EWM23933.1, cds6743 (CDS) Nannochloropsis gaditana

Overview
NameEWM23933.1
Unique Namecds6743
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:436861..437426 +
Alignment locationCM002469.1:437570..438797 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23933.1
Productd-lactate dehydrogenase
Orig transcript idgnl|cribi|Naga_100082g16.9365.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:436861..437426 +
CM002469.1supercontigCM002469.1:437570..438797 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
GO:0008762UDP-N-acetylmuramate dehydrogenase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR016164FAD-linked_Oxase-like_C
IPR016166FAD-bd_2
IPR016167FAD-bd_2_sub1
IPR004113FAD-linked_oxidase_C
IPR016171Vanillyl_alc_oxidase_C-sub2
IPR006094Oxid_FAD_bind_N
IPR016169CO_DH_flavot_FAD-bd_sub2
Homology
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|585105218|gb|EWM23933.1| (d-lactate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 1226.85 bits (3173), Expect = 0.000e+0
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0
Query:    1 MRGWMRIGRRDAASIWTLYASGCCRRLTSSHGSRFMSFTEKKGPQGWTGTGTLCRCESHRSRQLRHPASSILLSHGHCILAIAAGLAVVAQNGGVSNESRGRDTLCEASLEASPEQQSRDAGVNQGDLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLPQSLVPAQEYFR 597
            MRGWMRIGRRDAASIWTLYASGCCRRLTSSHGSRFMSFTEKKGPQGWTGTGTLCRCESHRSRQLRHPASSILLSHGHCILAIAAGLAVVAQNGGVSNESRGRDTLCEASLEASPEQQSRDAGVNQGDLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLPQSLVPAQEYFR
Sbjct:    1 MRGWMRIGRRDAASIWTLYASGCCRRLTSSHGSRFMSFTEKKGPQGWTGTGTLCRCESHRSRQLRHPASSILLSHGHCILAIAAGLAVVAQNGGVSNESRGRDTLCEASLEASPEQQSRDAGVNQGDLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLPQSLVPAQEYFR 597          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|657989871|ref|XP_008387152.1| (PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial isoform X1 [Malus domestica])

HSP 1 Score: 520.776 bits (1340), Expect = 1.323e-176
Identity = 255/504 (50.60%), Postives = 353/504 (70.04%), Query Frame = 0
Query:   86 LAVVAQNGGVSNESRGRDTLCEASLEASPEQQSRDAGVNQG---DLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
            +A+    G ++   +   +LCEA     P   SR+  V +G   ++P + +  L+D+   + ++ D EER  HGKP SS+H+   IPD++V P S EQVS+I+R C  +++P+VPYGGATSLEGHTL+P+ G+ +DM+ MN +  + IED+D  VE G+G+++LNE L   G  FPLDPGPGA+IGGMCA RCSGS AV+YGTMRD+V+S+  VLA+G ++KT SRARKSAAGYDLTRL+IGSEGTLG++TEVTLRL++ P+ S      FPS ++AA  A AT+ +G++V R EL+D+  VR +N  NG    E  TL++E +G      E Q  +V+ +  +H G   + ++D     ++W+ RKEALWA  A  P+ E MITDVCVPLS L +LI +SK+++ AS L   ++AHAGDGNFH FI+F P+  E   EA+ LS FMV +AL+++GTCTGEHG+G GK+KYLE+E G  AL+TM  IK ALDP N++NPGK++P
Sbjct:   56 VALAVSAGSLALRPQSDPSLCEA-----PNSNSRNEFVVKGLRKEVPQELIDELKDVCQ-DNMTMDYEERDNHGKPQSSFHRAVNIPDIVVFPRSEEQVSKIVRSCDKHKVPIVPYGGATSLEGHTLSPNGGVCIDMSLMNHVKALHIEDMDVVVEPGIGWMELNEYLAPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLVIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPSFKDAADVAIATMLSGIQVSRVELLDEVQVRAINIANGKNFPETPTLMFEFIGTEAYSHE-QTHIVQQIVSEHNGSDFVFAEDPEAKKELWKIRKEALWACFAMEPNFEAMITDVCVPLSCLAELISRSKEQLDASELVCTVIAHAGDGNFHTFILFDPNNEEHRREAERLSHFMVHAALSMEGTCTGEHGVGTGKMKYLEQELGMEALKTMKRIKAALDPNNIMNPGKLIP 552          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|727639858|ref|XP_010491229.1| (PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial-like [Camelina sativa])

HSP 1 Score: 519.62 bits (1337), Expect = 5.013e-176
Identity = 245/460 (53.26%), Postives = 336/460 (73.04%), Query Frame = 0
Query:  127 DLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
            ++P + +  L+ I+  + ++ D +ER  HGKP +S+HK   IPDV+V P S E+VS+I++ C  Y++P+VPYGGATS+EGHTLAP  G+ +DM+ M R+  + +ED+D  VE G+G+L+LNE L + G  FPLDPGPGASIGGMCA RCSGS AV+YGTMRD+V+S+  VL +G V+KT SRARKSAAGYDLTRL+IGSEGTLG++TEVTLRL++ P+ S      FP+V++AA  A AT+ +G++V R EL+D+  +R +N  NG    EA TL++E +G ++     Q  +V+ +A KH G   + +++     ++W+ RKEALWA  A  P  E MITDVCVPLS L +LI +SK ++ ASSL   ++AHAGDGNFH  I+F P   E+ +EA+ L+ FMV SAL++DGTCTGEHG+G GK+KYLEKE G  ALQTM  IK+ LDP +++NPGK++P
Sbjct:  101 EVPKELITQLKTIL-EDNLTTDYDERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKRVKALHVEDMDVVVEPGIGWLELNEYLEEYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQHSVVAVCNFPTVKDAADVAIATMMSGIQVSRVELLDEVQIRAINMANGKSLNEAPTLMFEFIG-TEAYTREQTEIVQQIASKHNGSDFMFAEEPEAKKELWKIRKEALWACYAMAPGHEAMITDVCVPLSHLAELISRSKKELDASSLLCTVIAHAGDGNFHTCIMFDPSNEEQRKEAERLNHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTMKRIKKTLDPNDIMNPGKLIP 558          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|565458648|ref|XP_006287323.1| (hypothetical protein CARUB_v10000524mg, partial [Capsella rubella] >gi|482556029|gb|EOA20221.1| hypothetical protein CARUB_v10000524mg, partial [Capsella rubella])

HSP 1 Score: 520.39 bits (1339), Expect = 6.661e-176
Identity = 245/460 (53.26%), Postives = 336/460 (73.04%), Query Frame = 0
Query:  127 DLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
            ++P + +  L+ I+  + ++ D +ER  HGKP +S+HK   IPDV+V P S E+VS+I++ C  Y++P+VPYGGATS+EGHTLAP  G+ +DM+ M  +  + +ED+D  VE G+G+L+LNE L + G  FPLDPGPGASIGGMCA RCSGS AV+YGTMRD+V+S+  VL +G V+KT SRARKSAAGYDLTRL+IGSEGTLG++TEVTLRL++ P+ S      FP+V++AA  A AT+ +G++V R EL+D+  +R +N  NG    EA TL++E +G ++     Q  +V+ +A KH G   + +++     ++W+ RKEALW+  A  P  E MITDVCVPLS L +LI +SK +I ASSL   ++AHAGDGNFHA I+F P + E+  EA+ L+ FMV SAL++DGTCTGEHG+G GK+KYLEKE G  ALQTM  IK+ LDP +++NPGK++P
Sbjct:  135 EVPKELITQLKTILQ-DNLTTDYDERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNEYLEEYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQHSVVAVCNFPTVKDAADVAIATMMSGIQVSRVELLDEVQIRAINMANGKNLNEAPTLMFEFIG-TEAYTREQTQIVQQIASKHNGSDFMFAEEPEAKKELWKIRKEALWSCYAMAPGHEAMITDVCVPLSHLAELISKSKKEIEASSLLCTVIAHAGDGNFHACIMFDPSKEEQRREAERLNHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTMKKIKKTLDPNDIMNPGKLIP 592          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|1190996512|ref|XP_020878860.1| (D-lactate dehydrogenase [cytochrome], mitochondrial [Arabidopsis lyrata subsp. lyrata] >gi|297319105|gb|EFH49527.1| FAD linked oxidase family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 518.85 bits (1335), Expect = 1.136e-175
Identity = 244/460 (53.04%), Postives = 336/460 (73.04%), Query Frame = 0
Query:  127 DLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
            ++P + +  L+ I+  + ++ D +ER  HGKP +S+HK   IPDV+V P S E+VS+I++ C  Y++P+VPYGGATS+EGHTLAP  G+ +DM+ M R+  + +ED+D  VE G+G+L+LNE L + G  FPLDPGPGASIGGMCA RCSGS AV+YGTMRD+V+S+  VL +G V+KT SRARKSAAGYDLTRL+IGSEGTLG++TE+TLRL++ P+ S      FP+V++AA  A AT+ +G++V R EL+D+  +R +N  NG   TEA TL++E +G ++     Q  +V+ +A KH G   + +++     ++W+ RKEALWA  A  P  E MITDVCVPLS L +LI +SK ++ ASSL   ++AHAGDGNFH  I+F P   ++  EA+ L+ FMV SAL++DGTCTGEHG+G GK+KYLEKE G  ALQTM  IK+ LDP +++NPGK++P
Sbjct:  104 EVPKELISQLKTIL-EDNLTTDHDERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKRVKALHVEDMDVVVEPGIGWLELNEYLEEYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLMIGSEGTLGVITEITLRLQKIPQHSVVAVCNFPTVKDAADVAIATMMSGIQVSRVELLDEVQIRAINMANGKNLTEAPTLMFEFIG-TEAYTREQTQIVQQIASKHNGSDFMFAEEPEAKKELWKIRKEALWACYAMAPGHEAMITDVCVPLSHLAELISRSKKELDASSLLCTVIAHAGDGNFHTCIMFDPSNEDQRREAERLNHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTMKRIKKTLDPNDIMNPGKLIP 561          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|18415252|ref|NP_568170.1| (FAD-linked oxidases family protein [Arabidopsis thaliana] >gi|75165032|sp|Q94AX4.1|DLD_ARATH RecName: Full=D-lactate dehydrogenase [cytochrome], mitochondrial; Short=AtD-LDH; AltName: Full=D-lactate ferricytochrome C oxidoreductase; AltName: Full=Glycolate deshydrogenase; Flags: Precursor >gi|15010680|gb|AAK73999.1| AT5g06580/F15M7_11 [Arabidopsis thaliana] >gi|332003654|gb|AED91037.1| FAD-linked oxidases family protein [Arabidopsis thaliana] >gi|1032278664|gb|OAO92992.1| hypothetical protein AXX17_AT5G06170 [Arabidopsis thaliana])

HSP 1 Score: 518.464 bits (1334), Expect = 1.295e-175
Identity = 245/459 (53.38%), Postives = 335/459 (72.98%), Query Frame = 0
Query:  128 LPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
