EWM23958.1, cds6728 (CDS) Nannochloropsis gaditana

Overview
NameEWM23958.1
Unique Namecds6728
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:396839..397292 +
Alignment locationCM002469.1:397390..398504 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23958.1
Productdihydrouridine synthase
Orig transcript idgnl|cribi|Naga_100027g53.136.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:396839..397292 +
CM002469.1supercontigCM002469.1:397390..398504 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0055114oxidation-reduction process
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0050660flavin adenine dinucleotide binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR018517tRNA_hU_synthase_CS
IPR001269tRNA_hU_synthase
IPR013785Aldolase_TIM
Homology
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|585105244|gb|EWM23958.1| (dihydrouridine synthase [Nannochloropsis gaditana])

HSP 1 Score: 1080.86 bits (2794), Expect = 0.000e+0
Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query:    1 MSFYTIPFLALKSFLHRVAERPRVPSHMVSRHQSQRQTRTPPLSIIAVFLINFHHIIPTVELRSMRVNGMSSIPHFLHKHYSPIHIGRVILRHPAVSKRYASSITMMKQEHMHATRGEGHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAIVLTKGAIVSPVSWYRRHREGHALALQRVKQLCVSGNATNAGLKERLLEKRASRRIAL 522
            MSFYTIPFLALKSFLHRVAERPRVPSHMVSRHQSQRQTRTPPLSIIAVFLINFHHIIPTVELRSMRVNGMSSIPHFLHKHYSPIHIGRVILRHPAVSKRYASSITMMKQEHMHATRGEGHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAIVLTKGAIVSPVSWYRRHREGHALALQRVKQLCVSGNATNAGLKERLLEKRASRRIAL
Sbjct:    1 MSFYTIPFLALKSFLHRVAERPRVPSHMVSRHQSQRQTRTPPLSIIAVFLINFHHIIPTVELRSMRVNGMSSIPHFLHKHYSPIHIGRVILRHPAVSKRYASSITMMKQEHMHATRGEGHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAIVLTKGAIVSPVSWYRRHREGHALALQRVKQLCVSGNATNAGLKERLLEKRASRRIAL 522          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|298715097|emb|CBJ27785.1| (dihydrouridine synthase [Ectocarpus siliculosus])

HSP 1 Score: 296.975 bits (759), Expect = 9.747e-92
Identity = 168/354 (47.46%), Postives = 221/354 (62.43%), Query Frame = 0
Query:  109 QEHMHATRGEGHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFA--NVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSS 460
            +EH  A   E      ++G P++IAAPMV+QS+ AFR LVRR+G  LAYTQM HA  FA  N + +R   +DG+    ++  DRPLI QF G++ D +VRAA  ++H  DAVDLNLGCPQ+IAK+G+YGAYLL    L   +++ M + L+VPVT KIR    E DTL+L + +E AG  LLT+HGRT    K   G ADW  I K+K    IPVVANGG+ET  DA      TGADAVMSSEGLLENP+LF    S L+  E         E++   +AHR L+F  EY+EL K++     + ++KGHLFKMLY +LE   ++DLR +LG       + + +V E   T  S+
Sbjct:   77 REHSEA---EPRSFFEQIGRPKYIAAPMVEQSEAAFRYLVRRHGCGLAYTQMLHAEKFAPDNAEKFRRRRFDGV----DDEEDRPLIVQFCGNNPDTVVRAARHVEHRCDAVDLNLGCPQKIAKKGNYGAYLLPNPQLCEDIVAAMSRELSVPVTVKIRAQDRESDTLDLARRLEGAGAQLLTVHGRTVSSQKTKQGAADWDIIRKVKEVVDIPVVANGGIETGADAERLLEETGADAVMSSEGLLENPALF---DSDLIPME---------ELQGLEVAHRILSFTTEYMELVKRY--PAPMISIKGHLFKMLYRLLEC--HHDLRARLGHYQCDAIEADVIVHEASRTHTSA 407          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|1214706674|gb|OWZ18183.1| (TRNA-dihydrouridine synthase [Phytophthora megakarya])

HSP 1 Score: 274.633 bits (701), Expect = 3.169e-84
Identity = 152/371 (40.97%), Postives = 216/371 (58.22%), Query Frame = 0
Query:  119 GHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQEL---LETRYSSIDVAIVLTKGAIVSPVSWYRRHREGH 486
            G+D    +G+P+ I APMV QS+LAFR L R+ G D  YT M H+  FA    YRE+ ++       +  DRPL+ QF G+    ++ AA ++++  DAVDLNLGCPQ IA++GHYG++L+ +++ V  ++  +   L +PVT KIR+ P++ +TLE    +++AG  LLT+HGRT+E NK +V + DW  I +IK    IPV+ANGG+ETYED   C   TG D VMSSEGLLENP+LF   ++    G+ +                  L  A++YLE A   +P      V+ HLFKML+  L V  + DLR+ L A     ++   +V EL   L+   SS D +    K    +  SWYRRHR+G 
Sbjct:    6 GYDFYRAIGSPKRIVAPMVDQSELAFRMLCRKLGADCCYTPMLHSRLFAESAEYREKMFE------RHIQDRPLVVQFCGNDPKTVLAAAKMVENHCDAVDLNLGCPQGIARKGHYGSFLMHDKDTVKSIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETYEDVDRCLEATGCDGVMSSEGLLENPALFAETNN--TPGDDTSF----------------LELAKQYLECA-TLYPPASDKIVRAHLFKMLFQDLRV--HSDLRDALAA-AKSQEEMVDIVDELAERLKAAESSNDGS-EEEKVVYAAETSWYRRHRQGQ 347          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|635369704|emb|CCI42174.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 273.478 bits (698), Expect = 7.801e-84
Identity = 149/366 (40.71%), Postives = 213/366 (58.20%), Query Frame = 0
Query:  119 GHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAIVLTKGAIVSPVSWYRRHRE 484
            GH+    +G+P+ I APMV QS+LAFR L R +G  L YT MFH+  FA  + YR   ++      ++  DRPLI QF G+  + +V AA  ++   DAVD+NLGCPQ IA++G+YGA+L++++  V  ++  +V  +AVPVT KIR+ P+E +T+E  K +E AG  LL +HGRT+E NK +VG+ +W  I KIK A  IPV+ANGG+ET ED   C  VTGAD VMSSE +L NP+LF      L  G   +   C      F LA+  ++F   Y        P   +  V+ HLFK+L+   ++  + DLR  L A  N   + + ++Q L + + + +     L         SWYRRHR+
Sbjct:    6 GHEFFRSIGSPQRIVAPMVDQSELAFRMLCREHGAQLCYTPMFHSRLFAESQEYRSRMFE------QHVRDRPLIVQFCGNDPETMVTAAKYVEGHCDAVDINLGCPQGIARKGNYGAFLMKDKARVCGIVEKLVDEVAVPVTCKIRVFPDEAETIEFTKMLEKAGCDLLVVHGRTKEMNKGTVGQVNWEIIKKIKNALSIPVIANGGIETPEDIAECLEVTGADGVMSSEAILGNPALF---DKSLQFGPLHQKGPC-----YFDLANEYMDFVTTY--------PTGNLKIVRAHLFKLLFE--DLTHHTDLRSAL-ASANTFSEMKHLLQVLGDRKNAPVKYEYTLEN-------SWYRRHRK 339          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|568051514|gb|ETM48419.1| (hypothetical protein L914_07046 [Phytophthora parasitica])

