EWM23926.1, cds6737 (CDS) Nannochloropsis gaditana

Overview
NameEWM23926.1
Unique Namecds6737
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:425260..425796 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23926.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100082g21.9358.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:425260..425796 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|585105211|gb|EWM23926.1| (hypothetical protein Naga_100082g21 [Nannochloropsis gaditana])

HSP 1 Score: 361.688 bits (927), Expect = 1.587e-126
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:    1 MLLPSLAKRFLGLGCAMETAAAVSAATIKNRRPYIAVCGMQRFFSDGGGGGAMGGDGGGSITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
            MLLPSLAKRFLGLGCAMETAAAVSAATIKNRRPYIAVCGMQRFFSDGGGGGAMGGDGGGSITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC
Sbjct:    1 MLLPSLAKRFLGLGCAMETAAAVSAATIKNRRPYIAVCGMQRFFSDGGGGGAMGGDGGGSITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|298705388|emb|CBJ28678.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 124.02 bits (310), Expect = 7.192e-33
Identity = 67/122 (54.92%), Postives = 87/122 (71.31%), Query Frame = 0
Query:   60 SITYSGGQATSGQGGFYGAGGARANKT-QTKHRPEAVAHAADIKSLRMLMEEVEELEVQL-RSADELP-KQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
            ++TYSGGQA   QGGFYGAGGAR+  + Q  HRPEA+A   DI+ LR  M+ V E+E++L R  D++  + I +KSAIKK+ S   M ELL RL++K QPVWGL+  ER+LVK AR + NSC
Sbjct:   36 NVTYSGGQAGV-QGGFYGAGGARSQASPQAHHRPEAIAAVDDIRRLREAMQHVSEMEIELGRLGDKVSGRSIELKSAIKKRLSSPTMLELLTRLKIKDQPVWGLTQEERELVKVAREKVNSC 156          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|1210517304|dbj|GAX23939.1| (hypothetical protein FisN_20Hh147 [Fistulifera solaris])

HSP 1 Score: 108.612 bits (270), Expect = 7.204e-27
Identity = 59/124 (47.58%), Postives = 80/124 (64.52%), Query Frame = 0
Query:   60 SITYSGGQATSGQGGFYGAGGARAN----KTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLR-SADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
            +ITYSGGQ T GQGGFY +GGAR+N     +  + R   +A + D++ +  +M  VE LE QLR +A    K I +KSAIKK  +   + E L RLEL+GQPVWGLS  ER+++  AR + N+C
Sbjct:   32 AITYSGGQPTEGQGGFYASGGARSNVDDYASDDETRVRMIALSQDVEKIEHVMTAVESLESQLRENAGVNGKSIELKSAIKKLMTDPSVLESLNRLELEGQPVWGLSTEEREMIIMAREKVNAC 155          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|1210511995|dbj|GAX28850.1| (hypothetical protein FisN_20Lh147 [Fistulifera solaris])

HSP 1 Score: 107.457 bits (267), Expect = 1.570e-26
Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 0
Query:   60 SITYSGGQATSGQGGFYGAGGARAN----KTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQL-RSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
            SITYSGGQ T GQGGFY +GGAR+N     +  + R   +A + D++ +  +M  VE LE QL  +A    K I +KSAIKK  +   + E L RLEL+GQPVWGLS  ER+++  AR + N+C
Sbjct:   34 SITYSGGQPTEGQGGFYASGGARSNVDDYASDDETRGRMIALSQDVEKIEQVMTAVESLESQLLDNAGVNSKSIELKSAIKKLMTDPSVLESLNRLELEGQPVWGLSTEEREMIIMAREKVNAC 157          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|219118398|ref|XP_002179973.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408230|gb|EEC48164.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 85.8853 bits (211), Expect = 4.647e-18
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0
Query:   58 GGSITYSGGQATSGQGGFYGAGGARA---NKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELP------KQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
             GSITYSGGQAT GQGG+YG+GGAR    +      R   +A A D++ ++ +M E+E LE  LRS +E        K I +K+ IKK  +  D+ E L RLE++G+PVWGLS  ER+++  AR + N C
Sbjct:   30 SGSITYSGGQATEGQGGYYGSGGARVLPHDSATASGRSMMLALAQDVEKIQSVMTELEVLENLLRSEEETAQGSVTGKSIELKANIKKLMTAADVLESLNRLEVQGEPVWGLSTEEREMIVTAREKVNEC 159          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|953485531|emb|CEG50414.1| (hypothetical protein PHALS_08126 [Plasmopara halstedii])

HSP 1 Score: 72.4034 bits (176), Expect = 3.395e-13
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 0
Query:   62 TYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTE---LLKRLELKGQPVWGLSVSERDLVKEA 171
            TYSGGQ + GQGGFYG+   R ++T +K RP A A   D+  L+ LM + E  +V L +A+E           +KK   R  +E   L++RL ++G PVWGLS  +R+ V E 
Sbjct:   26 TYSGGQPSEGQGGFYGSAKTR-SETGSKFRPGARAEPQDLTKLQHLMNQWEAQKVSL-AAEE-----------RKKLLARIASEEGTLIQRLLIRGAPVWGLSTQQREFVAEC 125          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|695428026|ref|XP_009529849.1| (hypothetical protein PHYSODRAFT_286438 [Phytophthora sojae] >gi|348676282|gb|EGZ16100.1| hypothetical protein PHYSODRAFT_286438 [Phytophthora sojae])

