPQSSRKEADRSPLRHGVLIPVEPLNLAASLEEVLRCYAVDRLMASAALLSALEQRIGIALKSDDALVREPAKVVRGCMQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEVACSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRAKTLVNYVIKRGAALSLSFLRSHAEKVLSLGAAHPLFPVLLADPFYRSFLAPRVLWYVRQHLSTTAEAARKGEDDGVPAILRLLHIDLAKAEACDPYPPARTTASTDPPPGPSRAWEPKDDKEGAKEKDKGDECLGRVPSISKGLEALKGAGGGEELGGEEHGVGECGPVTAKVLGVLGALVAVYVYIECQAWLYGC 585
MSHHASKFPHPANTTEQMSDNIRRKKFFFLPIRRHLRRRHPQSGHVTDIASRNTDASISSQYSPHHRIGKHNPEERRCRQQRPITSSSPPQSSRKEADRSPLRHGVLIPVEPLNLAASLEEVLRCYAVDRLMASAALLSALEQRIGIALKSDDALVREPAKVVRGCMQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEVACSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRAKTLVNYVIKRGAALSLSFLRSHAEKVLSLGAAHPLFPVLLADPFYRSFLAPRVLWYVRQHLSTTAEAARKGEDDGVPAILRLLHIDLAKAEACDPYPPARTTASTDPPPGPSRAWEPKDDKEGAKEKDKGDECLGRVPSISKGLEALKGAGGGEELGGEEHGVGECGPVTAKVLGVLGALVAVYVYIECQAWLYGC
Sbjct: 1 MSHHASKFPHPANTTEQMSDNIRRKKFFFLPIRRHLRRRHPQSGHVTDIASRNTDASISSQYSPHHRIGKHNPEERRCRQQRPITSSSPPQSSRKEADRSPLRHGVLIPVEPLNLAASLEEVLRCYAVDRLMASAALLSALEQRIGIALKSDDALVREPAKVVRGCMQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEVACSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRAKTLVNYVIKRGAALSLSFLRSHAEKVLSLGAAHPLFPVLLADPFYRSFLAPRVLWYVRQHLSTTAEAARKGEDDGVPAILRLLHIDLAKAEACDPYPPARTTASTDPPPGPSRAWEPKDDKEGAKEKDKGDECLGRVPSISKGLEALKGAGGGEELGGEEHGVGECGPVTAKVLGVLGALVAVYVYIECQAWLYGC 585
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|298710606|emb|CBJ32035.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 102.834 bits (255), Expect = 1.058e-19 Identity = 85/350 (24.29%), Postives = 163/350 (46.57%), Query Frame = 0
Query: 114 NLAASLEEVLRCYAVDRLMASAALLSALEQRIGIALKSDDALVREPAKVVRGCMQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEVA-CSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRA-KTLVNYVIKRGAALSLSFLRSHAEKVLSLGAAHPLFPVLLADPFYRSFLAPRVLWYVRQHLSTTAEAARKGE 461
N+ + EV C RL+ + LL+A+++ + + V+E ++ G E+ + +R R ++C+ + ++ + W + G T+++ DP+ S+ I++ G + + M+QLA +RE D + W+P C S+LL R G + ++++SM IP + D +LHA+G D +LE G ++I G R+ + VP GW R+ + FR + +V+SP ++ + +DPK +++VN+V+++ A + L L+ A+ + + ++ FY+ +L PR + R+ T E GE
Sbjct: 16 NVLELIAEVQLCREQARLLVAGRLLAAVDRYLASGQHAGRQEVKEAHALLAG-----ELKPLFDEVRQRAAECQSSLDDWQSPD-WLVAQTFMGITTFYK------------------------------VDPDGSLWIKMHGTMDDVTVMDQLAVVREVDLFNKWVPFCDTSKLLKRLGIVELLVYFSMSIPGVGR-DCVLHAYGCDSVLETGCILIQG---RSVEEVPEGVEVPQVKGWRHARMDVRAFRAKIEVLSPTSARTSIVANVDPKAPVPQSVVNFVVRKMAGMFLYCLKQTAKCIRADEGNCHRRRIVEDKAFYKGWLFPRFERFYRRQGWTVDEELGGGE 325
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|585109702|gb|EWM27447.1| (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 98.9821 bits (245), Expect = 1.357e-18 Identity = 73/283 (25.80%), Postives = 129/283 (45.58%), Query Frame = 0
Query: 167 MQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEVA-CSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSM---GIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRA--KTLVNYVIKRGAALSLSFLRSHAEKVLSLGAAHPLFPVLLADPFYRSFLAPRVL 443
M + E ++RLE +R R C++ ++ E W L G T+ R+ E ++++ R GE+ C + QLA +READ Y W+PL +S+++ R G +Q+LW+ + G+P F D +LH +G D ED +++ G SI + + P W RV + F I+ +++SP + I + LD K++ + ++NY K + FL ++ + P ++ ++PFY ++L P L
Sbjct: 99 MARSEDSQRLEELRRRVQVCRQAARDMQS-EDWELAHTEEGIQTFL-----------------RRDE------------GDNTLAWRTHGEIEDCPVVSQLAVLREADHYHDWIPLMDKSKVVKRLGKIEQMLWFRVAGRGLP--FVRDAVLHLYGCDASEED-LIILSGASIPEDEITESMGVRPPKKKWNHARVDIKYFSIQLRILSPTHTKIDLIYKLDVKIKFVPQKVINYFSKFLCGWVIWFLFQEMRRLQTDPVESPTAQLMRSEPFYANYLVPYCL 348
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|585107224|gb|EWM25463.1| (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 99.3673 bits (246), Expect = 4.196e-18 Identity = 86/356 (24.16%), Postives = 155/356 (43.54%), Query Frame = 0
Query: 130 RLMASAALLSALEQRIGIA---LKSDDALVREP-----AKVVRGCMQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEV-ACSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRA-KTLVNYVIKRGAALSLSFLRSHAEKVLSLG--AAHPLFPVLLADPFYRSFLAPRVLWYVRQHLSTTAEAARKGEDDGVPAILRLLH 473
R++A LL+ + R+ IA K +A V+E + +R MQ+ + ++L ++ RG +C E + E WTL + G T+ +P+G + ++VEGE S +QL +REA Y W P S L+H D ++ + + P +F D L+ + D +D ++I G S+ +D P L P GW R+S+ +FR + ++ N + + ++DP+ ++++N+ ++R + L L A+++ G V+ DP+Y PR+LWY +Q A G D + + + +H
Sbjct: 82 RILAYIQLLTE-DDRLMIAEDLRKKLEAFVKEQPLSQVKENIRRQMQESPLQEQLALLSRRGVECLEAAEDLASRENWTLAFRTFGFDTFVRPVG-------------------------------EQMYVKVEGEQEGTSIFDQLLVVREAAMYHRWGPFVCSSALVHSFKQLDLMVTFELNAP-LFHRDCLMRGYACDYSEKD-MILICGDSVVPAD-YPSLGLSTEPNGWLFKRMSITRFRCQVQLRGVNKGKVIMAALIDPRTALPQSVINFCLQRIVGVLLYLLLRTAQRLNQAGDKLGADFLQVIRRDPYYFRHCLPRILWYCQQKGWEYPVAGTMGGDMLLAGMAKAMH 402
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|1210530172|dbj|GAX11088.1| (hypothetical protein FisN_9Hh178 [Fistulifera solaris]) HSP 1 Score: 90.1225 bits (222), Expect = 4.374e-15 Identity = 84/341 (24.63%), Postives = 156/341 (45.75%), Query Frame = 0
Query: 119 LEEVLRCYAV---DRLMASAALLSALEQRIGIALKSDDAL-VREPAKVVRGCMQKPEMAKRLE---------VIRLRGSQCKELTNAA----------ETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEVACSPM-EQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRM-FTWDVLLHAWGADCMLEDGSVVIVG---GSIRASDRVPPE-------------RLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLR--AKTLVNYVIKRGAALSLSFLRSHAEKVL 416
L++V R +A+ +R + + L ++++RI + +D L V++ ++ +G ++K A E +++ + S+ +L N + T E WT S H G TY+ R++E DG S+ +++EGE+ P+ EQ+A +R D + W+P C S ++ + G D + W+ +GIP+ D A G D M EDGS++I G I D PPE +P P G+ R+++ +F + SP ++ L+P + ++ ++++ +K A + L+ L+S A+KV+
Sbjct: 30 LKDVERIFALIEDERHLIAHRLYESVQRRIR---QIEDQLPVKKKSRKFKGLLKKENAALTKEQEELQLAKNILKEKESELHKLENVSRIFYGALKNLNTDEDWTFASLHFGITTYY-----------------RREE--DG-----------SLSVKLEGELTGVPLFEQIAVLRAGDLHYKWVPFCSSSMIIAQLGKLDIINWFMIGIPQFGLARDGCYRAIGCDNMSEDGSIIIAGQGINDIMPGDH-PPEDPFLSNDPAVFALNIPPAPTKRGNGRMTIRKFETVVNITSPTSAKTRIVANLNPNIAFLSQGIIDFALKHLAGVVLAKLQSAAKKVV 336
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|1214685453|gb|OWZ02508.1| (Transmembrane protein, partial [Phytophthora megakarya]) HSP 1 Score: 86.6557 bits (213), Expect = 6.070e-14 Identity = 73/311 (23.47%), Postives = 140/311 (45.02%), Query Frame = 0
Query: 108 IPVEPLNLAASLEEVLRCYAVDRLMASAALLSALEQRIGIALKSDDALVREPAKVVRGCMQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEV-ACSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPP-AGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRA-KTLVNYVIKRGAALSLSFLRSHAEKV 415
+ V N+ ++V ++R+ ++ L+ LE + + ++ ++V +++R + E+ ++ R +G + + N E W Q G T LGVT K +E DG S+ I++EG V ++ +RE D Y +W P C +S LL G + + ++ P D ++ A+G + + E+ ++++GGS+ AS +P+P GW + R+ + FR + ++ N + +DPK K ++N+ IK+ A + L +R AEK+
Sbjct: 716 VTVTANNIDWVWQQVQLLKTMERIFSAGLLIDRLEAFLADSGSTNKSIVAAKTRILRAMQDEQELINHIKERRDQGVKALKEFNDKEGDGEW----QFGQTM-----LGVTTSWKPDE----------DG-----------SVWIKLEGLVDGVDIFNTISVIREVDLYSVWTPFCSQSLLLQDMGRVELAAYLAISSP-FLQRDTIIKAFGINAVYENRCLLLLGGSVEASSVT--TSVPIPTLQGWNAGRMEIKGFRALIEPLTRNQARTCIVANIDPKCAIPKAMLNFGIKKMAGILLYLIRKEAEKI 993
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|1173950290|gb|OQR98263.1| (transmembrane protein [Achlya hypogyna]) HSP 1 Score: 86.2705 bits (212), Expect = 6.532e-14 Identity = 88/322 (27.33%), Postives = 138/322 (42.86%), Query Frame = 0
Query: 129 DRLMASAALLSALEQRIGIALKSDDALVREPAKVVRGCMQKPEMAKRLEVIRLRGSQCKELTN--AAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEVACSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPPA-GWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRA-KTLVNYVIKRGAALSLSFLRSHAEKVLSL----GAAHPLFPVLLADPFYRSFLAPRV 442
+RL ++A L+ LEQ + L + PA + ++ LE+++ R Q + + A+ GW + G +T+++P G T L DG+ EG LA +RE D + LW P C +SELL G + + + S+ IP M D ++HA+G + E VV++G SI ++ P L PP GW + R+ L FR + N +DPK +L+N+ IK+ A + L L A KV G +P + DPFY ++L PR+
Sbjct: 548 ERLFSAAPLIEKLEQFLAARLDT-------PACAAIHAQLQAKLPA-LELVKERAVQGLQALHEFNADADAGWRFAQTYFGVSTHWKP----GNDATIWLKL-------DGIC---------------EG---VDIFNALAVVRETDLFNLWAPFCNKSELLANLGRVELITYLSVAIPLM-QRDAVVHAFGINATYEHRCVVLLGKSI-TEEQSPVNNLEFPPVKGWNADRMELRAFRALVEPYGRNRGRTCIVVNVDPKCPVPMSLLNFTIKKMAGVLLYLLMREAAKVEKHSDEPGTTNPHVLRIQNDPFY-AWLRPRM 829
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|953496048|emb|CEG42944.1| (START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer [Plasmopara halstedii]) HSP 1 Score: 85.1149 bits (209), Expect = 1.743e-13 Identity = 79/335 (23.58%), Postives = 149/335 (44.48%), Query Frame = 0
Query: 83 PITSSSPPQSSRKEADRSPLRHGVLIPVEPLNLAASLEEVLRCYAVDRLMASAALLSALEQRIGIALKSDDALVREPAKVVRGCMQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEV-ACSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRA-KTLVNYVIKRGAALSLSFLRSHAEKV 415
P ++S Q+ + + + L + V N+ ++VL+ +R+ ++ L+ LE +A ++D +V A++ + +K ++ ++ R RG + E N + W Q G T LGVT K +E DG S+ I++EG V ++ +RE D Y +W+P C +S LL G+ + + ++ P D ++ A+G + + E ++++GGS+ S +P GW + R+ + FR + ++ + LDPK K ++N+ IK+ A + L +R AEK+