HSP 1 Score: 273.092 bits (697), Expect = 1.419e-83
Identity = 151/383 (39.43%), Postives = 218/383 (56.92%), Query Frame = 0
Query:  106 MMKQEHMHATRGEGHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLE--TRYSSIDVAIVLTKGAIVSPVSWYRRHREGH 486
            M +Q+     +  G+D    +G+P+ I APMV QS+LAFR L R+ G +  YT MFH+  FA    YRE+ ++       +  DRPL+ QF G+    ++ AA +++   DAVDLNLGCPQ IA++GHYG++L+ +++ V  ++  +   L +PVT KIR+ P++ +TLE    +++AG  LLT+HGRT+E NK +V + DW  I +IK    IPV+ANGG+ET+ED   C   TG D VMSSEGLLENP+LF   ++    GE +                  L  A++YLE A   +P      V+ HLFK+L+  L V  + DLR+ L A  +  +  E +V EL        S +      K    +  SWYRRHR+G 
Sbjct:    1 MAEQQPTTMVKLRGYDFYRAIGSPKHIVAPMVDQSELAFRMLCRKLGAECCYTPMFHSRLFAESAEYREKMFE------HHIQDRPLVVQFCGNDPKTVLAAAKMVEGHCDAVDLNLGCPQSIARKGHYGSFLMHDKDTVKAIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFAETNN--TPGEDTSF----------------LELAKQYLECA-TLYPPASDKIVRAHLFKILFQDLRV--HSDLRDALAAAKSQDEMVE-IVDELAMRLKEAQSENAGPEAKKVTYAAETSWYRRHRQGQ 355          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|566025843|gb|ETI48754.1| (hypothetical protein F443_07263 [Phytophthora parasitica P1569] >gi|567963145|gb|ETK88651.1| hypothetical protein L915_07133 [Phytophthora parasitica] >gi|567991843|gb|ETL42044.1| hypothetical protein L916_07083 [Phytophthora parasitica] >gi|568021093|gb|ETL95195.1| hypothetical protein L917_06972 [Phytophthora parasitica] >gi|570953266|gb|ETP18523.1| hypothetical protein F441_07272 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 272.322 bits (695), Expect = 2.849e-83
Identity = 151/383 (39.43%), Postives = 218/383 (56.92%), Query Frame = 0
Query:  106 MMKQEHMHATRGEGHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLE--TRYSSIDVAIVLTKGAIVSPVSWYRRHREGH 486
            M +Q+     +  G+D    +G+P+ I APMV QS+LAFR L R+ G +  YT MFH+  FA    YRE+ ++       +  DRPL+ QF G+    ++ AA +++   DAVDLNLGCPQ IA++GHYG++L+ +++ V  ++  +   L +PVT KIR+ P++ +TLE    +++AG  LLT+HGRT+E NK +V + DW  I +IK    IPV+ANGG+ET+ED   C   TG D VMSSEGLLENP+LF   ++    GE +                  L  A++YLE A   +P      V+ HLFK+L+  L V  + DLR+ L A  +  +  E +V EL        S +      K    +  SWYRRHR+G 
Sbjct:    1 MAEQQPTTMVKLRGYDFYRAIGSPKHIVAPMVDQSELAFRMLCRKLGAECCYTPMFHSRLFAESAEYREKMFE------HHIQDRPLVVQFCGNDPKTVLAAAKMVEGHCDAVDLNLGCPQGIARKGHYGSFLMHDKDTVKAIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFAETNN--TPGEDTSF----------------LELAKQYLECA-TLYPPASDKIVRAHLFKILFQDLRV--HSDLRDALAAAKSQDEMVE-IVDELAMRLKEAQSENAGPEAKKVTYAAETSWYRRHRQGQ 355          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|570329513|gb|ETO77461.1| (hypothetical protein F444_07334 [Phytophthora parasitica P1976] >gi|570987821|gb|ETP46425.1| hypothetical protein F442_07329 [Phytophthora parasitica P10297])

HSP 1 Score: 272.322 bits (695), Expect = 2.911e-83
Identity = 151/383 (39.43%), Postives = 218/383 (56.92%), Query Frame = 0
Query:  106 MMKQEHMHATRGEGHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLE--TRYSSIDVAIVLTKGAIVSPVSWYRRHREGH 486
            M +Q+     +  G+D    +G+P+ I APMV QS+LAFR L R+ G +  YT MFH+  FA    YRE+ ++       +  DRPL+ QF G+    ++ AA +++   DAVDLNLGCPQ IA++GHYG++L+ +++ V  ++  +   L +PVT KIR+ P++ +TLE    +++AG  LLT+HGRT+E NK +V + DW  I +IK    IPV+ANGG+ET+ED   C   TG D VMSSEGLLENP+LF   ++    GE +                  L  A++YLE A   +P      V+ HLFK+L+  L V  + DLR+ L A  +  +  E +V EL        S +      K    +  SWYRRHR+G 
Sbjct:    1 MAEQQPTTMVKLRGYDFYRAIGSPKHIVAPMVDQSELAFRMLCRKLGAECCYTPMFHSRLFAESAEYREKMFE------HHIQDRPLVVQFCGNDPKTVLAAAKMVEGHCDAVDLNLGCPQGIARKGHYGSFLMHDKDTVKAIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFAETNN--TPGEDTSF----------------LELAKQYLECA-TLYPPASDKIVRAHLFKILFQDLRV--HSDLRDALAAAKSQDEMVE-IVDELTMRLKEAQSENAGPEAKKVTYAAETSWYRRHRQGQ 355          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|673049571|ref|XP_008878746.1| (hypothetical protein H310_13139 [Aphanomyces invadans] >gi|574465674|gb|ETV92710.1| hypothetical protein H310_13139 [Aphanomyces invadans])

HSP 1 Score: 271.937 bits (694), Expect = 9.955e-83
Identity = 154/366 (42.08%), Postives = 209/366 (57.10%), Query Frame = 0
Query:  119 GHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAIVLTKGAIVSPVSWYRRHRE 484
            G  L   L  P+ I APMV QS+LAFR L R+YG DL YT MFHA  F     YRE  W           DRPL  QF G++ D ++ AA  ++   DA+DLNLGCPQ IAK+G YGA+L+ E ++V  ++S +  +L+VPVT KIRLLP   DTL     + DAG   L +HGRT+E NK  V + DW +I ++K A  IPV ANGG+ET +D + C   TG + VMSSEG+LE P+LF          +R +            +  RQ++ A EYL+LAK F P E    ++ HLFK+L+  L+V  + DLRE++     G+ Q   V+  + +   + +D A  +         SWYRRHR+
Sbjct:   47 GWKLYNDLNQPKRIVAPMVDQSELAFRMLTRKYGADLCYTPMFHARMFQEDATYRETAWQ------VEPTDRPLFVQFCGNNPDTVLHAARYVESHCDAIDLNLGCPQGIAKKGRYGAFLMHEPDVVRSIVSKLSSNLSVPVTCKIRLLPKYEDTLAFCNMLIDAGCCWLVVHGRTKEMNKHLVRECDWDSIARLKKALPIPVFANGGIETDDDVVRCMLETGVNGVMSSEGILERPALF--------ANDRDK----------HGVPIRQIDVAIEYLQLAKTFPPPEKF--LRAHLFKILFQELKV--HTDLREQI-----GLAQTHDVLWAITKELKARLDAAAPVPTSV---EGSWYRRHRK 376          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|145551887|ref|XP_001461620.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124429455|emb|CAK94247.1| unnamed protein product (macronuclear) [Paramecium tetraurelia])

HSP 1 Score: 270.396 bits (690), Expect = 1.027e-82
Identity = 150/358 (41.90%), Postives = 211/358 (58.94%), Query Frame = 0
Query:  126 LGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLETRYSSIDVAIVLTKGAIVSPVSWYRRHR 483
            LG+P++I APMV QS+LAFR L R+YG  LAYT M H+      K Y++E        PE   DRPL AQ  G     L++AA +IQ + DA+D+NLGCPQ IA++G YGAYLLE+R  V+ ++  + +++ VPVT KIR+  + + TL+L K I++AG ++LT+HGRT+EQNK  VG+ DW  I +IK    IPV ANGG+ T+ D   C   T  DAVMSSE LLENP+LF         GE   +                 + A EY++ AK++  R  +A +K HLFK+LY  L++    DLR KLG+     K YE+ ++ ++E +    DV            + WY+R++
Sbjct:   15 LGSPKFICAPMVDQSELAFRMLTRKYGTTLAYTPMLHSRIMTESKSYKDE---FFTTCPE---DRPLFAQLCGHDPQVLIKAALMIQDQCDAIDINLGCPQGIARKGLYGAYLLEKREQVLTIVKELKQNINVPVTCKIRMFKDRKRTLDLTKDIQEAGCSILTVHGRTKEQNKDFVGQCDWTIIAEIKQILQIPVFANGGIYTWSDVERCLQETKVDAVMSSEALLENPALF--------SGEIKDLN----------------DLALEYMQFAKQYNAR--LAEIKAHLFKLLYTGLQIFT--DLRSKLGSA----KTYEEHLEVVIELKNKRADV-------PKEDKLGWYKRYQ 327          
BLAST of EWM23958.1 vs. NCBI_GenBank
Match: gi|675189981|ref|XP_008903875.1| (hypothetical protein PPTG_09840 [Phytophthora parasitica INRA-310] >gi|568096003|gb|ETN10758.1| hypothetical protein PPTG_09840 [Phytophthora parasitica INRA-310])

HSP 1 Score: 270.781 bits (691), Expect = 1.237e-82
Identity = 150/383 (39.16%), Postives = 218/383 (56.92%), Query Frame = 0
Query:  106 MMKQEHMHATRGEGHDLLLRLGNPRWIAAPMVQQSDLAFRTLVRRYGIDLAYTQMFHATNFANVKVYREENWDGLGNAPENAFDRPLIAQFAGDSADELVRAASLIQHEVDAVDLNLGCPQRIAKRGHYGAYLLEERNLVVRLLSHMVKHLAVPVTTKIRLLPNERDTLELVKAIEDAGVALLTIHGRTREQNKMSVGKADWAAINKIKCACHIPVVANGGVETYEDALACQSVTGADAVMSSEGLLENPSLFLPGSSLLVGGERSRMQSCEREVEAFALAHRQLNFAQEYLELAKKFWPREGVATVKGHLFKMLYHILEVPANYDLREKLGAKGNGIKQYEQVVQELLE--TRYSSIDVAIVLTKGAIVSPVSWYRRHREGH 486
            M +Q+     +  G+D    +G+P+ I APMV QS+LAFR L R+ G +  YT MFH+  FA    YRE+ ++       +  DRPL+ QF G+    ++ AA +++   DAVDLNLGCPQ IA++GHYG++L+ +++ V  ++  +   L +PVT KIR+ P++ +TLE    +++AG  LLT+HGRT+E NK +V + DW  I +IK    IPV+ANGG+ET+ED   C   TG D VMSSEGLLENP+LF   ++    GE +                  L  A++YLE A   +P      V+ HLFK+L+  L +  + DLR+ L A  +  +  E +V EL        S +      K    +  SWYRRHR+G 
Sbjct:    1 MAEQQPTTMVKLRGYDFYRAIGSPKHIVAPMVDQSELAFRMLCRKLGAECCYTPMFHSRLFAESAEYREKMFE------HHIQDRPLVVQFCGNDPKTVLAAAKMVEGHCDAVDLNLGCPQGIARKGHYGSFLMHDKDTVKAIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFAETNN--TPGEDTSF----------------LELAKQYLECA-TLYPPASDKIVRAHLFKILFQDLRM--HSDLRDALAAAKSQDEMVE-IVDELAMRLKEAQSENAGPEAKKVTYAAETSWYRRHRQGQ 355          
The following BLAST results are available for this feature:
BLAST of EWM23958.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105244|gb|EWM23958.1|0.000e+0100.00dihydrouridine synthase [Nannochloropsis gaditana][more]
gi|298715097|emb|CBJ27785.1|9.747e-9247.46dihydrouridine synthase [Ectocarpus siliculosus][more]
gi|1214706674|gb|OWZ18183.1|3.169e-8440.97TRNA-dihydrouridine synthase [Phytophthora megakar... [more]
gi|635369704|emb|CCI42174.1|7.801e-8440.71unnamed protein product [Albugo candida][more]
gi|568051514|gb|ETM48419.1|1.419e-8339.43hypothetical protein L914_07046 [Phytophthora para... [more]
gi|566025843|gb|ETI48754.1|2.849e-8339.43hypothetical protein F443_07263 [Phytophthora para... [more]
gi|570329513|gb|ETO77461.1|2.911e-8339.43hypothetical protein F444_07334 [Phytophthora para... [more]
gi|673049571|ref|XP_008878746.1|9.955e-8342.08hypothetical protein H310_13139 [Aphanomyces invad... [more]
gi|145551887|ref|XP_001461620.1|1.027e-8241.90hypothetical protein [Paramecium tetraurelia strai... [more]
gi|675189981|ref|XP_008903875.1|1.237e-8239.16hypothetical protein PPTG_09840 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6744rna6744Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications