EWM23927.1, cds6756 (CDS) Nannochloropsis gaditana

Overview
NameEWM23927.1
Unique Namecds6756
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:464686..466140 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23927.1
Producttransmembrane protein
Orig transcript idgnl|cribi|Naga_100082g2.9359.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:464686..466140 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR005178Ostalpha/TMEM184C
Homology
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|585105212|gb|EWM23927.1| (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 993.416 bits (2567), Expect = 0.000e+0
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0
Query:    1 MGGLHHAVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYVGAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLAQSIDRRGEIGLAGGWETGDGNRSCPSQPALHKEVTEFSSRPGQRRSRQSSSQDLGADFANGSKGGATGEELESAPARKLGVFYGFEALGPHRDLNSGSYSIPGSSSATTLSSPKNNPRAPADAGVGGGKHESFGGEGPCLPEEDRPMLSKGEALALNTFPWRLNG 484
            MGGLHHAVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYVGAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLAQSIDRRGEIGLAGGWETGDGNRSCPSQPALHKEVTEFSSRPGQRRSRQSSSQDLGADFANGSKGGATGEELESAPARKLGVFYGFEALGPHRDLNSGSYSIPGSSSATTLSSPKNNPRAPADAGVGGGKHESFGGEGPCLPEEDRPMLSKGEALALNTFPWRLNG
Sbjct:    1 MGGLHHAVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYVGAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLAQSIDRRGEIGLAGGWETGDGNRSCPSQPALHKEVTEFSSRPGQRRSRQSSSQDLGADFANGSKGGATGEELESAPARKLGVFYGFEALGPHRDLNSGSYSIPGSSSATTLSSPKNNPRAPADAGVGGGKHESFGGEGPCLPEEDRPMLSKGEALALNTFPWRLNG 484          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|635362152|emb|CCI49046.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 347.051 bits (889), Expect = 1.632e-112
Identity = 162/317 (51.10%), Postives = 218/317 (68.77%), Query Frame = 0
Query:    4 LHHAVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYV---GAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPG 317
            +  +V  + G+C   ++++S  LI+ HL +F+KP +QSKIVGILWMVPIY+  SWLSL FK  ALYLD+ RDCYEAYV+YLFLAL++AYLGDG  ERV+ ++   P VKH  P K C     +    +FLR CK  TMQ++++KP   L A+IL     Y +G F L++ +IY +  +N+SV YAFY L LFY  L  PL  +NPVPK LCIKAV+FLSFWQ VV+A L R  ++   G W+ +NV   +Q +LIC EM LVA AH  AFP  +++   G+P +RT  L+DH +  +A+RDFNEVMP++LP++F PG
Sbjct:   18 VQRSVWVVAGLCVAASIIISVRLIRSHLRNFTKPAIQSKIVGILWMVPIYATDSWLSLRFKNIALYLDLMRDCYEAYVVYLFLALMIAYLGDGSHERVLQIIHPLPSVKHFWPVKYCKKPEMM--APEFLRDCKIATMQFVIMKPLMALFAIILQVNDAYDQGQFRLDKGYIYVSFFINLSVTYAFYYLVLFYYALEIPLRPYNPVPKLLCIKAVIFLSFWQSVVLAFLSRFRIIHELGSWSVENVTTGIQNLLICFEMTLVAIAHTRAFPYQDFIPEHGSPTLRTSFLADHLAFESAMRDFNEVMPIVLPTSFKPG 332          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|673024778|ref|XP_008866350.1| (hypothetical protein H310_04014 [Aphanomyces invadans] >gi|574477916|gb|ETW04912.1| hypothetical protein H310_04014 [Aphanomyces invadans])

HSP 1 Score: 345.125 bits (884), Expect = 8.944e-112
Identity = 170/329 (51.67%), Postives = 222/329 (67.48%), Query Frame = 0
Query:    8 VVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEY---------VGAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLAQSIDRRGE 327
            V  I+G     A++ S  LI+ HL +F+KPLVQ KI+GILWMVPIY+  SWLSL FK ++L+LDMFRDCYEAYV+YLFLAL+VAYLGDG ++RVV +L+  P + H  PF  C     +  G  FLR CK   MQ++VLKP   L A+IL    +YG+G F LNR ++Y +LI+N SV YAFY L LFY+ L   L+ +NPVPKFLC+KAVLFLS+WQ VV+A L R  ++   G WTT +V   +Q VLIC EMM++A  H YAFP   +         + + ++R  +LS++F+   ALRDFNEVMP++LPS F P    S  RR +
Sbjct:   36 VWVISGTFVLTALITSVKLIRNHLVYFTKPLVQRKIIGILWMVPIYATTSWLSLRFKDWSLFLDMFRDCYEAYVIYLFLALMVAYLGDGSDDRVVRILRTLPDLPHPFPFNYC--NQPIKMGKRFLRDCKMAAMQFVVLKPLTGLLAIILEKFDMYGQGHFVLNRGYLYLSLIINASVTYAFYYLVLFYLALGTHLKPYNPVPKFLCVKAVLFLSYWQSVVLAFLSRFEIIHQLGSWTTDDVTNGIQNVLICFEMMVIAVVHTYAFPFESFKNDDVFSDALDSGSLRDSILSENFAFDDALRDFNEVMPIVLPSGFKPS---SNSRRSD 359          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|325192210|emb|CCA26661.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 345.125 bits (884), Expect = 1.029e-111
Identity = 183/403 (45.41%), Postives = 243/403 (60.30%), Query Frame = 0
Query:    2 GGLHHAVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPH--GADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYV---GAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLAQSIDRRGEIGLAGGWETGDGNRSCPSQPALHKEVTEFSSRPGQRRSRQSSSQDLGADFANGSKGGATGEELESAPARKLG 399
              +  +V  I G+C   ++++S  LI+ HL +F+KP  QSKIVGILWMVPIY+  SWLSL FK  A+YLD+ RDCYEAYV+YLFLAL++AYLGDG  ERV+ +LQ  P VKH  P    +   + P     +FLR CK  TMQ++V+KP   L A+IL     Y +G F L++ +IY + ++N+SV YAFY L LFY  L  PL  +NPV K LCIKAV+FLSFWQ VV+A L R  ++   G W+ +NV   +Q +LIC EM LVA AH  AFP  ++V   G+P MRT  L+DH +  +A++DFNEVMP++LP++F PG        G     G     D +   P    +      F S P   R      + LG+D    S   ATG+E   A  R+ G
Sbjct:   26 ARVQRSVWVIAGLCVATSIIVSVRLIRAHLRNFTKPATQSKIVGILWMVPIYATDSWLSLRFKNIAVYLDLMRDCYEAYVIYLFLALMIAYLGDGNHERVLQILQSLPSVKHFWP----VNNWKKPELMAPEFLRDCKIATMQFVVMKPLMALIAIILQVNDAYDQGQFRLDKGYIYVSFLINLSVTYAFYYLVLFYYALEIPLRPYNPVLKLLCIKAVIFLSFWQSVVLAFLSRFRIIHELGSWSVENVTTGIQNLLICFEMTLVAIAHTRAFPYEDFVPEHGSPTMRTSFLADHLAFESAMQDFNEVMPIVLPTSFKPG--------GSSIYKGAQNLRDWSTHWPRNHDV------FESEPLCDR------KHLGSD---KSIRYATGQEKLDAKTRQRG 401          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|299471056|emb|CBN78916.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 336.65 bits (862), Expect = 1.195e-109
Identity = 164/300 (54.67%), Postives = 215/300 (71.67%), Query Frame = 0
Query:    7 AVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYVGAPAMRTG--LLSDHFSHTTALRDFNE 304
             V+ + G+ +  AV LS+ LI++HL HFS+P+VQ KI+GILWMVPIY++ S++SL FK  A Y+DM RDCYE Y LYLFLAL+V YLGDG+E +VV +L+  P  KH  PF L + G  +PHG DFLRF KFGT+QY  +KP     A++LA  GL+ EG F++   W+Y + ++N+SV YAFYCLG+FY +L  PL+  +PVPKFLCIKAVLFLSFWQG+VIA LV+L L+   G WTT NV   +Q++L+CVEM+++A AH  AF    Y      R G  LL  HF+H +A+RDFNE
Sbjct:    8 VVLIVAGLSSAFAVGLSSLLIRRHLIHFSRPVVQGKIIGILWMVPIYAIDSFVSLRFKNTAPYVDMLRDCYEGYALYLFLALMVGYLGDGDEYKVVDILEQCPSSKHAWPFGLVMKG-PMPHGRDFLRFAKFGTLQYSCVKPLAAFVALVLAPFGLFQEGDFSIYGGWLYISFVVNLSVCYAFYCLGMFYYVLKTPLKPFDPVPKFLCIKAVLFLSFWQGIVIAGLVKLNLIHEMGGWTTNNVEKGIQDLLVCVEMLVIAIAHTRAFSCKPYEDGAPRRDGASLLEAHFAHHSAIRDFNE 306          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|1173932891|gb|OQR84782.1| (hypothetical protein ACHHYP_12817 [Achlya hypogyna])

HSP 1 Score: 337.035 bits (863), Expect = 1.293e-108
Identity = 166/324 (51.23%), Postives = 221/324 (68.21%), Query Frame = 0
Query:   11 ITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYVGAPA-------MRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLAQSIDRRGE 327
            ++G+   +A+  S  LI+ HL HF+KPL+Q KI+GILWMVPIY+  SWLSL F+ YAL  DM RDCYEAYV+YLFLAL+VAYLGDG +ERV+A+L+  P + H  PF LC     +  G  FLR CK   MQ++VLKP  T  A++L   G+Y EG F +++ ++Y +L++N SV YAFY L LFY+ L   L  +NPVPKFLC+KAVLFLS+WQ VV+A L R  ++   G WTT +V+  +Q VLIC EM ++A  H YAFP   Y+ A +       +R  LLS++F+   ALRDFNEVMP++LPS F P  + ++ R  E
Sbjct:   49 VSGLFVLIAIGTSMRLIRNHLHHFTKPLIQRKIIGILWMVPIYATDSWLSLRFRSYALIFDMLRDCYEAYVIYLFLALMVAYLGDGSDERVIAILRTLPDLPHPFPFNLCYK--PIKMGKKFLRDCKMAAMQFVVLKPLTTFVAIVLEHYGMYDEGHFTIHKGYLYLSLVLNGSVTYAFYYLVLFYLALGVHLRPYNPVPKFLCVKAVLFLSYWQSVVLAFLSRFEIIHEIGSWTTDDVSTGIQNVLICFEMCIIAIVHNYAFPYEGYIAADSESSSASLLRNSLLSENFAIDDALRDFNEVMPIVLPSTFKP--SANVQRAAE 368          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|698780815|ref|XP_009823451.1| (hypothetical protein H257_01777 [Aphanomyces astaci] >gi|574121175|gb|ETV86652.1| hypothetical protein H257_01777 [Aphanomyces astaci])

HSP 1 Score: 336.65 bits (862), Expect = 2.348e-108
Identity = 169/330 (51.21%), Postives = 218/330 (66.06%), Query Frame = 0
Query:    8 VVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYVGAPAM----------RTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLAQSIDRRGE 327
            V  I+G     A+++S  LI+ HL +F+KPLVQ KI+GILWMVPIY+  SWLSL FK ++L+LDM RDCYEAYV+YLFLAL+VAYLGDG ++RVV +L+  P + H  PF  C     +  G  FLR CK   MQ++VLKP    AA++L    LYG+G F +NR ++Y +LI+N SV YAFY L LFY+ L   L+  NPVPKFLC+KAVLFLS+WQ VV+A L R  ++   G WTT +V   +Q VLIC EMM++A  H YAFP   +     M          R  +LS++F+   ALRDFNEVMP++LPS F P    S  RR +
Sbjct:   37 VWVISGTFVLTALVISVKLIRNHLVYFAKPLVQRKIIGILWMVPIYATTSWLSLRFKGWSLFLDMLRDCYEAYVIYLFLALMVAYLGDGSDDRVVRILRTLPDLPHPFPFNYC--NPPIKMGKRFLRDCKMAAMQFVVLKPLTGFAAILLERFDLYGQGHFVVNRGYLYLSLIINASVTYAFYYLVLFYLALGTHLKPFNPVPKFLCVKAVLFLSYWQSVVLAFLSRFAIIHELGTWTTDDVTNGIQNVLICFEMMVIAVVHTYAFPFEAFKDDDMMFANAMDGGTLRDSILSENFAFDDALRDFNEVMPIVLPSGFKPS---SNSRRTD 361          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|695414281|ref|XP_009526261.1| (hypothetical protein PHYSODRAFT_300357 [Phytophthora sojae] >gi|348677386|gb|EGZ17203.1| hypothetical protein PHYSODRAFT_300357 [Phytophthora sojae])

HSP 1 Score: 336.265 bits (861), Expect = 2.789e-108
Identity = 165/319 (51.72%), Postives = 215/319 (67.40%), Query Frame = 0
Query:    2 GGLHHAVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYV-GAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLA 319
              +   V A+ G+    +V+ SA LI+ HL HF+KP+VQSKIVGILWMVPIY+  SWLSL FK  ALYLD+ RD YE YV+YLFLAL++AYLG G  ERV+  ++  P ++H  PF        +  G  FLR CK  TMQ++V+KP     A++L   GLY +G+F+  + ++Y +L++N S+ YAFY L LFY+ L   L  +NPVPKFLCIKAVLFLSFWQ VV+A L R  ++   G W+ +NV   +Q +LIC EM  VA AH  AFP   YV G PA+RT +L+DH +   A+RDFNEVMPV+LP+ F PG A
Sbjct:   22 ADVQRLVWAVAGVFVAASVVSSALLIRGHLNHFTKPIVQSKIVGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSNERVLTTMRGLPDLEHPWPFNRWFQ--PIQMGPGFLRDCKMATMQFVVVKPMMAFVAIVLRVNGLYDQGNFSAKKGYLYTSLMVNASITYAFYYLVLFYLALSRQLAPYNPVPKFLCIKAVLFLSFWQSVVLAFLSRFQIIHELGSWSVENVTTGIQNLLICFEMFFVALAHHRAFPYKPYVHGNPALRTSILADHLAFEDAMRDFNEVMPVVLPTAFKPGAA 338          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|675168503|ref|XP_008893136.1| (hypothetical protein PPTG_01558 [Phytophthora parasitica INRA-310] >gi|568106705|gb|ETN21335.1| hypothetical protein PPTG_01558 [Phytophthora parasitica INRA-310])

HSP 1 Score: 332.798 bits (852), Expect = 7.024e-107
Identity = 164/319 (51.41%), Postives = 215/319 (67.40%), Query Frame = 0
Query:    2 GGLHHAVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYV-GAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLA 319
              +   V A+ G     +V+ SA LI+ HL HF++P+VQSKIVGILWMVPIY+  SWLSL FK  ALYLD+ RD YE YV+YLFLAL++AYLG G  ERV+ +++  P ++H  PF        +  G  FLR CK  TMQ++V+KP    AA+IL   G+Y +G+F+  + ++Y +L++N S+ YAFY L LFY+ L   L  +NPVPKFLCIKAVLFLSFWQ VV+A L R  ++   G W+ +NV   +Q +LIC EM  VA AH  AFP   YV G  A+RT +L+DH +   A+RDFNEVMPV+LP+ F PG A
Sbjct:   23 ADVQRLVWAVAGAFVAASVVSSALLIRGHLNHFTQPIVQSKIVGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSNERVLTMMRGLPDLEHPWPFNRWFK--PIQMGPGFLRDCKMATMQFVVIKPMMAFAAIILRLNGMYDQGNFSAKKGYLYTSLVVNASITYAFYYLVLFYLALSTQLAPYNPVPKFLCIKAVLFLSFWQSVVLAFLSRFQIIHELGSWSVENVTTGIQNLLICFEMFFVALAHHQAFPYKPYVHGNRALRTNILADHLAFEDAMRDFNEVMPVVLPTAFKPGAA 339          
BLAST of EWM23927.1 vs. NCBI_GenBank
Match: gi|566022436|gb|ETI45347.1| (hypothetical protein F443_10075 [Phytophthora parasitica P1569] >gi|568048073|gb|ETM45140.1| hypothetical protein L914_09745 [Phytophthora parasitica])

HSP 1 Score: 332.798 bits (852), Expect = 7.024e-107
Identity = 164/319 (51.41%), Postives = 215/319 (67.40%), Query Frame = 0
Query:    2 GGLHHAVVAITGICAGMAVLLSAALIQQHLTHFSKPLVQSKIVGILWMVPIYSVQSWLSLSFKRYALYLDMFRDCYEAYVLYLFLALLVAYLGDGEEERVVALLQHQPRVKHIMPFKLCLGGGEVPHGADFLRFCKFGTMQYIVLKPACTLAAVILAACGLYGEGSFALNRFWIYQTLIMNVSVGYAFYCLGLFYVLLHGPLEAHNPVPKFLCIKAVLFLSFWQGVVIAALVRLGLLPHFGEWTTQNVAMAVQEVLICVEMMLVAFAHQYAFPVAEYV-GAPAMRTGLLSDHFSHTTALRDFNEVMPVLLPSNFTPGLA 319
              +   V A+ G     +V+ SA LI+ HL HF++P+VQSKIVGILWMVPIY+  SWLSL FK  ALYLD+ RD YE YV+YLFLAL++AYLG G  ERV+ +++  P ++H  PF        +  G  FLR CK  TMQ++V+KP    AA+IL   G+Y +G+F+  + ++Y +L++N S+ YAFY L LFY+ L   L  +NPVPKFLCIKAVLFLSFWQ VV+A L R  ++   G W+ +NV   +Q +LIC EM  VA AH  AFP   YV G  A+RT +L+DH +   A+RDFNEVMPV+LP+ F PG A
Sbjct:   23 ADVQRLVWAVAGAFVAASVVSSALLIRGHLNHFTQPIVQSKIVGILWMVPIYATDSWLSLRFKDAALYLDLMRDSYEGYVIYLFLALMIAYLGGGSNERVLTMMRGLPDLEHPWPFNRWFK--PIQMGPGFLRDCKMATMQFVVVKPMMAFAAIILRLNGMYDQGNFSAKKGYLYTSLVVNASITYAFYYLVLFYLALSTQLAPYNPVPKFLCIKAVLFLSFWQSVVLAFLSRFQIIHELGSWSVENVTTGIQNLLICFEMFFVALAHHQAFPYKPYVHGNRALRTNILADHLAFEDAMRDFNEVMPVVLPTAFKPGAA 339          
The following BLAST results are available for this feature:
BLAST of EWM23927.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105212|gb|EWM23927.1|0.000e+0100.00transmembrane protein [Nannochloropsis gaditana][more]
gi|635362152|emb|CCI49046.1|1.632e-11251.10unnamed protein product [Albugo candida][more]
gi|673024778|ref|XP_008866350.1|8.944e-11251.67hypothetical protein H310_04014 [Aphanomyces invad... [more]
gi|325192210|emb|CCA26661.1|1.029e-11145.41conserved hypothetical protein [Albugo laibachii N... [more]
gi|299471056|emb|CBN78916.1|1.195e-10954.67conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173932891|gb|OQR84782.1|1.293e-10851.23hypothetical protein ACHHYP_12817 [Achlya hypogyna... [more]
gi|698780815|ref|XP_009823451.1|2.348e-10851.21hypothetical protein H257_01777 [Aphanomyces astac... [more]
gi|695414281|ref|XP_009526261.1|2.789e-10851.72hypothetical protein PHYSODRAFT_300357 [Phytophtho... [more]
gi|675168503|ref|XP_008893136.1|7.024e-10751.41hypothetical protein PPTG_01558 [Phytophthora para... [more]
gi|566022436|gb|ETI45347.1|7.024e-10751.41hypothetical protein F443_10075 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6772rna6772Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications