EWM23921.1, cds6757 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|585105206|gb|EWM23921.1| (ubiquitin-protein ligase, partial [Nannochloropsis gaditana]) HSP 1 Score: 1223.38 bits (3164), Expect = 0.000e+0 Identity = 609/609 (100.00%), Postives = 609/609 (100.00%), Query Frame = 0
Query: 1 HMVSLLMPPMASPLARSQEEIKDTLGDADPASHVLAHAAARELVSSGGVREECWVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHDGLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQKLRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAGVDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
HMVSLLMPPMASPLARSQEEIKDTLGDADPASHVLAHAAARELVSSGGVREECWVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHDGLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQKLRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAGVDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS
Sbjct: 1 HMVSLLMPPMASPLARSQEEIKDTLGDADPASHVLAHAAARELVSSGGVREECWVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHDGLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQKLRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAGVDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|831760331|ref|XP_012749920.1| (hypothetical protein SAMD00019534_102150 [Acytostelium subglobosum LB1] >gi|735850552|dbj|GAM27040.1| hypothetical protein SAMD00019534_102150 [Acytostelium subglobosum LB1]) HSP 1 Score: 295.819 bits (756), Expect = 3.255e-83 Identity = 185/572 (32.34%), Postives = 285/572 (49.83%), Query Frame = 0
Query: 54 WVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHD--------------GLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQKLRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGG--VGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAGVDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
++ + L+ ++ ++LQDP+AL LP WC QLL Y PFL F ++ +F+ +SFG+ RA+ L QQRQ + Q T + +G+++ G + R P + KV++ R ++L SA KV+E +G + +LE E+F E GTG GPT EFF+LVS+E+R +L LW ++ + GL+P+P RP + L F LG + +A D+RL+D+ F+ P +A + ++ + ++A L L A L +A +S + + Q+++ + + A D+ LCL F LPG P+ L D G V NL Y+ ++ L V QV A G I P +L+ F+ E+ +++ G GS+ + ++E+ CDHGYT S AV+ +I++E + EE + FL+F+TGSP LP+ G G PRLT+VKK H L A D L S +CTNY+KLPDYSSR +M+ +LL +++ GQ SFHLS
Sbjct: 1324 FISQKLTAKVMRQLQDPLALCGGALPDWCKQLLTYCPFLFPFECKRLFFYSTSFGIARALSTL--QQRQDLIRQ------------TSESSRNGNNNPG------EVRVGRIP-----RQKVRIYRNRILDSAIKVMELYGKTKSILEVEYFGEVGTGLGPTLEFFTLVSREVRRKDLNLWYSDTESNAASTDASPYVFNAGGLFPKPV-------------------RPGTLPKKTLDYFKFLGTFVAKAFYDQRLVDLPFSKPFYKYMANKDLE------FGDLAVIAPSMASSLNNLYA---LVLKIKAIKSSKSIDDQQKQTDIAALRIDGAKVDD----LCLDFVLPGHPQWEL----------------KDNGSNISVNIFNLEEYLNLIVMNFLYSGVIQQVDAFKEGFNQIFPITSLFPFSVAEVESLLCGALTGSDSDWTVDALMESTKCDHGYTNSSIAVQNFFKIMSEFSTEERKQFLLFITGSPHLPIQGFKGLNPRLTIVKK----HLNTL--AAADDSLLSVMSCTNYIKLPDYSSRDIMKSKLLYAMKEGQSSFHLS 1816
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|284019004|gb|ADB64456.1| (KAKTUS 1, partial [Artemisia annua]) HSP 1 Score: 267.314 bits (682), Expect = 4.856e-79 Identity = 181/554 (32.67%), Postives = 269/554 (48.56%), Query Frame = 0
Query: 68 QDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHD------GLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQK-LRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAG-----VDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
QD +AL + LP WC QL + PFL F R++YF+ ++FGL RA++RL QQ+QG DG G R +++ KV+VSR ++L SA KV+E + S++ +LE E+F E GTG GPT EF++L+S +++ +L +WR S D GL+P+PW S +G + K + F LG ++ +AL D RLLD+ + + G++ L ++ D+ L + LQ L A Q+ E+ RSE + + V LCL F LPG P+ L K G EDV NL YV V+ ++ + Q+ A G + AL +F+ +E+ +V G +E+ + ++++E + DHGYT S AV L+EIL E E++R F FVTG+P LP GGL P+LT+V+K + + A D LPS TC NYLKLP YS++ +M ++LL ++ GQ SF LS
Sbjct: 1 QDVLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRL--QQQQGADGNGSTNE------------------------------REMRVGRLRRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQRADLRMWRSSSFDDVIIAPLGLFPRPWPLTANSS--------------DGSKFAKVIEYFRLLGCVMAKALQDGRLLDLPLSTAFYKLVLGQELD------LMDVSSFDAELGKTLQELQALVCRKQYLESMSGHDRSEMLDLKFRGAP-----------VEDLCLDFTLPGYPDFTL--------KSG----------DEDVNINNLEEYVSLVVSATVKTGITRQMEAFRAGFNQVFDISALQIFSPDELDYLVCG-HTELW-EADKLVEHIKFDHGYTSKSPAVVNLLEILGEFNPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTASNVASSANGLSEPADDDLPSVMTCANYLKLPSYSTKEIMYKQLLYAISEGQGSFDLS 471
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|929766289|ref|XP_014158125.1| (hypothetical protein SARC_03555 [Sphaeroforma arctica JP610] >gi|906955443|gb|KNC84223.1| hypothetical protein SARC_03555 [Sphaeroforma arctica JP610]) HSP 1 Score: 281.952 bits (720), Expect = 1.439e-78 Identity = 180/553 (32.55%), Postives = 274/553 (49.55%), Query Frame = 0
Query: 57 KPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHDGLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQKLRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAGVDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
K L+ ++ ++L DP+ LA+ +P WCD L FLL + R+ Y H ++FG+ RA+ L +Q Q GGT Q + +Q+ KV+++R +L + +K++ + S ++LE E+ NE GTG GPT EF++LVS+E ++ L +WR + GLYP P PT R ++ R F LG+ +G+AL D +++DI F+ L+ L + + +E +D AL R + AL + Q +E ++ + +E+E + A ++ LCL F +PG P+I L+ GG + V LG Y++ V++ L ++V Q+ A +G +++ AL FT E+ M+ G+E D E + DHGYT S AV+ L I+A T +E+R FL F+TGSP LPVGGL P LT+V+K + + D LPS TCTNYLKLPDYSSR VM ERL+ ++ G SFH+S
Sbjct: 1126 KTLNAKICRQLIDPLTLASASVPEWCDALCHRCGFLLPMKTRQSYLHATTFGIARALTNLQKQTEQS--------------GGT--------------------QKAELRIARIQRAKVKINRDSMLDACKKLMSRYASSHMMLEIEYKNEVGTGLGPTLEFYTLVSREFQADELAMWREKQQTVGLYPAPL--PTDIKSSR----------------KRCRMFRTLGQFVGKALWDSKMIDIPFSQTLLRWLLFEEDQFRITT----LEDIDPALCRTITAL---DDVRQQYEVIDTNEALTDEEKEAQINALRLNGATVED----LCLDFTIPGYPDIELIP----------------GGADQTVDIHRLGQYIRLVVKTILVDSVAQQMEAFRSGFDEVISLTALKGFTPNELALML--FGAEEKWDVETLAANTKPDHGYTSESAAVKNLFFIMANYTPDEKRKFLQFITGSPRLPVGGLKSLQPPLTIVRKAPDDSMQP------DDFLPSVMTCTNYLKLPDYSSREVMAERLVTAINEGTGSFHMS 1591
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|674921136|emb|CDY12090.1| (BnaC03g60060D [Brassica napus]) HSP 1 Score: 275.404 bits (703), Expect = 1.739e-78 Identity = 186/600 (31.00%), Postives = 286/600 (47.67%), Query Frame = 0
Query: 44 VSSGGVREECWVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHD----------------------------GLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQKLRQ-FACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQN-LGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAG----VDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
++ V E ++ L+ ++A+++QD +AL + LP WC QL PFL F+ R++YF+ ++FGL RA++RL QQQ G G G R G +Q+ KV+VSR ++L SA KV+E + S++ +LE E+F E GTG GPT EF++L+S +++ +LG+WR S GL+P+PW S EG R K+ + F LGR++ +AL D RL+D+ + + G++ L ++ D+ L + LQ L G + EA E G S ++ + R+ LCL F LPG PE +L P G+D+ N L Y+ V+ ++ V Q+ A +G + +L VFT E+ ++ G + E ++E + DHGYT S A+ +L+EI+ E+T +++R F FVTG+P LP GGL P+LT+V+K++ A G D LPS TC NYLKLP YS++ +M ++LL ++ GQ SF LS
Sbjct: 337 TTAAKVSHEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTTACPFLFPFQTRRQYFYSTAFGLSRALNRLQQQQ-----------GADGSGSTNEREMRIGR---------------------LQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVSLGMWRSNSGDKLSMQTDRDEIQDGKSAAARDRDIVQAPFGLFPRPWPSTADVS--------------EGSRFHKVVEYFRLLGRVMAKALQDGRLMDVPLSTAFYKLILGQELD------LHDVILFDAELGKTLQELRVLVGRKHYLEA-EGGDNS----------SVISDLCLRGSRIEDLCLDFTLPGYPEY-ILRP------------------GDDIVDINSLEDYISLVVDATVKRGVARQIEAFRSGFNQVFDIKSLQVFTPSELDYLL--CGRRELWEAETLVEHIKFDHGYTAKSPAIIFLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTSNAAANGTGASETADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS 852
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|970057823|ref|XP_015055581.1| (PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Solanum pennellii]) HSP 1 Score: 281.182 bits (718), Expect = 2.967e-78 Identity = 196/607 (32.29%), Postives = 298/607 (49.09%), Query Frame = 0
Query: 44 VSSGGVR--EECWVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRG-----------ESHHD---------------GLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQK-LRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADER---VSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAG---------VDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
+S+ G++ E +V L+ ++A+++QD +AL + LP WC QL + PFL F R++YF+ ++FGL RA++RL QQ+QG DG +G +H+ R +Q+ KV+VSR ++L SA KV+E + S++ +LE E+F E GTG GPT EF++L+S +++ LG+WR E H D GL+P+PWS TG +GG+ K + F LGR++ +AL D RLLD+ + + G++ L ++ D+ L + LQ L A Q+ E+ + + ES D R V LCL F LPG PE L K G E+V NL Y+ V+ ++ +R Q+ A +G + AL +F+ E+ ++ G E+ K PE +++ + DHG+T S + L+EI+ E T E++R F FVTG+P LP GGL P+LT+V+K H+ + G A D LPS TC NYLKLP YS++ +M ++LL ++ GQ SF LS
Sbjct: 1330 LSTTGIKIPSEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRL--QQQQGADG-------------------NGSTHE-----------RAVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLISHDLQKLGLGMWRSGLSLTSNEHSVEVHMDNKLSRSNGDLVQAPLGLFPRPWSPHTGTV--------------DGGQFCKAIEYFRLLGRVMAKALQDGRLLDLPLSMAFYKLVLGQELD------LYDILSFDAELGKTLQELQALVSRKQYIESIKDQN--------------LDESYDMHFRGTPVEDLCLDFTLPGYPEYIL--------KAG----------DENVDLSNLEEYISLVVDATVKTGIRQQMEAFRSGFNQVFDFSALQIFSPSELDYLLCG-RRELWK-PETLVDHIKFDHGFTSKSPPIIHLLEIMGEFTPEQQRAFCQFVTGAPRLPAGGLASLNPKLTIVRK----HSSSAGNAAHNSNAPSESADEDLPSVMTCANYLKLPPYSTKEIMSKKLLYAINEGQGSFDLS 1846
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|723736120|ref|XP_010327414.1| (PREDICTED: E3 ubiquitin-protein ligase UPL3 [Solanum lycopersicum]) HSP 1 Score: 281.182 bits (718), Expect = 3.453e-78 Identity = 194/600 (32.33%), Postives = 293/600 (48.83%), Query Frame = 0
Query: 49 VREECWVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRG-----------ESHHD---------------GLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQK-LRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADER---VSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAG---------VDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
+ E +V L+ ++A+++QD +AL + LP WC QL + PFL F R++YF+ ++FGL RA++RL QQ+QG DG +G +H+ R +Q+ KV+VSR ++L SA KV+E + S++ +LE E+F E GTG GPT EF++L+S +++ LG+WR E H D GL+P+PWS TG +GG+ K + F LGR++ +AL D RLLD+ + + G++ L ++ D+ L + LQ L A Q+ E+ + + ES D R V LCL F LPG PE L K G E+V NL Y+ V+ ++ +R Q+ A +G + AL +F+ E+ ++ G E+ K PE +++ + DHG+T S + L+EI+ E T E++R F FVTG+P LP GGL P+LT+V+K H+ + G A D LPS TC NYLKLP YS++ +M ++LL ++ GQ SF LS
Sbjct: 1337 IPSEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRL--QQQQGADG-------------------NGSTHE-----------RAVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLISHDLQKLGLGMWRSGLSLTSNEHSVEVHIDNKLSRSDGDLVQAPLGLFPRPWSPHTGTV--------------DGGQFYKAIEYFRLLGRVMAKALQDGRLLDLPLSMAFYKLVLGQELD------LYDILSFDTELGKTLQELQALVSRKQYIESIKDQN--------------LDESYDMHFRGTPVEDLCLDFTLPGYPEYIL--------KAG----------DENVDLSNLEEYISLVVDATVKTGIRQQMEAFRSGFNQVFDFSALQIFSPSELDYLLCG-RRELWK-PETLVDHIKFDHGFTSKSPPIIHLLEIMGEFTPEQQRAFCQFVTGAPRLPAGGLASLNPKLTIVRK----HSSSAGNAAQNSNAPSESADEDLPSVMTCANYLKLPPYSTKEIMSKKLLYAINEGQGSFDLS 1846
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|565403053|ref|XP_006366981.1| (PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Solanum tuberosum]) HSP 1 Score: 280.026 bits (715), Expect = 7.877e-78 Identity = 194/604 (32.12%), Postives = 298/604 (49.34%), Query Frame = 0
Query: 44 VSSGGVR--EECWVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRG-----------ESHHD---------------GLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQK-LRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAG---------VDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
+S+ G++ E +V L+ ++A+++QD +AL + LP WC QL + PFL F R++YF+ ++FGL RA++RL QQ+QG DG +G +H+ R +Q+ KV+VSR ++L SA KV+E + S++ +LE E+F E GTG GPT EF++L+S +++ LG+WR E H D GL+P+PWS TG +GG+ K + F LGR++ ++L D RLLD+ + + G++ L ++ DS L + LQ L A Q+ E+ ++Q + +R V LCL F LPG PE L K G E+V NL Y+ V+ ++ +R Q+ A +G + AL +F+ E+ ++ G E+ K PE +++ + DHG+T S + L+EI+ E T E++R F FVTG+P LP GGL P+LT+V+K H+ + G A D LPS TC NYLKLP YS++ +M ++LL ++ GQ SF LS
Sbjct: 1329 LSTTGIKIPSEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRL--QQQQGADG-------------------NGSTHE-----------RAVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLISHDLQELGLGMWRSGLSLTSNEHSMEVHIDNKLSRSDRDLVQAPLGLFPRPWSPHTGTV--------------DGGQFCKAIEYFRLLGRVMAKSLQDGRLLDLPLSMAFYKLVLGQELD------LYDILSFDSELGKTLQELQALVSRKQYIESI--------KDQNLDKSYDMRFRGTP---VEDLCLDFTLPGYPEYVL--------KAG----------DENVDLSNLEEYISLVVDATVKTGIRQQMEAFRSGFNQVFDFSALQIFSPSELDYLLCG-RRELWK-PETLVDHIKFDHGFTSKSPPIIHLLEIMGEFTPEQQRAFCQFVTGAPRLPAGGLAALNPKLTIVRK----HSSSAGNAAHSSNAPSESADEDLPSVMTCANYLKLPPYSTKEIMSKKLLYAINEGQGSFDLS 1845
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|922855106|gb|KOO23585.1| (e3 ubiquitin-protein ligase upl3 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 267.7 bits (683), Expect = 2.872e-77 Identity = 202/583 (34.65%), Postives = 277/583 (47.51%), Query Frame = 0
Query: 54 WVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHD--------------------------GLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQKLRQFACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADAD-ERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQNLGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAGVDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
+V + L+ ++ ++L DP+AL + LP WC L P L F R+ ++FGL RA+ RL QQ Q EG AS S +G+ + R P KV++SR +++ SA KV++ + +++ LE E+F E GTG GPT EF++LVS+E+R L LW ES GLYP+P + GS G + L+ F +G+ + +A+LD RL+D+ F L G P +L ++ V+ +LA QLQ L LA QR+ P ++ D V L L LPG PEI L DGG DVT N+G YVQRVL V L EAV Q+ A G + P L F E+ ++ GS+ + I+E L DHGYTR S+A+ +L+EIL EM+ E FL FVTGSP LPVGGL PRLT+V+K E DA LPS TC NY+KLPDYSS+ VM++RL ++ GQ +F+LS
Sbjct: 152 FVNRKLNAKLQRQLADPLALCARALPSWCASLASGCPELFAFEARRLLLQSTAFGLSRALQRL-QQHSQ-------------EGAAAPNDASA--SERGAEL-----RLGRLPRQ-----KVRISRSRVVDSALKVIDLYAAQKASLEVEYFGEAGTGLGPTLEFYTLVSRELRRSELRLWVDESASAASAKEVSDMDKIKTGDEEASYVYAACGLYPRPIAQGADGS---------------GVPARTLQLFGFMGKFVAKAMLDNRLVDLPFCQTFYKQLLGE------PLSLADLAEVNPSLASQLQKL---QRLAH--------QRTALLRGGAKPSDASVKALKLDGVEVGDLGLDLTLPGAPEIELC---------------PDGG-ARDVTLDNVGEYVQRVLDVYLVEAVLAQIKAFREGFSAVFPIEHLSAFAPSELDCVLN--GSKEAWEVSTIVEYLKFDHGYTRASKAIGFLLEILCEMSPGEVATFLKFVTGSPRLPVGGLARLNPRLTIVQKRPEDGISP------DAYLPSVMTCANYVKLPDYSSKVVMKQRLFTAINEGQGAFYLS 652
BLAST of EWM23921.1 vs. NCBI_GenBank
Match: gi|674943234|emb|CDX90283.1| (BnaA08g17010D [Brassica napus]) HSP 1 Score: 271.937 bits (694), Expect = 3.008e-77 Identity = 185/600 (30.83%), Postives = 285/600 (47.50%), Query Frame = 0
Query: 44 VSSGGVREECWVIKPLSERMAQELQDPVALATQQLPGWCDQLLRYGPFLLQFRVRKEYFHLSSFGLGRAVHRLLQQQRQGMDGQGGGGGGGGEGGGTGRHASHGHSHQGSHHHHHHHQYRRAPTSAVQQLKVQVSRRKLLASAEKVLEEHGSRRVLLETEFFNEPGTGSGPTAEFFSLVSKEMRSPNLGLWRGESHHD----------------------------GLYPQPWSDPTGGSEERMKDQKGGGGRPEGGRGQKLRQ-FACLGRLIGQALLDERLLDIRFAAPLVATLAGRQASQSLPAALEEMERVDSALARQLQALAASTGLAQWFEAPESGQRSERQEQEVGPGKIVRESADADERVSALCLTFCLPGEPEIGLLGPSGVPVKPGVEGLRSDGGLGEDVTRQN-LGLYVQRVLQVGLREAVRPQVTAMLTGLQDIVPTGALWVFTEEEIMAMVGGVGSEMGKDPEEILEALACDHGYTRGSQAVRWLVEILAEMTLEEERHFLMFVTGSPGLPVGGLMGCCPRLTVVKKVAEGHARALGQAG----VDAMLPSASTCTNYLKLPDYSSRAVMRERLLLSLRHGQHSFHLS 609
++ V E ++ L+ ++A+++QD +AL + LP WC QL PFL F+ R++YF+ ++FGL RA++RL QQ+QG DG G R +Q+ KV+VSR ++L SA KV+E + S++ +LE E+F E GTG GPT EF++L+S +++ +LG+WR S GL+P+PW S EG R K+ + F LGR++ +AL D RL+D+ + + G++ L ++ D+ L + LQ L G + EA S G + + R+ LCL F LPG PE +L P G+D+ N L Y+ V+ ++ V Q+ A +G + +L +FT E+ ++ G + E ++E + DHGYT S A+ +L+EI+ E+T +++R F FVTG+P LP GGL PRLT+V+K++ A G D LPS TC NYLKLP YS++ +M ++LL ++ GQ SF LS
Sbjct: 337 TTAAKVSHEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTTACPFLFPFQTRRQYFYSTAFGLSRALNRL--QQQQGADGSGS------------------------------TNEREMRIGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVSLGMWRSNSGDKLSMQTDRDEIQDGKSAAARDRDIVQAPLGLFPRPWPSTADVS--------------EGSRFHKVVEYFRLLGRVMAKALQDGRLMDVPLSTAFYKLILGQELD------LHDVILFDAELGKTLQELRVLVGRKHYLEAGGGDNSS-------GISDLCLRGS----RIEDLCLDFTLPGYPEY-ILRP------------------GDDIVDINSLEDYISLVVDATVKRGVARQIEAFRSGFNQVFDIKSLQIFTPSELDYLL--CGRRELWEAETLVEHIKFDHGYTAKSPAIIFLLEIMGELTADQQRAFCQFVTGAPRLPPGGLAVLNPRLTIVRKLSSTSNAAANGTGASETADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS 852 The following BLAST results are available for this feature:
BLAST of EWM23921.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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