Sbjct: 659 PTDNTSDTQNDQTKLETCELTDYSSVTVTVDNVDWVWQQVLKLKTTERVFSAGLLIDRLEA--FLADTNNDTIV--VARMKQTMDEKQKLVDYIQERRERGVKALEEFNNTKKDNDW----QFGQTM-----LGVTTSWKPDE----------DG-----------SVWIKLEGLVDGVDIFHTISVIREVDLYSVWIPFCSQSLLLQEMGHVELAAYLAISSP-FLQRDAIIRAFGINAVYEHRCLLLLGGSVDVSTITTSVSIP-TLQGWSAGRMEIKGFRALIEPLTRTQARTCIIANLDPKCAIPKAMLNFGIKKMAGILLYLIRKEAEKI 957
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|695394956|ref|XP_009521040.1| (hypothetical protein PHYSODRAFT_479879 [Phytophthora sojae] >gi|348685937|gb|EGZ25752.1| hypothetical protein PHYSODRAFT_479879 [Phytophthora sojae]) HSP 1 Score: 82.8037 bits (203), Expect = 1.015e-12 Identity = 75/328 (22.87%), Postives = 143/328 (43.60%), Query Frame = 0
Query: 91 QSSRKEADRSPLRHGVLIPVEPLNLAASLEEVLRCYAVDRLMASAALLSALEQRIGIALKSDDALVREPAKVVRGCMQKPEMAKRLEVIRLRGSQCKELTNAAETTEGWTLVSQHGGTATYFQPLGVTGRGKTEEASLQRKQEVEDGMVGEEVADPEHSIRIRVEGEV-ACSPMEQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRMFTWDVLLHAWGADCMLEDGSVVIVGGSIRASDRVPPERLPLPP-AGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRA-KTLVNYVIKRGAALSLSFLRSHAEKV 415
Q++ +D L + V NL ++V A +R+ ++A L+ LE + ++ + +V+R + E+ ++ R +G + + + E + W Q G T LGVT K D + S+ I++EG V ++ +RE D Y +W P C +S LL G+ + + ++ P D ++ A+G + + E+ ++++GGS+ S R+P+P GW + R+ + FR + ++ + +DPK K ++N+ IK+ A + L +R AEK+
Sbjct: 708 QTTDTNSDAYGLTDYSSVTVTAENLDWVWQQVQLLKATERIFSAALLIDRLEAFLTDTGSANKIIAAAKTRVLRAMHDERELIDHIKERRDQGVKALKEFSDKEGDDEW----QFGQTM-----LGVTTSWK---------------------PDADGSVWIKLEGLVDGVYIFNTISVIREVDLYSVWTPFCSQSLLLQDMGHVELAAYLAISSP-FLQRDAIIRAFGINAVYENRCLLLLGGSVDVS--TVTSRVPVPTLQGWNAGRMEIKGFRALIEPLTRTQARTCIVANIDPKCAIPKAMLNFGIKKMAGILLYLIRKEAEKI 1002
BLAST of EWM23911.1 vs. NCBI_GenBank
Match: gi|397563876|gb|EJK43974.1| (hypothetical protein THAOC_37531, partial [Thalassiosira oceanica]) HSP 1 Score: 80.8777 bits (198), Expect = 3.140e-12 Identity = 65/257 (25.29%), Postives = 108/257 (42.02%), Query Frame = 0
Query: 245 DPEHSIRIRVEGEVACSPM-EQLAAMREADQYKLWMPLCLESELLHREGNADQVLWWSMGIPRM-FTWDVLLHAWGADCMLEDGSVVIVGGSIRASDR-------------------------------------------------VPPERLPLPPAGWGSWRVSLHQFRIRFKVVSPNTSHITASFILDPKLRA--KTLVNYVIKRGAALSLSFLRSHAEKVLS--LGAAHPLFPVLLAD-PFYRSFLAPRVLWY 445
+ + S+ IR+ G++ P+ EQLA +RE D Y W P C+ S L + G D W+ +G+P + D A G D M EDGSV+IV + +D + +P P+G G R+++ F + V+ P ++ +DP L+ + L+++ +K+ + LS L++ A +VL +G AH + D FYR +L P+ Y
Sbjct: 133 ESDGSLSIRIAGDLVGVPLFEQLAILREVDLYHAWAPFCVSSRKLAQLGRLDVAAWYDVGVPIFGLSRDACYRAVGCDGMAEDGSVMIVAVGLNDTDEHGVVSSASLGKQTRKRGPSPPAAASDDDDAEGLEATEGSLLSSLARDEILSTLEMPPVPSGAGRGRMTIRNFSAKVDVLGPTSARTIMVVNVDPNLQLIPQALIDFSMKKMCGILLSRLQASARRVLKDPVGNAHA--RRMREDVTFYRDWLLPKFRAY 387 The following BLAST results are available for this feature:
BLAST of EWM23911.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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