HSP 1 Score: 72.4034 bits (176), Expect = 3.667e-13
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 0
Query:   61 ITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKE 170
             TYSGGQ + GQGGFYG+   R+  T +K  P A A   D+  L+ LM++ E  +  L + ++       K A+ + AS  +   L++RL ++G PVWGLS  +R+ V E
Sbjct:   26 TTYSGGQPSEGQGGFYGSAKTRSEAT-SKFSPGARAEPQDLTKLQQLMQQWEAQKASLAAEEQ-------KQALARIASEEET--LIQRLLIRGAPVWGLSTQQREFVAE 125          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|676383327|ref|XP_009034942.1| (expressed protein [Aureococcus anophagefferens] >gi|323454239|gb|EGB10109.1| expressed protein [Aureococcus anophagefferens])

HSP 1 Score: 72.4034 bits (176), Expect = 4.669e-13
Identity = 52/122 (42.62%), Postives = 77/122 (63.11%), Query Frame = 0
Query:   58 GGSITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPK-QISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARRRFNSC 178
              SITYSGGQA+ GQGGFYG+GGAR  K +T+    AVA A  + SL  +M++   L   + +AD + +  I  K+++KK  +     +++  LE+K +PVWGL+ +ER LV+EAR    +C
Sbjct:   23 SNSITYSGGQASVGQGGFYGSGGARCTKRKTEWNASAVASAEKVASLAEIMDQAYALRETITAADPVSEAAIESKASLKKLMTSPATVKVIDCLEVKNEPVWGLTQAERSLVREAREMSLNC 144          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|675191739|ref|XP_008904754.1| (hypothetical protein PPTG_10970 [Phytophthora parasitica INRA-310] >gi|566024954|gb|ETI47865.1| hypothetical protein F443_08005 [Phytophthora parasitica P1569] >gi|567962259|gb|ETK87786.1| hypothetical protein L915_07830 [Phytophthora parasitica] >gi|567990987|gb|ETL41205.1| hypothetical protein L916_07760 [Phytophthora parasitica] >gi|568020239|gb|ETL94373.1| hypothetical protein L917_07645 [Phytophthora parasitica] >gi|568050659|gb|ETM47593.1| hypothetical protein L914_07723 [Phytophthora parasitica] >gi|568095549|gb|ETN10317.1| hypothetical protein PPTG_10970 [Phytophthora parasitica INRA-310] >gi|570328622|gb|ETO76570.1| hypothetical protein F444_08050 [Phytophthora parasitica P1976] >gi|570952436|gb|ETP17693.1| hypothetical protein F441_07974 [Phytophthora parasitica CJ01A1] >gi|570986755|gb|ETP45684.1| hypothetical protein F442_07943 [Phytophthora parasitica P10297] >gi|970644851|gb|KUF85530.1| hypothetical protein AM587_10010228 [Phytophthora nicotianae] >gi|970657050|gb|KUF94982.1| Cell 5A endo-1 [Phytophthora nicotianae])

HSP 1 Score: 71.633 bits (174), Expect = 7.945e-13
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   61 ITYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKEARR 173
             TYSGGQ + GQGGFYG+   R+ +T +K  P A A   D+  L+ LM++ E  +  L +A+E  K+++       + +  + T L++RL ++G PVWGLS  +R+ V E  R
Sbjct:   25 TTYSGGQPSEGQGGFYGSAKTRS-ETSSKFNPGARAEPQDLTKLQQLMKQWEAQKASL-AAEEQKKELA-------RIANEEET-LIQRLLIRGAPVWGLSTRQREFVAECSR 127          
BLAST of EWM23926.1 vs. NCBI_GenBank
Match: gi|1214708780|gb|OWZ20024.1| (hypothetical protein PHMEG_0005626 [Phytophthora megakarya])

HSP 1 Score: 71.2478 bits (173), Expect = 9.268e-13
Identity = 41/109 (37.61%), Postives = 63/109 (57.80%), Query Frame = 0
Query:   62 TYSGGQATSGQGGFYGAGGARANKTQTKHRPEAVAHAADIKSLRMLMEEVEELEVQLRSADELPKQISIKSAIKKKASGRDMTELLKRLELKGQPVWGLSVSERDLVKE 170
            TYSGGQ + GQGGFYG+   R ++  +K  P A A   D+  L++LM++ E  +  L + ++       K A+ + AS  +   L++RL ++G PVWGLS  +R  V E
Sbjct:   24 TYSGGQPSEGQGGFYGSAKTR-SEVNSKFHPGARAEPQDLTKLQLLMKQWEAQKASLAAEEQ-------KKALARIASAEET--LIQRLLIRGAPVWGLSTQQRQFVAE 122          
The following BLAST results are available for this feature:
BLAST of EWM23926.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105211|gb|EWM23926.1|1.587e-126100.00hypothetical protein Naga_100082g21 [Nannochlorops... [more]
gi|298705388|emb|CBJ28678.1|7.192e-3354.92conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210517304|dbj|GAX23939.1|7.204e-2747.58hypothetical protein FisN_20Hh147 [Fistulifera sol... [more]
gi|1210511995|dbj|GAX28850.1|1.570e-2647.58hypothetical protein FisN_20Lh147 [Fistulifera sol... [more]
gi|219118398|ref|XP_002179973.1|4.647e-1845.38predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|953485531|emb|CEG50414.1|3.395e-1340.71hypothetical protein PHALS_08126 [Plasmopara halst... [more]
gi|695428026|ref|XP_009529849.1|3.667e-1338.18hypothetical protein PHYSODRAFT_286438 [Phytophtho... [more]
gi|676383327|ref|XP_009034942.1|4.669e-1342.62expressed protein [Aureococcus anophagefferens] >g... [more]
gi|675191739|ref|XP_008904754.1|7.945e-1338.05hypothetical protein PPTG_10970 [Phytophthora para... [more]
gi|1214708780|gb|OWZ20024.1|9.268e-1337.61hypothetical protein PHMEG_0005626 [Phytophthora m... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6753rna6753Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications