EWM23894.1, cds6759 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|585105176|gb|EWM23894.1| (serine threonine-protein phosphatase pp1, partial [Nannochloropsis gaditana]) HSP 1 Score: 277.715 bits (709), Expect = 1.737e-94 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 REGGREGSGFEGSLTRRSLETVCAGRQTRKRKGFTFLTTLTRLPPQVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAPGLMGNGKK 138
REGGREGSGFEGSLTRRSLETVCAGRQTRKRKGFTFLTTLTRLPPQVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAPGLMGNGKK
Sbjct: 1 REGGREGSGFEGSLTRRSLETVCAGRQTRKRKGFTFLTTLTRLPPQVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAPGLMGNGKK 138
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|553184953|ref|XP_005854177.1| (protein phosphatase 1, catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422294888|gb|EKU22188.1| protein phosphatase 1, catalytic subunit, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 192.971 bits (489), Expect = 1.291e-57 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAPGLMGNGKK 138
QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAPGLMGNGKK
Sbjct: 307 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAPGLMGNGKK 399
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|1048062084|ref|XP_017463069.1| (PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit-like, partial [Rhagoletis zephyria]) HSP 1 Score: 132.88 bits (333), Expect = 3.955e-37 Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAPGL 132
QVVEDGYEFFA+RQLVT+FSAPNYCGEFDNAG MMSVDETLMCSFQILKP+EKK +Y Y GL GRP TPP+AP +
Sbjct: 74 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGL-----------NSGRPVTPPRAPAI 149
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|813172789|ref|XP_012204847.1| (serine/threonine-protein phosphatase PP1 [Saprolegnia parasitica CBS 223.65] >gi|641530284|gb|KDO24417.1| serine/threonine-protein phosphatase PP1 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 136.346 bits (342), Expect = 1.503e-36 Identity = 65/83 (78.31%), Postives = 71/83 (85.54%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPK 128
QVVEDGYEFFA+RQLVT+FSAPNYCGEFDNAGAMMSVDE+LMCSFQILKPAEKKQR+AY G+ GA G RPATPP+
Sbjct: 241 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPAEKKQRFAYQGMGGA--------GAQRPATPPR 315
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|669150800|ref|XP_008610962.1| (serine/threonine-protein phosphatase PP1 [Saprolegnia diclina VS20] >gi|530737403|gb|EQC35645.1| serine/threonine-protein phosphatase PP1 [Saprolegnia diclina VS20]) HSP 1 Score: 136.346 bits (342), Expect = 1.989e-36 Identity = 65/83 (78.31%), Postives = 71/83 (85.54%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPK 128
QVVEDGYEFFA+RQLVT+FSAPNYCGEFDNAGAMMSVDE+LMCSFQILKPAEKKQR+AY G+ GA G RPATPP+
Sbjct: 264 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPAEKKQRFAYQGMGGA--------GAQRPATPPR 338
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|1028534691|gb|OAJ07837.1| (Serine/threonine-protein phosphatase PP1 [Tilletia indica] >gi|1028547757|gb|OAJ18229.1| Serine/threonine-protein phosphatase PP1 [Tilletia walkeri] >gi|1028556741|gb|OAJ26636.1| Serine/threonine-protein phosphatase PP1 [Tilletia caries] >gi|1028559930|gb|OAJ29424.1| Serine/threonine-protein phosphatase PP1 [Tilletia controversa]) HSP 1 Score: 136.346 bits (342), Expect = 2.149e-36 Identity = 64/85 (75.29%), Postives = 70/85 (82.35%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAP 130
QVVEDGYEFFA+RQLVT+FSAPNYCGEFDNAGAMMSVDETL+CSFQILKPAEKKQ+YAYAG+ GRP TPP+ P
Sbjct: 251 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLLCSFQILKPAEKKQKYAYAGI-----------NMGRPVTPPRKP 324
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|1173927022|gb|OQR81109.1| (serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Achlya hypogyna]) HSP 1 Score: 135.961 bits (341), Expect = 2.266e-36 Identity = 65/83 (78.31%), Postives = 71/83 (85.54%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPK 128
QVVEDGYEFFA+RQLVT+FSAPNYCGEFDNAGAMMSVDE+LMCSFQILKPAEKKQR+AY G+ GA G RPATPP+
Sbjct: 250 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPAEKKQRFAYQGMGGA--------GAQRPATPPR 324
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|298713802|emb|CBJ27174.1| (phosphatase PP1 [Ectocarpus siliculosus]) HSP 1 Score: 136.346 bits (342), Expect = 2.681e-36 Identity = 64/85 (75.29%), Postives = 70/85 (82.35%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPKAP 130
QVVEDGYEFFARR LVT+FSAPNYCGEFDNAGAMMSVD+TLMCSFQILKPAEK+QR+ YAG+ G G G RP TPP+ P
Sbjct: 251 QVVEDGYEFFARRHLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPAEKRQRFNYAGVNQQG---GGAPGTSRPVTPPRGP 332
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|301115380|ref|XP_002905419.1| (serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Phytophthora infestans T30-4] >gi|675172941|ref|XP_008895355.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica INRA-310] >gi|695463418|ref|XP_009538713.1| hypothetical protein PHYSODRAFT_356184 [Phytophthora sojae] >gi|262110208|gb|EEY68260.1| serine/threonine-protein phosphatase PP1-gamma catalytic subunit [Phytophthora infestans T30-4] >gi|348666024|gb|EGZ05852.1| hypothetical protein PHYSODRAFT_356184 [Phytophthora sojae] >gi|566015591|gb|ETI38502.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica P1569] >gi|567953058|gb|ETK78718.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica] >gi|567981713|gb|ETL32149.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica] >gi|568011214|gb|ETL85392.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica] >gi|568041122|gb|ETM38546.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica] >gi|568104874|gb|ETN19519.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica INRA-310] >gi|570319333|gb|ETO67281.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica P1976] >gi|570943153|gb|ETP08410.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica CJ01A1] >gi|570973974|gb|ETP36467.1| serine/threonine-protein phosphatase PP1-beta catalytic subunit [Phytophthora parasitica P10297] >gi|970640694|gb|KUF83124.1| Serine/threonine-protein phosphatase [Phytophthora nicotianae] >gi|1214710847|gb|OWZ21900.1| Serine/threonine-protein phosphatase [Phytophthora megakarya]) HSP 1 Score: 135.576 bits (340), Expect = 3.293e-36 Identity = 66/83 (79.52%), Postives = 69/83 (83.13%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPK 128
QVVEDGYEFFA+RQLVT+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAY GL G RPATPP+
Sbjct: 251 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYNGL-----------GTQRPATPPR 322
BLAST of EWM23894.1 vs. NCBI_GenBank
Match: gi|134054929|emb|CAK36941.1| (unnamed protein product, partial [Aspergillus niger]) HSP 1 Score: 129.413 bits (324), Expect = 5.966e-36 Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 0
Query: 46 QVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRYAYAGLTGAGIGLGAGGGGGRPATPPK 128
QVVEDGYEFF++RQLVT+FSAPNYCGEFDNAGAMMSVDE+L+CSFQILKPAEKKQ+Y Y G++ GRP TPP+
Sbjct: 55 QVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEKKQKYVYGGMS-----------SGRPITPPR 126 The following BLAST results are available for this feature:
BLAST of EWM23894.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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