            +P + +  L+ I+  + ++ D +ER  HGKP +S+HK   IPDV+V P S E+VS+I++ C  Y++P+VPYGGATS+EGHTLAP  G+ +DM+ M R+  + +ED+D  VE G+G+L+LNE L + G  FPLDPGPGASIGGMCA RCSGS AV+YGTMRD+V+S+  VL +G V+KT SRARKSAAGYDLTRL+IGSEGTLG++TE+TLRL++ P+ S      FP+V++AA  A AT+ +G++V R EL+D+  +R +N  NG   TEA TL++E +G ++     Q  +V+ +A KH G   + +++     ++W+ RKEALWA  A  P  E MITDVCVPLS L +LI +SK ++ ASSL   ++AHAGDGNFH  I+F P   E+  EA+ L+ FMV SAL++DGTCTGEHG+G GK+KYLEKE G  ALQTM  IK+ LDP +++NPGK++P
Sbjct:  106 VPKELISQLKTIL-EDNLTTDYDERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKRVKALHVEDMDVIVEPGIGWLELNEYLEEYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLIIGSEGTLGVITEITLRLQKIPQHSVVAVCNFPTVKDAADVAIATMMSGIQVSRVELLDEVQIRAINMANGKNLTEAPTLMFEFIG-TEAYTREQTQIVQQIASKHNGSDFMFAEEPEAKKELWKIRKEALWACYAMAPGHEAMITDVCVPLSHLAELISRSKKELDASSLLCTVIAHAGDGNFHTCIMFDPSSEEQRREAERLNHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTMKRIKKTLDPNDIMNPGKLIP 562          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|727560763|ref|XP_010452597.1| (PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial [Camelina sativa])

HSP 1 Score: 513.842 bits (1322), Expect = 8.384e-174
Identity = 242/460 (52.61%), Postives = 333/460 (72.39%), Query Frame = 0
Query:  127 DLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
            ++P + +  L+ I+  + ++ D +ER  HGKP +S+HK   IPDV+V P S E+VS+I++ C  Y++P+VPYGGATS+EGHTLAP  G+ +DM+ M R+  + +ED+D  VE G+G+L+LNE L + G  FPLDPGPGASIGGMCA RCSGS AV+YGTMRD+V+S+  VL +G V+ T SRARKSAAGYDLTRL+IGSEGTLG++TEVTLRL++ P+ S      FP+V++AA  A AT+ +G++V R EL+D+  +R +N  NG    EA TL++E +G ++     Q  +V+ +   H G   + +++     ++W+ RKEALWA  A  P  E MITDVCVPLS L +LI +SK ++ ASSL   ++AHAGDGNFH  I+F P   E+ +EA+ L+ FMV SAL++DGTCTGEHG+G GK+KYLEKE G  ALQTM  IK+ LDP +++NPGK++P
Sbjct:  102 EVPKELITQLKTIL-EDNLTTDYDERYFHGKPQNSFHKALNIPDVVVFPRSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKRVKALHVEDMDVVVEPGIGWLELNEYLEEYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVMTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQHSVVAVCNFPTVKDAADVAIATMMSGIQVSRVELLDEVQIRAINMANGKNLNEAPTLMFEFIG-TEAYTREQTEIVQQITSNHNGSDFMFAEEPEAKKELWKIRKEALWACYAMAPGHEAMITDVCVPLSHLAELISRSKKELDASSLLCTVIAHAGDGNFHTCIMFDPSNEEQRKEAERLNHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTMKRIKKTLDPNDIMNPGKLIP 559          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|1102692699|gb|OIV92264.1| (hypothetical protein TanjilG_00282 [Lupinus angustifolius])

HSP 1 Score: 513.457 bits (1321), Expect = 9.572e-174
Identity = 243/463 (52.48%), Postives = 337/463 (72.79%), Query Frame = 0
Query:  124 NQGDLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
            +Q + P + +  L+ I   + +S D +ER +HGKP +S+HK   IPDVIV P S E+VS+I++ C  +++P+VPYGGATS+EGHTL P+ G+ +DM+ M R+  + ++D+D  VE G+G+++LNE L   G  FPLDPGPGASIGGMCA RCSGS AV+YGTMRD+V+++ AVLA+G ++KT SRARKSAAGYDLTRL+IGSEGTLGI+TEVTLRL++ P+ S      FPSV+EAA  A AT+ +G++V R EL+D+  V+ +N  NG    E+ TL++E +G ++     Q  +V  +  +H G   + +++  +  ++W+ RKEALWA  A  PD E MITDVCVPLS L DLI +SK+++ AS L   ++AHAGDGNFH  I+F P + E+  EA+ L+ FMV +AL+L+GTCTGEHG+G GK+KYLE+E G  AL+TM  IK  LDP N++NPGK++P
Sbjct:   89 SQKEFPQELLNELKAICQ-DNISVDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKSCDNHKVPIVPYGGATSIEGHTLCPNGGVCIDMSLMKRVKALHVDDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVITLKAVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGIITEVTLRLQKIPQHSVVAMCNFPSVKEAADVAIATMMSGIQVSRVELLDEVQVKAINIANGKNYPESPTLMFEFIG-TEAYAREQTQIVRAIVSEHNGSDFVFAEEPEEKKELWKVRKEALWACFAMEPDLEAMITDVCVPLSHLADLISRSKNELDASPLVCTVIAHAGDGNFHTVILFDPTKEEQRREAERLNQFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKSVLDPNNIMNPGKLIP 549          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|567171062|ref|XP_006399130.1| (hypothetical protein EUTSA_v10013121mg [Eutrema salsugineum] >gi|557100220|gb|ESQ40583.1| hypothetical protein EUTSA_v10013121mg [Eutrema salsugineum])

HSP 1 Score: 512.686 bits (1319), Expect = 2.657e-173
Identity = 242/461 (52.49%), Postives = 333/461 (72.23%), Query Frame = 0
Query:  126 GDLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
             ++P + +  L+ I+  + ++ D +ER  HGKP +S+HK   IPDV+V P S EQVS+I++ C  Y++P+VPYGGATS+EGHTLAP  G+ +DM+ M  +  + +ED+D  VE G+G+L+LNE L   G  FPLDPGPGA+IGGMCA RCSGS AV+YGTMRD+V+S+  VL +G V+KT SRARKSAAGYDLTRL+IGSEGTLG++TEVTLRL++ P+ S      FP+V++AA  A AT+ +G++V R EL+D+  +R +N  NG +  E  TL++E +G ++     Q  +V+ +A KH G   + +++     ++W+ RKEALWA  A  P  E MITDVCVPLS L +LI +SK ++ AS L   ++AHAGDGNFH  I+F P   E+  EA+ L+ FMV SAL+++GTCTGEHG+G GK+KYLEKE G  ALQTM  IK+ALDP +++NPGK++P
Sbjct:  103 NEVPKELISELK-IILEDNLTTDYDERYFHGKPQNSFHKSVNIPDVVVFPRSEEQVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNEHLEQYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLIIGSEGTLGVITEVTLRLQKIPQHSVVAVCNFPTVKDAADVAIATMMSGIQVSRVELLDEVQIRALNMANGKKLNEVPTLMFEFIG-TEAYAREQTRIVQEIASKHNGSDFVFAEEPEAKKELWKIRKEALWACYAMAPGHEAMITDVCVPLSHLAELISRSKKELDASQLLCTVIAHAGDGNFHTCIMFDPTNEEQRREAERLNHFMVHSALSMNGTCTGEHGVGTGKMKYLEKELGIEALQTMKRIKKALDPNDIMNPGKLIP 561          
BLAST of EWM23933.1 vs. NCBI_GenBank
Match: gi|508717769|gb|EOY09666.1| (FAD-linked oxidases family protein isoform 1 [Theobroma cacao] >gi|508717770|gb|EOY09667.1| FAD-linked oxidases family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 513.072 bits (1320), Expect = 2.855e-173
Identity = 270/585 (46.15%), Postives = 382/585 (65.30%), Query Frame = 0
Query:   12 AASIWT--LYASGCCRRLTSSHGSRFMSFTEKKGPQGWTGTGTLCRCESHRSRQLRHPASSILLSHGHCILAIAAG-LAVVAQNGGVSNESRGRDTLCEA----SLEASPEQQSRDAGVNQG---DLPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLP 586
            A S W   L    C ++    + SR  S+ +K    G          E  +++     +S + L+     LA++AG LA  AQN         + +LCE     S + S   ++    V +G   D+P + +  L  I   + ++ D +ER  HGKP +S+HK   IPDV+V P S E+VS+I++ C  Y++P+VPYGGATS+EGHTL+P+ G+ +DM  M R+  + IED+D  VE G+G+++LNE L   G  FPLDPGPGA+IGGMCA RCSGS AV+YGTMRD+V+S+  VLA+G ++KT SRARKSAAGYDLTRL+IGSEGTLG++TEVTLRL++ P+ S      FP++++AA  A AT+ +G++V R EL+D+  VR +N  NG    E  TL++E +G     +E Q  +V+ +  +H G   + ++D     ++W+ RKEALWA  A  P+ E MI+DVCVPLS L +LI +SK ++ ASSL   ++AHAGDGNFH  I+F P++ E+  EA+ L+ FMV +AL+++GTCTGEHG+G GK+KYLEKE G  AL+TM  IK ALDP N++NPGK++P
Sbjct:    2 AFSFWLARLRLLSCSKKSAVPNASRQSSYLDKFQFSGSQKNVPSTTAEKTKTQFFSWSSSLLPLA-----LAVSAGSLAFQAQNT--------QPSLCEPTNIDSRKVSIGGKTSTEFVVKGIHKDVPQELIDELMAICQ-DNLTLDYDERFYHGKPQNSFHKAVNIPDVVVFPRSEEEVSQIVKSCDKYKVPIVPYGGATSIEGHTLSPNGGVCIDMTLMKRVKALHIEDMDVIVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPEHSVVAMCNFPTIKDAADVAIATMLSGIQVSRVELLDEVQVRAVNIANGKNLPEVPTLMFEFIGTEAYSLE-QTKIVQRIVSEHNGSDFVFAEDPLAKKELWKIRKEALWACFAMEPNFEAMISDVCVPLSHLAELISRSKQELDASSLVCTVIAHAGDGNFHTVILFDPNQEEQRREAERLNQFMVYTALSMEGTCTGEHGVGTGKMKYLEKELGIEALKTMKRIKEALDPNNIMNPGKLIP 571          
The following BLAST results are available for this feature:
BLAST of EWM23933.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105218|gb|EWM23933.1|0.000e+0100.00d-lactate dehydrogenase [Nannochloropsis gaditana][more]
gi|657989871|ref|XP_008387152.1|1.323e-17650.60PREDICTED: D-lactate dehydrogenase [cytochrome], m... [more]
gi|727639858|ref|XP_010491229.1|5.013e-17653.26PREDICTED: D-lactate dehydrogenase [cytochrome], m... [more]
gi|565458648|ref|XP_006287323.1|6.661e-17653.26hypothetical protein CARUB_v10000524mg, partial [C... [more]
gi|1190996512|ref|XP_020878860.1|1.136e-17553.04D-lactate dehydrogenase [cytochrome], mitochondria... [more]
gi|18415252|ref|NP_568170.1|1.295e-17553.38FAD-linked oxidases family protein [Arabidopsis th... [more]
gi|727560763|ref|XP_010452597.1|8.384e-17452.61PREDICTED: D-lactate dehydrogenase [cytochrome], m... [more]
gi|1102692699|gb|OIV92264.1|9.572e-17452.48hypothetical protein TanjilG_00282 [Lupinus angust... [more]
gi|567171062|ref|XP_006399130.1|2.657e-17352.49hypothetical protein EUTSA_v10013121mg [Eutrema sa... [more]
gi|508717769|gb|EOY09666.1|2.855e-17346.15FAD-linked oxidases family protein isoform 1 [Theo... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6759rna6759Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications