EWM23896.1, cds6760 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|585105178|gb|EWM23896.1| (choline monooxygenase [Nannochloropsis gaditana]) HSP 1 Score: 1057.36 bits (2733), Expect = 0.000e+0 Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0
Query: 1 MPIAVTFRKHHKLLAIMKPPTVLVKARCLFRYRSPMLQLLSRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLRAAVGKIQGREGTHRPRWGKRGRML 511
MPIAVTFRKHHKLLAIMKPPTVLVKARCLFRYRSPMLQLLSRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLRAAVGKIQGREGTHRPRWGKRGRML
Sbjct: 1 MPIAVTFRKHHKLLAIMKPPTVLVKARCLFRYRSPMLQLLSRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLRAAVGKIQGREGTHRPRWGKRGRML 511
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|1126200620|ref|XP_019633636.1| (PREDICTED: choline monooxygenase, chloroplastic-like [Branchiostoma belcheri]) HSP 1 Score: 358.607 bits (919), Expect = 2.525e-116 Identity = 182/414 (43.96%), Postives = 248/414 (59.90%), Query Frame = 0
Query: 77 YLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLRAAV 490
Y+ E+ +F + P+E A+TPP+SWFTDPA + LE ++F N + VG T Q+ PG YF G VG PF+V+R+ S ++ F+NVCRH L ED G TC YHGW Y LDGRL KA R+ GI++F+ +++GL + + WGPLV +R E DG+ + L ++LD + GF+SGLR V RRRYRV CN KVV DNYLD GYHV Y H+ L + L + +Y V + YSVQ C G+ + + + R+GK ++Y +YP LM+NRYGPW+D NI P++ + ++I+DY+L E F A+ L GEA L+ +V+ SL SD+VQ+EDT++CE VQ GL S YD GRYAPRVE DH FH LA DL+ +
Sbjct: 30 YVAEEVQKFCTETPVERATTPPSSWFTDPAIYGLEKRTVFKWNWVAVGRTDQVASPGQYFTGVVGDEPFLVVRDKSNTLRGFFNVCRHHAAILAGEDEGTAD--AFTCCYHGWTYGLDGRLTKAMRLRGIQNFSARNFGLKPMAVKAWGPLVLVRPDGQE---------DGTDFETQVTSLKDQLD-DLGFTSGLRFVERRRYRVNCNWKVVLDNYLDGGYHVEYLHRNLASNLSIDTYRTDVQELYSVQTCSGS-------------------------AEDDQSMTRQRIGKTSIYGCVYPNLMINRYGPWLDTNIALPLTHDTTEVIYDYWLAEEF-AQTLR--GEAELQEFVQTSLTESDKVQQEDTFICERVQKGLRSSAYDVGRYAPRVEMADHAFHLKLASDLKQGI 403
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|802611350|ref|XP_012074438.1| (choline monooxygenase, chloroplastic [Jatropha curcas]) HSP 1 Score: 330.872 bits (847), Expect = 1.267e-105 Identity = 177/416 (42.55%), Postives = 236/416 (56.73%), Query Frame = 0
Query: 72 FQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
F + + ++ + FDP +PIE ASTPP+SW+TDP+F E+ +F VG T QI P D+F G++G+ F+V R G V AF+NVCRH G L+A +G+ ++ CPYH W Y LDG L KATR+ G+++F ++GL+ I + TWGP + L E E+ G +GS + G S L HV RR Y ++CN KV DNYLD GYHVPYAHKAL + L L SY SV+++ S+Q C G+ + S+ F RLG ALYA IYP M+NRYGPWMD N++ P+ +S C +IFDYF+ E KD +A ++E+SL+ S+ VQ ED LCE VQ GL S Y GRYAP VE H FHQ L +L+
Sbjct: 40 FSLQTHCQKLVDEFDPHIPIEKASTPPSSWYTDPSFFDYELHRVFYRGWQAVGYTEQIKDPRDFFTGRLGNVEFLVCRNDDGKVHAFHNVCRHHG-SLLASGSGQ--KSCFVCPYHAWTYGLDGALLKATRITGMQNFNLNEFGLIPINVATWGPFILLN---VEKESKLQQGVEGSMVENEWLGSCSEILKNGGVDSSLNHVCRRVYNMECNWKVFCDNYLDGGYHVPYAHKALASGLKLDSYSTSVYEKVSIQRCEGSSTQSADDF--------------------------GRLGSKALYAFIYPNFMINRYGPWMDTNLVLPLGTSKCQVIFDYFI------EAYHKDDKA----FIEQSLVDSERVQMEDILLCEGVQRGLHSPAYSVGRYAPTVEKAMHHFHQLLYDNLK 413
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|643727733|gb|KDP36056.1| (hypothetical protein JCGZ_10308 [Jatropha curcas]) HSP 1 Score: 330.487 bits (846), Expect = 1.736e-105 Identity = 177/416 (42.55%), Postives = 236/416 (56.73%), Query Frame = 0
Query: 72 FQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
F + + ++ + FDP +PIE ASTPP+SW+TDP+F E+ +F VG T QI P D+F G++G+ F+V R G V AF+NVCRH G L+A +G+ ++ CPYH W Y LDG L KATR+ G+++F ++GL+ I + TWGP + L E E+ G +GS + G S L HV RR Y ++CN KV DNYLD GYHVPYAHKAL + L L SY SV+++ S+Q C G+ + S+ F RLG ALYA IYP M+NRYGPWMD N++ P+ +S C +IFDYF+ E KD +A ++E+SL+ S+ VQ ED LCE VQ GL S Y GRYAP VE H FHQ L +L+
Sbjct: 38 FSLQTHCQKLVDEFDPHIPIEKASTPPSSWYTDPSFFDYELHRVFYRGWQAVGYTEQIKDPRDFFTGRLGNVEFLVCRNDDGKVHAFHNVCRHHG-SLLASGSGQ--KSCFVCPYHAWTYGLDGALLKATRITGMQNFNLNEFGLIPINVATWGPFILLN---VEKESKLQQGVEGSMVENEWLGSCSEILKNGGVDSSLNHVCRRVYNMECNWKVFCDNYLDGGYHVPYAHKALASGLKLDSYSTSVYEKVSIQRCEGSSTQSADDF--------------------------GRLGSKALYAFIYPNFMINRYGPWMDTNLVLPLGTSKCQVIFDYFI------EAYHKDDKA----FIEQSLVDSERVQMEDILLCEGVQRGLHSPAYSVGRYAPTVEKAMHHFHQLLYDNLK 411
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|502150350|ref|XP_004507911.1| (PREDICTED: choline monooxygenase, chloroplastic [Cicer arietinum]) HSP 1 Score: 325.094 bits (832), Expect = 2.163e-103 Identity = 173/410 (42.20%), Postives = 245/410 (59.76%), Query Frame = 0
Query: 79 KRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLA--YLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDL 486
+R + +F+P +P+E A TPP+SW+T P+F LE+ +F VGST QI PGD+F G++G F+V R+ SGNV AFYNVCRH ++A +G+ ++ CPYHGW Y L+G L KATR++G+RDF ++GL+ I + TWGP V L + EN + V SH +A +L E L + +G S L ++ RR Y ++CN KV DNYLD GYHVPYAHK L + L+L SY ++ ++ S+Q+C G+ S S + RLG+ A+YA +YP M+NRYGPWMD N++ P+ + C ++FDY+LE + L+ D ++E+SL S++VQ ED LCE VQ GL+S Y GRYAP+VE H FH L ++L
Sbjct: 46 QRLVQQFNPKIPVEEAVTPPSSWYTHPSFFHLELDRVFYKGWQAVGSTEQIKNPGDFFTGRLGDVEFVVCRDDSGNVHAFYNVCRHHA-SILASGSGQ--KSCFVCPYHGWTYGLNGTLLKATRISGMRDFNVNEFGLIPIKVATWGPFVLLNL-KKENLSEKEVD---SHNVAKEWLGSCSELL-STNGVDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDSYSITLFEKVSIQSCEGSSSEKSKE-------------------------NYDRLGRKAIYAFVYPNFMINRYGPWMDTNLVLPLGPNKCQVVFDYYLEPS-----LQDD-----TGFIEKSLQDSEKVQIEDILLCEGVQKGLQSPAYSVGRYAPKVEQAMHHFHCLLHENL 412
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|255554434|ref|XP_002518256.1| (PREDICTED: choline monooxygenase, chloroplastic isoform X1 [Ricinus communis] >gi|223542603|gb|EEF44142.1| choline monooxygenase, putative [Ricinus communis]) HSP 1 Score: 322.783 bits (826), Expect = 2.125e-102 Identity = 177/450 (39.33%), Postives = 246/450 (54.67%), Query Frame = 0
Query: 39 LLSRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHP-LAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
++SR+ + N SS T S ++ + + + + +FDP +P+E A TPP+SW+TDP+F+ E+ +F VG T QI P D+F G++G+ F+V R+ +G V AF+NVCRH G ++A G+ ++ CPYH W Y LDG L KATR+ G+++F+ +YGLL I + WGP V L + + V G + L LL+ +G S L +V RR Y ++CN KV DNYLD GYHVP+AHK+L + L L SY ++ +R S+Q C G S F RLG A+YA I+P M+NRYGPWMD N++ P+ S C +IFDYF+E + +K T+++ SLI S+ VQ ED LCE VQ GLES Y RGRYAP VE H FHQ L L+
Sbjct: 15 IVSRSLQIKNQSSV-----TAQHRSFHSLPKNSHSLQTHFQNLVNKFDPHIPVEEAFTPPSSWYTDPSFYDYELHCVFYKGWQAVGFTKQIKSPRDFFTGRLGNVEFVVCRDDNGKVHAFHNVCRHHG-SVLASGCGQ--KSCFVCPYHAWTYGLDGALLKATRITGMQNFSLDEYGLLPINVAAWGPFVLLNVDRESSPQQEVDGNMVENEWLGSCSGLLK----TNGVDSSLSYVCRRTYNIECNWKVFCDNYLDGGYHVPFAHKSLASGLKLDSYSTTIFERASIQKCEGGSMGSVDEF--------------------------DRLGSKAIYAFIFPNFMINRYGPWMDTNLVLPLGPSKCQVIFDYFVEADYKNDK----------TFIDRSLIDSERVQMEDIMLCEGVQRGLESPAYCRGRYAPTVEKAMHHFHQLLHGKLK 416
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|1012000534|ref|XP_015973237.1| (choline monooxygenase, chloroplastic [Arachis duranensis]) HSP 1 Score: 320.857 bits (821), Expect = 1.048e-101 Identity = 167/406 (41.13%), Postives = 234/406 (57.64%), Query Frame = 0
Query: 82 LARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
++ F+P +PIE A TPP SW+TDP+F LE+ IF VGST QI P +F G++G F+V R+ SG ++AF+NVCRH L+A +G ++ CPYHGW Y L G L KATR++G+R+F KD+GL+ I + TWGP + L E E+ ++ D ++ + + +G S L +V RR Y + CN KV DNYLD GYHVPYAHK L + L SY ++ +R S+Q+C G+ S ++ RLG+ A+YA IYP M+NRYGPWMD N++ P+ + C ++FDY+LE + K +KD ++E SL S++VQ ED LCE VQ GL+S Y GRYAP+VE H FH L ++L+
Sbjct: 54 VSEFNPKIPIEEAVTPPTSWYTDPSFFQLELHRIFYRGWQAVGSTEQIKDPNSFFTGRLGDVEFVVCRDESGKLQAFHNVCRHHA-SLLASGSGH--KSCFVCPYHGWTYGLSGALLKATRISGMRNFNVKDFGLIPIKVSTWGPFILLNL---EKESLPLMEIDSTYVAKEWLGSCSEILSTNGIDSSLNYVCRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASGLKFDSYSTTIFERVSIQSCEGSSGESKDNY--------------------------DRLGRKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVVFDYYLEHSL---KHDKD-------FIELSLQDSEKVQIEDIVLCEGVQKGLQSPAYYVGRYAPKVEQAMHHFHCLLYENLK 417
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|1021473997|ref|XP_016201893.1| (choline monooxygenase, chloroplastic [Arachis ipaensis]) HSP 1 Score: 320.087 bits (819), Expect = 2.136e-101 Identity = 167/406 (41.13%), Postives = 234/406 (57.64%), Query Frame = 0
Query: 82 LARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
++ F+P +PIE A TPP SW+TDP+F LE+ IF VGST QI P +F G++G F+V R+ SG ++AF+NVCRH L+A +G ++ CPYHGW Y L G L KATR++G+R+F KD+GL+ I + TWGP + L E E+ ++ D ++ + + +G S L +V RR Y + CN KV DNYLD GYHVPYAHK L + L SY ++ +R S+Q+C G+ S ++ RLG+ A+YA IYP M+NRYGPWMD N++ P+ + C ++FDY+LE + K +KD ++E SL S++VQ ED LCE VQ GL+S Y GRYAP+VE H FH L ++L+
Sbjct: 54 VSEFNPKIPIEEAVTPPTSWYTDPSFFQLELHRIFYRGWQAVGSTEQIRDPNSFFTGRLGDVEFVVCRDESGKLQAFHNVCRHHA-SLLASGSGH--KSCFVCPYHGWTYGLSGALLKATRISGMRNFNVKDFGLIPIKVSTWGPFILLNL---EKESLPLMEIDSTYVAKEWLGSCSEILSTNGIDSSLNYVCRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASGLKFDSYSTTIFERVSIQSCEGSSGESKDNY--------------------------DRLGRKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVVFDYYLEHSL---KHDKD-------FIELSLQDSEKVQIEDIVLCEGVQKGLQSPAYCVGRYAPKVEQAMHHFHCLLYENLK 417
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|1162516863|ref|XP_007225293.2| (choline monooxygenase, chloroplastic [Prunus persica] >gi|1139794557|gb|ONI27175.1| hypothetical protein PRUPE_1G072500 [Prunus persica]) HSP 1 Score: 320.087 bits (819), Expect = 2.495e-101 Identity = 166/406 (40.89%), Postives = 231/406 (56.90%), Query Frame = 0
Query: 82 LARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
+ +FDP +PIE A TPP+SW+TDP+F++LE+ ++F G T QI PG++F ++G+ F+V R+ G ++AF+NVCRH L+A +GR ++ CPYHGW Y LDG L KATR+ GI++F ++GL+ + TWGP V L Q + +V K+ +L E L + +G S L V RR Y ++CN KV DNYLD GYHVPYAHK L + L+L Y +++++ S+Q C G + + + RLG ALYA +YP M+NRYGPWMD N++ P+ C +IFDYF+E + + K ++E SL S+ VQ ED LCE VQ GLES YD GRYAP VE H FH L + L+
Sbjct: 54 VGQFDPTIPIERAVTPPSSWYTDPSFYSLELDTLFYRGWQAAGYTEQIKNPGEFFTCRLGNAEFVVCRDGDGKLQAFHNVCRHHA-SLLAYGSGR--KSCFVCPYHGWTYGLDGSLLKATRITGIQNFNEHEFGLISVKAATWGPFVLLNMEQDVDSDTDIVEKE------WLGSSSELL-SNNGVDSSLSFVCRRDYMIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDHYSTTIYEKVSIQKCEGGSTERTNDY--------------------------DRLGSKALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCQVIFDYFIEPSLMDNK----------DFIERSLKDSERVQVEDVVLCEGVQRGLESPAYDIGRYAPTVENAMHHFHCLLHKSLK 413
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|645234532|ref|XP_008223853.1| (PREDICTED: choline monooxygenase, chloroplastic [Prunus mume]) HSP 1 Score: 319.316 bits (817), Expect = 4.372e-101 Identity = 165/406 (40.64%), Postives = 231/406 (56.90%), Query Frame = 0
Query: 82 LARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
+ +FDP +PIE A TPP SW+TDP+F++LE+ ++F G T QI PG++F ++G+ F+V R+ G ++AF+NVCRH L+A +GR ++ CPYHGW Y LDG L KATR+ GI++F ++GL+ + + TWGP V L Q + +V K+ +L E L + +G S L V RR Y ++CN KV DNYLD GYHVPYAHK L + L+L Y +++++ S+Q C G + + + RLG ALYA +YP M+NRYGPWMD N++ P+ C +IFDY++E + + R ++E SL S+ VQ ED LCE VQ GLES YD GRYAP VE H FH L + L+
Sbjct: 54 VGQFDPTIPIERAVTPPCSWYTDPSFYSLELDTLFYRGWQAAGYTEQIKNPGEFFTCRLGNAEFVVCRDGDGKLQAFHNVCRHHA-SLLAYGSGR--KSCFVCPYHGWTYGLDGSLLKATRITGIQNFNEHEFGLISVKVATWGPFVLLNMEQDVDSDTDIVEKE------WLGSSSELL-SNNGVDSSLSFVCRRDYMIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDHYSTTIYEKVSIQKCEGGSTERTNDY--------------------------DRLGSKALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCQVIFDYYIEPSLMDN----------RDFIERSLKDSERVQLEDVMLCEGVQRGLESPAYDIGRYAPTVENAMHHFHCLLHKSLK 413 The following BLAST results are available for this feature:
BLAST of EWM23896.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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