EWM23926.1, cds6737 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|585105211|gb|EWM23926.1| (hypothetical protein Naga_100082g21 [Nannochloropsis gaditana]) HSP 1 Score: 361.688 bits (927), Expect = 1.587e-126 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 1 MLLPSLAKRFLGLGCAMETAAAVSAATIKNRRPYIAVCGMQRFFSDGGGGGAMGGDGGGSITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
MLLPSLAKRFLGLGCAMETAAAVSAATIKNRRPYIAVCGMQRFFSDGGGGGAMGGDGGGSITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC
Sbjct: 1 MLLPSLAKRFLGLGCAMETAAAVSAATIKNRRPYIAVCGMQRFFSDGGGGGAMGGDGGGSITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|298705388|emb|CBJ28678.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 124.02 bits (310), Expect = 7.192e-33 Identity = 67/122 (54.92%), Postives = 87/122 (71.31%), Query Frame = 0
Query: 60 SITYSGGQATSGQGGFYGAGGARANKT-QTKHRPEAVAHAADIKSLRMLMEEVEELEVQL-RSADELP-KQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
++TYSGGQA QGGFYGAGGAR+ + Q HRPEA+A DI+ LR M+ V E+E++L R D++ + I +KSAIKK+ S M ELL RL++K QPVWGL+ ER+LVK AR + NSC
Sbjct: 36 NVTYSGGQAGV-QGGFYGAGGARSQASPQAHHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLKIKDQPVWGLTQEERELVKVAREKVNSC 156
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|1210517304|dbj|GAX23939.1| (hypothetical protein FisN_20Hh147 [Fistulifera solaris]) HSP 1 Score: 108.612 bits (270), Expect = 7.204e-27 Identity = 59/124 (47.58%), Postives = 80/124 (64.52%), Query Frame = 0
Query: 60 SITYSGGQATSGQGGFYGAGGARAN----KTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLR-SADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
+ITYSGGQ T GQGGFY +GGAR+N + + R +A + D++ + +M VE LE QLR +A K I +KSAIKK + + E L RLEL+GQPVWGLS ER+++ AR + N+C
Sbjct: 32 AITYSGGQPTEGQGGFYASGGARSNVDDYASDDETRVRMIALSQDVEKIEHVMTAVESLESQLRENAGVNGKSIELKSAIKKLMTDPSVLESLNRLELEGQPVWGLSTEEREMIIMAREKVNAC 155
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|1210511995|dbj|GAX28850.1| (hypothetical protein FisN_20Lh147 [Fistulifera solaris]) HSP 1 Score: 107.457 bits (267), Expect = 1.570e-26 Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 0
Query: 60 SITYSGGQATSGQGGFYGAGGARAN----KTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQL-RSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
SITYSGGQ T GQGGFY +GGAR+N + + R +A + D++ + +M VE LE QL +A K I +KSAIKK + + E L RLEL+GQPVWGLS ER+++ AR + N+C
Sbjct: 34 SITYSGGQPTEGQGGFYASGGARSNVDDYASDDETRGRMIALSQDVEKIEQVMTAVESLESQLLDNAGVNSKSIELKSAIKKLMTDPSVLESLNRLELEGQPVWGLSTEEREMIIMAREKVNAC 157
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|219118398|ref|XP_002179973.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408230|gb|EEC48164.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.8853 bits (211), Expect = 4.647e-18 Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0
Query: 58 GGSITYSGGQATSGQGGFYGAGGARA---NKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELP------KQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
GSITYSGGQAT GQGG+YG+GGAR + R +A A D++ ++ +M E+E LE LRS +E K I +K+ IKK + D+ E L RLE++G+PVWGLS ER+++ AR + N C
Sbjct: 30 SGSITYSGGQATEGQGGYYGSGGARVLPHDSATASGRSMMLALAQDVEKIQSVMTELEVLENLLRSEEETAQGSVTGKSIELKANIKKLMTAADVLESLNRLEVQGEPVWGLSTEEREMIVTAREKVNEC 159
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|953485531|emb|CEG50414.1| (hypothetical protein PHALS_08126 [Plasmopara halstedii]) HSP 1 Score: 72.4034 bits (176), Expect = 3.395e-13 Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 0
Query: 62 TYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTE---LLKRLELKGQPVWGLSVSERDLVKEA 171
TYSGGQ + GQGGFYG+ R ++T +K RP A A D+ L+ LM + E +V L +A+E +KK R +E L++RL ++G PVWGLS +R+ V E
Sbjct: 26 TYSGGQPSEGQGGFYGSAKTR-SETGSKFRPGARAEPQDLTKLQHLMNQWEAQKVSL-AAEE-----------RKKLLARIASEEGTLIQRLLIRGAPVWGLSTQQREFVAEC 125
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|695428026|ref|XP_009529849.1| (hypothetical protein PHYSODRAFT_286438 [Phytophthora sojae] >gi|348676282|gb|EGZ16100.1| hypothetical protein PHYSODRAFT_286438 [Phytophthora sojae]) HSP 1 Score: 72.4034 bits (176), Expect = 3.667e-13 Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 0
Query: 61 ITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKE 170
TYSGGQ + GQGGFYG+ R+ T +K P A A D+ L+ LM++ E + L + ++ K A+ + AS + L++RL ++G PVWGLS +R+ V E
Sbjct: 26 TTYSGGQPSEGQGGFYGSAKTRSEAT-SKFSPGARAEPQDLTKLQQLMQQWEAQKASLAAEEQ-------KQALARIASEEET--LIQRLLIRGAPVWGLSTQQREFVAE 125
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|676383327|ref|XP_009034942.1| (expressed protein [Aureococcus anophagefferens] >gi|323454239|gb|EGB10109.1| expressed protein [Aureococcus anophagefferens]) HSP 1 Score: 72.4034 bits (176), Expect = 4.669e-13 Identity = 52/122 (42.62%), Postives = 77/122 (63.11%), Query Frame = 0
Query: 58 GGSITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPK-QISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
SITYSGGQA+ GQGGFYG+GGAR K +T+ AVA A + SL +M++ L + +AD + + I K+++KK + +++ LE+K +PVWGL+ +ER LV+EAR +C
Sbjct: 23 SNSITYSGGQASVGQGGFYGSGGARCTKRKTEWNASAVASAEKVASLAEIMDQAYALRETITAADPVSEAAIESKASLKKLMTSPATVKVIDCLEVKNEPVWGLTQAERSLVREAREMSLNC 144
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|675191739|ref|XP_008904754.1| (hypothetical protein PPTG_10970 [Phytophthora parasitica INRA-310] >gi|566024954|gb|ETI47865.1| hypothetical protein F443_08005 [Phytophthora parasitica P1569] >gi|567962259|gb|ETK87786.1| hypothetical protein L915_07830 [Phytophthora parasitica] >gi|567990987|gb|ETL41205.1| hypothetical protein L916_07760 [Phytophthora parasitica] >gi|568020239|gb|ETL94373.1| hypothetical protein L917_07645 [Phytophthora parasitica] >gi|568050659|gb|ETM47593.1| hypothetical protein L914_07723 [Phytophthora parasitica] >gi|568095549|gb|ETN10317.1| hypothetical protein PPTG_10970 [Phytophthora parasitica INRA-310] >gi|570328622|gb|ETO76570.1| hypothetical protein F444_08050 [Phytophthora parasitica P1976] >gi|570952436|gb|ETP17693.1| hypothetical protein F441_07974 [Phytophthora parasitica CJ01A1] >gi|570986755|gb|ETP45684.1| hypothetical protein F442_07943 [Phytophthora parasitica P10297] >gi|970644851|gb|KUF85530.1| hypothetical protein AM587_10010228 [Phytophthora nicotianae] >gi|970657050|gb|KUF94982.1| Cell 5A endo-1 [Phytophthora nicotianae]) HSP 1 Score: 71.633 bits (174), Expect = 7.945e-13 Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 0
Query: 61 ITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARR 173
TYSGGQ + GQGGFYG+ R+ +T +K P A A D+ L+ LM++ E + L +A+E K+++ + + + T L++RL ++G PVWGLS +R+ V E R
Sbjct: 25 TTYSGGQPSEGQGGFYGSAKTRS-ETSSKFNPGARAEPQDLTKLQQLMKQWEAQKASL-AAEEQKKELA-------RIANEEET-LIQRLLIRGAPVWGLSTRQREFVAECSR 127
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|1214708780|gb|OWZ20024.1| (hypothetical protein PHMEG_0005626 [Phytophthora megakarya]) HSP 1 Score: 71.2478 bits (173), Expect = 9.268e-13 Identity = 41/109 (37.61%), Postives = 63/109 (57.80%), Query Frame = 0
Query: 62 TYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKE 170
TYSGGQ + GQGGFYG+ R ++ +K P A A D+ L++LM++ E + L + ++ K A+ + AS + L++RL ++G PVWGLS +R V E
Sbjct: 24 TYSGGQPSEGQGGFYGSAKTR-SEVNSKFHPGARAEPQDLTKLQLLMKQWEAQKASLAAEEQ-------KKALARIASAEET--LIQRLLIRGAPVWGLSTQQRQFVAE 122 The following BLAST results are available for this feature:
BLAST of EWM23926.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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