EWM23896.1, cds6760 (CDS) Nannochloropsis gaditana

Overview
NameEWM23896.1
Unique Namecds6760
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:478703..479548 -
Alignment locationCM002469.1:477848..478537 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23896.1
Productcholine monooxygenase
Orig transcript idgnl|cribi|Naga_100113g3.9962.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:478703..479548 -
CM002469.1supercontigCM002469.1:477848..478537 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0019439aromatic compound catabolic process
GO:0055114oxidation-reduction process
GO:0006725cellular aromatic compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
GO:0016708oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor
GO:00515372 iron, 2 sulfur cluster binding
GO:0005506iron ion binding
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR015879Ring_hydroxy_dOase_asu_C_dom
IPR001663Rng_hydr_dOase-A
Homology
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|585105178|gb|EWM23896.1| (choline monooxygenase [Nannochloropsis gaditana])

HSP 1 Score: 1057.36 bits (2733), Expect = 0.000e+0
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0
Query:    1 MPIAVTFRKHHKLLAIMKPPTVLVKARCLFRYRSPMLQLLSRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLRAAVGKIQGREGTHRPRWGKRGRML 511
            MPIAVTFRKHHKLLAIMKPPTVLVKARCLFRYRSPMLQLLSRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLRAAVGKIQGREGTHRPRWGKRGRML
Sbjct:    1 MPIAVTFRKHHKLLAIMKPPTVLVKARCLFRYRSPMLQLLSRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLRAAVGKIQGREGTHRPRWGKRGRML 511          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|1126200620|ref|XP_019633636.1| (PREDICTED: choline monooxygenase, chloroplastic-like [Branchiostoma belcheri])

HSP 1 Score: 358.607 bits (919), Expect = 2.525e-116
Identity = 182/414 (43.96%), Postives = 248/414 (59.90%), Query Frame = 0
Query:   77 YLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLRAAV 490
            Y+  E+ +F  + P+E A+TPP+SWFTDPA + LE  ++F  N + VG T Q+  PG YF G VG  PF+V+R+ S  ++ F+NVCRH    L  ED G       TC YHGW Y LDGRL KA R+ GI++F+ +++GL  + +  WGPLV +R    E         DG+     +  L ++LD + GF+SGLR V RRRYRV CN KVV DNYLD GYHV Y H+ L + L + +Y   V + YSVQ C G+                         + +    +  R+GK ++Y  +YP LM+NRYGPW+D NI  P++  + ++I+DY+L E F A+ L   GEA L+ +V+ SL  SD+VQ+EDT++CE VQ GL S  YD GRYAPRVE  DH FH  LA DL+  +
Sbjct:   30 YVAEEVQKFCTETPVERATTPPSSWFTDPAIYGLEKRTVFKWNWVAVGRTDQVASPGQYFTGVVGDEPFLVVRDKSNTLRGFFNVCRHHAAILAGEDEGTAD--AFTCCYHGWTYGLDGRLTKAMRLRGIQNFSARNFGLKPMAVKAWGPLVLVRPDGQE---------DGTDFETQVTSLKDQLD-DLGFTSGLRFVERRRYRVNCNWKVVLDNYLDGGYHVEYLHRNLASNLSIDTYRTDVQELYSVQTCSGS-------------------------AEDDQSMTRQRIGKTSIYGCVYPNLMINRYGPWLDTNIALPLTHDTTEVIYDYWLAEEF-AQTLR--GEAELQEFVQTSLTESDKVQQEDTFICERVQKGLRSSAYDVGRYAPRVEMADHAFHLKLASDLKQGI 403          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|802611350|ref|XP_012074438.1| (choline monooxygenase, chloroplastic [Jatropha curcas])

HSP 1 Score: 330.872 bits (847), Expect = 1.267e-105
Identity = 177/416 (42.55%), Postives = 236/416 (56.73%), Query Frame = 0
Query:   72 FQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
            F  + + ++ +  FDP +PIE ASTPP+SW+TDP+F   E+  +F      VG T QI  P D+F G++G+  F+V R   G V AF+NVCRH G  L+A  +G+  ++   CPYH W Y LDG L KATR+ G+++F   ++GL+ I + TWGP + L     E E+    G +GS            +    G  S L HV RR Y ++CN KV  DNYLD GYHVPYAHKAL + L L SY  SV+++ S+Q C G+ + S+  F                           RLG  ALYA IYP  M+NRYGPWMD N++ P+ +S C +IFDYF+      E   KD +A    ++E+SL+ S+ VQ ED  LCE VQ GL S  Y  GRYAP VE   H FHQ L  +L+
Sbjct:   40 FSLQTHCQKLVDEFDPHIPIEKASTPPSSWYTDPSFFDYELHRVFYRGWQAVGYTEQIKDPRDFFTGRLGNVEFLVCRNDDGKVHAFHNVCRHHG-SLLASGSGQ--KSCFVCPYHAWTYGLDGALLKATRITGMQNFNLNEFGLIPINVATWGPFILLN---VEKESKLQQGVEGSMVENEWLGSCSEILKNGGVDSSLNHVCRRVYNMECNWKVFCDNYLDGGYHVPYAHKALASGLKLDSYSTSVYEKVSIQRCEGSSTQSADDF--------------------------GRLGSKALYAFIYPNFMINRYGPWMDTNLVLPLGTSKCQVIFDYFI------EAYHKDDKA----FIEQSLVDSERVQMEDILLCEGVQRGLHSPAYSVGRYAPTVEKAMHHFHQLLYDNLK 413          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|643727733|gb|KDP36056.1| (hypothetical protein JCGZ_10308 [Jatropha curcas])

HSP 1 Score: 330.487 bits (846), Expect = 1.736e-105
Identity = 177/416 (42.55%), Postives = 236/416 (56.73%), Query Frame = 0
Query:   72 FQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
            F  + + ++ +  FDP +PIE ASTPP+SW+TDP+F   E+  +F      VG T QI  P D+F G++G+  F+V R   G V AF+NVCRH G  L+A  +G+  ++   CPYH W Y LDG L KATR+ G+++F   ++GL+ I + TWGP + L     E E+    G +GS            +    G  S L HV RR Y ++CN KV  DNYLD GYHVPYAHKAL + L L SY  SV+++ S+Q C G+ + S+  F                           RLG  ALYA IYP  M+NRYGPWMD N++ P+ +S C +IFDYF+      E   KD +A    ++E+SL+ S+ VQ ED  LCE VQ GL S  Y  GRYAP VE   H FHQ L  +L+
Sbjct:   38 FSLQTHCQKLVDEFDPHIPIEKASTPPSSWYTDPSFFDYELHRVFYRGWQAVGYTEQIKDPRDFFTGRLGNVEFLVCRNDDGKVHAFHNVCRHHG-SLLASGSGQ--KSCFVCPYHAWTYGLDGALLKATRITGMQNFNLNEFGLIPINVATWGPFILLN---VEKESKLQQGVEGSMVENEWLGSCSEILKNGGVDSSLNHVCRRVYNMECNWKVFCDNYLDGGYHVPYAHKALASGLKLDSYSTSVYEKVSIQRCEGSSTQSADDF--------------------------GRLGSKALYAFIYPNFMINRYGPWMDTNLVLPLGTSKCQVIFDYFI------EAYHKDDKA----FIEQSLVDSERVQMEDILLCEGVQRGLHSPAYSVGRYAPTVEKAMHHFHQLLYDNLK 411          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|502150350|ref|XP_004507911.1| (PREDICTED: choline monooxygenase, chloroplastic [Cicer arietinum])

HSP 1 Score: 325.094 bits (832), Expect = 2.163e-103
Identity = 173/410 (42.20%), Postives = 245/410 (59.76%), Query Frame = 0
Query:   79 KRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLA--YLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDL 486
            +R + +F+P +P+E A TPP+SW+T P+F  LE+  +F      VGST QI  PGD+F G++G   F+V R+ SGNV AFYNVCRH    ++A  +G+  ++   CPYHGW Y L+G L KATR++G+RDF   ++GL+ I + TWGP V L   + EN +   V    SH +A  +L    E L + +G  S L ++ RR Y ++CN KV  DNYLD GYHVPYAHK L + L+L SY  ++ ++ S+Q+C G+ S  S                           +  RLG+ A+YA +YP  M+NRYGPWMD N++ P+  + C ++FDY+LE +     L+ D       ++E+SL  S++VQ ED  LCE VQ GL+S  Y  GRYAP+VE   H FH  L ++L
Sbjct:   46 QRLVQQFNPKIPVEEAVTPPSSWYTHPSFFHLELDRVFYKGWQAVGSTEQIKNPGDFFTGRLGDVEFVVCRDDSGNVHAFYNVCRHHA-SILASGSGQ--KSCFVCPYHGWTYGLNGTLLKATRISGMRDFNVNEFGLIPIKVATWGPFVLLNL-KKENLSEKEVD---SHNVAKEWLGSCSELL-STNGVDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDSYSITLFEKVSIQSCEGSSSEKSKE-------------------------NYDRLGRKAIYAFVYPNFMINRYGPWMDTNLVLPLGPNKCQVVFDYYLEPS-----LQDD-----TGFIEKSLQDSEKVQIEDILLCEGVQKGLQSPAYSVGRYAPKVEQAMHHFHCLLHENL 412          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|255554434|ref|XP_002518256.1| (PREDICTED: choline monooxygenase, chloroplastic isoform X1 [Ricinus communis] >gi|223542603|gb|EEF44142.1| choline monooxygenase, putative [Ricinus communis])

HSP 1 Score: 322.783 bits (826), Expect = 2.125e-102
Identity = 177/450 (39.33%), Postives = 246/450 (54.67%), Query Frame = 0
Query:   39 LLSRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHP-LAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
            ++SR+ +  N SS      T    S     ++    + + +  + +FDP +P+E A TPP+SW+TDP+F+  E+  +F      VG T QI  P D+F G++G+  F+V R+ +G V AF+NVCRH G  ++A   G+  ++   CPYH W Y LDG L KATR+ G+++F+  +YGLL I +  WGP V L   +  +    V G    +  L     LL+     +G  S L +V RR Y ++CN KV  DNYLD GYHVP+AHK+L + L L SY  ++ +R S+Q C G    S   F                           RLG  A+YA I+P  M+NRYGPWMD N++ P+  S C +IFDYF+E  +  +K          T+++ SLI S+ VQ ED  LCE VQ GLES  Y RGRYAP VE   H FHQ L   L+
Sbjct:   15 IVSRSLQIKNQSSV-----TAQHRSFHSLPKNSHSLQTHFQNLVNKFDPHIPVEEAFTPPSSWYTDPSFYDYELHCVFYKGWQAVGFTKQIKSPRDFFTGRLGNVEFVVCRDDNGKVHAFHNVCRHHG-SVLASGCGQ--KSCFVCPYHAWTYGLDGALLKATRITGMQNFSLDEYGLLPINVAAWGPFVLLNVDRESSPQQEVDGNMVENEWLGSCSGLLK----TNGVDSSLSYVCRRTYNIECNWKVFCDNYLDGGYHVPFAHKSLASGLKLDSYSTTIFERASIQKCEGGSMGSVDEF--------------------------DRLGSKAIYAFIFPNFMINRYGPWMDTNLVLPLGPSKCQVIFDYFVEADYKNDK----------TFIDRSLIDSERVQMEDIMLCEGVQRGLESPAYCRGRYAPTVEKAMHHFHQLLHGKLK 416          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|1012000534|ref|XP_015973237.1| (choline monooxygenase, chloroplastic [Arachis duranensis])

HSP 1 Score: 320.857 bits (821), Expect = 1.048e-101
Identity = 167/406 (41.13%), Postives = 234/406 (57.64%), Query Frame = 0
Query:   82 LARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
            ++ F+P +PIE A TPP SW+TDP+F  LE+  IF      VGST QI  P  +F G++G   F+V R+ SG ++AF+NVCRH    L+A  +G   ++   CPYHGW Y L G L KATR++G+R+F  KD+GL+ I + TWGP + L     E E+  ++  D ++           + + +G  S L +V RR Y + CN KV  DNYLD GYHVPYAHK L + L   SY  ++ +R S+Q+C G+   S  ++                           RLG+ A+YA IYP  M+NRYGPWMD N++ P+  + C ++FDY+LE +    K +KD       ++E SL  S++VQ ED  LCE VQ GL+S  Y  GRYAP+VE   H FH  L ++L+
Sbjct:   54 VSEFNPKIPIEEAVTPPTSWYTDPSFFQLELHRIFYRGWQAVGSTEQIKDPNSFFTGRLGDVEFVVCRDESGKLQAFHNVCRHHA-SLLASGSGH--KSCFVCPYHGWTYGLSGALLKATRISGMRNFNVKDFGLIPIKVSTWGPFILLNL---EKESLPLMEIDSTYVAKEWLGSCSEILSTNGIDSSLNYVCRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASGLKFDSYSTTIFERVSIQSCEGSSGESKDNY--------------------------DRLGRKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVVFDYYLEHSL---KHDKD-------FIELSLQDSEKVQIEDIVLCEGVQKGLQSPAYYVGRYAPKVEQAMHHFHCLLYENLK 417          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|1021473997|ref|XP_016201893.1| (choline monooxygenase, chloroplastic [Arachis ipaensis])

HSP 1 Score: 320.087 bits (819), Expect = 2.136e-101
Identity = 167/406 (41.13%), Postives = 234/406 (57.64%), Query Frame = 0
Query:   82 LARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
            ++ F+P +PIE A TPP SW+TDP+F  LE+  IF      VGST QI  P  +F G++G   F+V R+ SG ++AF+NVCRH    L+A  +G   ++   CPYHGW Y L G L KATR++G+R+F  KD+GL+ I + TWGP + L     E E+  ++  D ++           + + +G  S L +V RR Y + CN KV  DNYLD GYHVPYAHK L + L   SY  ++ +R S+Q+C G+   S  ++                           RLG+ A+YA IYP  M+NRYGPWMD N++ P+  + C ++FDY+LE +    K +KD       ++E SL  S++VQ ED  LCE VQ GL+S  Y  GRYAP+VE   H FH  L ++L+
Sbjct:   54 VSEFNPKIPIEEAVTPPTSWYTDPSFFQLELHRIFYRGWQAVGSTEQIRDPNSFFTGRLGDVEFVVCRDESGKLQAFHNVCRHHA-SLLASGSGH--KSCFVCPYHGWTYGLSGALLKATRISGMRNFNVKDFGLIPIKVSTWGPFILLNL---EKESLPLMEIDSTYVAKEWLGSCSEILSTNGIDSSLNYVCRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASGLKFDSYSTTIFERVSIQSCEGSSGESKDNY--------------------------DRLGRKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVVFDYYLEHSL---KHDKD-------FIELSLQDSEKVQIEDIVLCEGVQKGLQSPAYCVGRYAPKVEQAMHHFHCLLYENLK 417          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|1162516863|ref|XP_007225293.2| (choline monooxygenase, chloroplastic [Prunus persica] >gi|1139794557|gb|ONI27175.1| hypothetical protein PRUPE_1G072500 [Prunus persica])

HSP 1 Score: 320.087 bits (819), Expect = 2.495e-101
Identity = 166/406 (40.89%), Postives = 231/406 (56.90%), Query Frame = 0
Query:   82 LARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
            + +FDP +PIE A TPP+SW+TDP+F++LE+ ++F       G T QI  PG++F  ++G+  F+V R+  G ++AF+NVCRH    L+A  +GR  ++   CPYHGW Y LDG L KATR+ GI++F   ++GL+ +   TWGP V L   Q  +    +V K+      +L    E L + +G  S L  V RR Y ++CN KV  DNYLD GYHVPYAHK L + L+L  Y  +++++ S+Q C G  +  +  +                           RLG  ALYA +YP  M+NRYGPWMD N++ P+    C +IFDYF+E + +  K           ++E SL  S+ VQ ED  LCE VQ GLES  YD GRYAP VE   H FH  L + L+
Sbjct:   54 VGQFDPTIPIERAVTPPSSWYTDPSFYSLELDTLFYRGWQAAGYTEQIKNPGEFFTCRLGNAEFVVCRDGDGKLQAFHNVCRHHA-SLLAYGSGR--KSCFVCPYHGWTYGLDGSLLKATRITGIQNFNEHEFGLISVKAATWGPFVLLNMEQDVDSDTDIVEKE------WLGSSSELL-SNNGVDSSLSFVCRRDYMIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDHYSTTIYEKVSIQKCEGGSTERTNDY--------------------------DRLGSKALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCQVIFDYFIEPSLMDNK----------DFIERSLKDSERVQVEDVVLCEGVQRGLESPAYDIGRYAPTVENAMHHFHCLLHKSLK 413          
BLAST of EWM23896.1 vs. NCBI_GenBank
Match: gi|645234532|ref|XP_008223853.1| (PREDICTED: choline monooxygenase, chloroplastic [Prunus mume])

HSP 1 Score: 319.316 bits (817), Expect = 4.372e-101
Identity = 165/406 (40.64%), Postives = 231/406 (56.90%), Query Frame = 0
Query:   82 LARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFGQAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGAPSTSSPSFPPSTSAFSSSSPFPPRISPNHGGGSATRLGKAALYAHIYPGLMLNRYGPWMDLNILFPVSSSSCDLIFDYFLEETFIAEKLEKDGEAGLRTYVEESLIASDEVQREDTYLCENVQAGLESGGYDRGRYAPRVEFLDHVFHQWLAQDLR 487
            + +FDP +PIE A TPP SW+TDP+F++LE+ ++F       G T QI  PG++F  ++G+  F+V R+  G ++AF+NVCRH    L+A  +GR  ++   CPYHGW Y LDG L KATR+ GI++F   ++GL+ + + TWGP V L   Q  +    +V K+      +L    E L + +G  S L  V RR Y ++CN KV  DNYLD GYHVPYAHK L + L+L  Y  +++++ S+Q C G  +  +  +                           RLG  ALYA +YP  M+NRYGPWMD N++ P+    C +IFDY++E + +            R ++E SL  S+ VQ ED  LCE VQ GLES  YD GRYAP VE   H FH  L + L+
Sbjct:   54 VGQFDPTIPIERAVTPPCSWYTDPSFYSLELDTLFYRGWQAAGYTEQIKNPGEFFTCRLGNAEFVVCRDGDGKLQAFHNVCRHHA-SLLAYGSGR--KSCFVCPYHGWTYGLDGSLLKATRITGIQNFNEHEFGLISVKVATWGPFVLLNMEQDVDSDTDIVEKE------WLGSSSELL-SNNGVDSSLSFVCRRDYMIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDHYSTTIYEKVSIQKCEGGSTERTNDY--------------------------DRLGSKALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCQVIFDYYIEPSLMDN----------RDFIERSLKDSERVQLEDVMLCEGVQRGLESPAYDIGRYAPTVENAMHHFHCLLHKSLK 413          
The following BLAST results are available for this feature:
BLAST of EWM23896.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105178|gb|EWM23896.1|0.000e+0100.00choline monooxygenase [Nannochloropsis gaditana][more]
gi|1126200620|ref|XP_019633636.1|2.525e-11643.96PREDICTED: choline monooxygenase, chloroplastic-li... [more]
gi|802611350|ref|XP_012074438.1|1.267e-10542.55choline monooxygenase, chloroplastic [Jatropha cur... [more]
gi|643727733|gb|KDP36056.1|1.736e-10542.55hypothetical protein JCGZ_10308 [Jatropha curcas][more]
gi|502150350|ref|XP_004507911.1|2.163e-10342.20PREDICTED: choline monooxygenase, chloroplastic [C... [more]
gi|255554434|ref|XP_002518256.1|2.125e-10239.33PREDICTED: choline monooxygenase, chloroplastic is... [more]
gi|1012000534|ref|XP_015973237.1|1.048e-10141.13choline monooxygenase, chloroplastic [Arachis dura... [more]
gi|1021473997|ref|XP_016201893.1|2.136e-10141.13choline monooxygenase, chloroplastic [Arachis ipae... [more]
gi|1162516863|ref|XP_007225293.2|2.495e-10140.89choline monooxygenase, chloroplastic [Prunus persi... [more]
gi|645234532|ref|XP_008223853.1|4.372e-10140.64PREDICTED: choline monooxygenase, chloroplastic [P... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6776rna6776Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications