EWM23955.1, cds6727 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|585105241|gb|EWM23955.1| (peptidyl-prolyl cis-trans isomerase 10 [Nannochloropsis gaditana]) HSP 1 Score: 341.273 bits (874), Expect = 5.998e-119 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFADALV 163
MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFADALV
Sbjct: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFADALV 163
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|298710490|emb|CBJ25554.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 241.121 bits (614), Expect = 2.763e-79 Identity = 111/160 (69.38%), Postives = 130/160 (81.25%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFAD 160
M+VTL TSLG IK+E++CD VPRT +NFLA ASG YD T FHRNI+ FMVQGGDP GTGKGGESIWGG DEFHP KHDRRG+VSMA++GP TN QFFITY HLNN YT+F ++IDG+DVLD +EKAPVGKK RP+T+++IK V IHANP A+
Sbjct: 1 MSVTLETSLGDIKIEVFCDTVPRTAENFLAHCASGYYDGTKFHRNIKGFMVQGGDPLGTGKGGESIWGGPFPDEFHPDNKHDRRGMVSMASKGPNTNKSQFFITYTRQPHLNNVYTVFGKVIDGLDVLDVIEKAPVGKKERPLTEIIIKHVTIHANPVAE 160
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|695425447|ref|XP_009529179.1| (hypothetical protein PHYSODRAFT_315734 [Phytophthora sojae] >gi|348675612|gb|EGZ15430.1| hypothetical protein PHYSODRAFT_315734 [Phytophthora sojae]) HSP 1 Score: 239.58 bits (610), Expect = 1.187e-78 Identity = 108/160 (67.50%), Postives = 130/160 (81.25%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFAD 160
M+VTLHT+LG IK+E+ CD PRT +NFLAL ASG YD T FHRN++ FMVQGGDPTGTGKGG+SIWGG ++DEFHP +H+ RGIVSMAN GP TN QFF+TY + HLNN YT+F ++IDGMD LDA+EK PV K+RP+ ++VIKSV IHANP AD
Sbjct: 1 MSVTLHTTLGDIKIEVCCDTAPRTAENFLALCASGAYDGTKFHRNMKGFMVQGGDPTGTGKGGQSIWGGTIDDEFHPQNRHNCRGIVSMANSGPNTNKQQFFVTYAKQPHLNNVYTVFGKVIDGMDTLDAMEKTPVDAKNRPLKEIVIKSVTIHANPIAD 160
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|673029024|ref|XP_008868473.1| (peptidyl-prolyl cis-trans isomerase-like 3 [Aphanomyces invadans] >gi|574476090|gb|ETW03089.1| peptidyl-prolyl cis-trans isomerase-like 3 [Aphanomyces invadans]) HSP 1 Score: 238.81 bits (608), Expect = 2.475e-78 Identity = 107/160 (66.88%), Postives = 130/160 (81.25%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFAD 160
M+VTLHTSLG IK+E++CD PRT +NFLAL AS +YDNT+FHRN++ FM+QGGDPTGTGKGGESIWGG ++DEFHP +H+ RGIVSMAN G TN QFFITY + HLNN YT+F ++IDG DVLDA+EKA V K RP+ D+V+ +V IHANP AD
Sbjct: 1 MSVTLHTSLGDIKMEVFCDTAPRTAENFLALCASNSYDNTVFHRNMKGFMIQGGDPTGTGKGGESIWGGAIDDEFHPQNRHNVRGIVSMANSGANTNKQQFFITYAKQPHLNNVYTVFGKVIDGFDVLDAMEKAQVDSKHRPLKDIVLNNVTIHANPIAD 160
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|301123243|ref|XP_002909348.1| (peptidyl-prolyl cis-trans isomerase 10 [Phytophthora infestans T30-4] >gi|262100110|gb|EEY58162.1| peptidyl-prolyl cis-trans isomerase 10 [Phytophthora infestans T30-4]) HSP 1 Score: 238.424 bits (607), Expect = 3.793e-78 Identity = 108/160 (67.50%), Postives = 129/160 (80.62%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFAD 160
M+VTLHT+LG IK+E+ CD PR +NFLAL ASG YD T FHRN++ FMVQGGDPTGTGKGG+SIWGG ++DEFHP +H+ RGIVSMAN GP TN QFFITYG+ HLNN YT+F ++IDGMD LDA+EK PV K+RP+ ++ IKSV IHANP AD
Sbjct: 1 MSVTLHTTLGDIKIEVCCDTAPRASENFLALCASGAYDGTKFHRNMKGFMVQGGDPTGTGKGGQSIWGGTIDDEFHPQNRHNCRGIVSMANSGPNTNKQQFFITYGKQPHLNNVYTVFGKIIDGMDTLDAIEKTPVDAKNRPLKEIAIKSVTIHANPIAD 160
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|1173940346|gb|OQR89794.1| (peptidyl-prolyl cis-trans isomerase 10 [Thraustotheca clavata]) HSP 1 Score: 238.039 bits (606), Expect = 5.158e-78 Identity = 107/159 (67.30%), Postives = 127/159 (79.87%), Query Frame = 0
Query: 2 AVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFAD 160
+VTLHTSLG IK+E++CD VP T +NFLAL AS YD T+FHRNI+ FM+QGGDPTGTGKGGESIWGG DEFHP +H+ RGIVSMAN GP TN QFFITY + HLNN YT+F ++IDG +VLDA+EK PV +K RP+ D+V+ SV IHANP AD
Sbjct: 4 SVTLHTSLGDIKIEVFCDTVPTTAENFLALCASNAYDKTIFHRNIKGFMIQGGDPTGTGKGGESIWGGKFNDEFHPQNRHNVRGIVSMANSGPNTNKQQFFITYAKQPHLNNVYTVFGKVIDGFEVLDAMEKTPVNEKHRPMKDIVLNSVTIHANPLAD 162
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|669143484|ref|XP_008607304.1| (peptidyl-prolyl cis-trans isomerase-like 3 [Saprolegnia diclina VS20] >gi|530741001|gb|EQC39243.1| peptidyl-prolyl cis-trans isomerase-like 3 [Saprolegnia diclina VS20]) HSP 1 Score: 236.884 bits (603), Expect = 1.122e-77 Identity = 106/160 (66.25%), Postives = 127/160 (79.38%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFAD 160
M+VTLHTSLG IK+E++CD VP T +NFLAL AS YD T FHRN++ FM+QGGDPTGTGKGGESIWGG DEFHP +H+ RGIVSMAN GP TN QFFITY + HLNN YT+F ++IDG DVLDA+EK PV KSRP+ ++V+ S+ IHANP A+
Sbjct: 1 MSVTLHTSLGDIKIEVFCDTVPTTAENFLALCASNAYDKTTFHRNMKGFMIQGGDPTGTGKGGESIWGGKFNDEFHPQNRHNARGIVSMANSGPNTNKQQFFITYAKQPHLNNVYTVFGKVIDGFDVLDAMEKTPVDAKSRPLKEIVLDSIAIHANPLAE 160
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|675211063|ref|XP_008914416.1| (peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica INRA-310] >gi|567946877|gb|ETK72678.1| peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica] >gi|567975585|gb|ETL26130.1| peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica] >gi|568005036|gb|ETL79342.1| peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica] >gi|568034939|gb|ETM32601.1| peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica] >gi|568085302|gb|ETN00210.1| peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica INRA-310] >gi|570313087|gb|ETO61035.1| peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica P1976] >gi|570936894|gb|ETP02151.1| peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica CJ01A1] >gi|570967210|gb|ETP30329.1| peptidyl-prolyl cis-trans isomerase-like 3 [Phytophthora parasitica P10297]) HSP 1 Score: 236.113 bits (601), Expect = 2.697e-77 Identity = 107/160 (66.88%), Postives = 129/160 (80.62%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFAD 160
M+VTLHT+LG IK+E+ CD PRT +NFLAL ASG Y T FHRN++ FMVQGGDPTGTGKGG+SIWGG ++DEFHP +H+ RGIVSMAN GP TN QFFITY + HLNN YT+F ++IDG+D LDA+EK PV K+RP+ ++VIKSV IHANP AD
Sbjct: 1 MSVTLHTTLGDIKIEVCCDTAPRTSENFLALCASGAYSGTKFHRNMKGFMVQGGDPTGTGKGGQSIWGGTIDDEFHPQNRHNCRGIVSMANSGPNTNKQQFFITYAKQPHLNNVYTVFGKVIDGLDTLDAIEKTPVDAKNRPLKEIVIKSVTIHANPIAD 160
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|813102752|ref|XP_012193917.1| (peptidyl-prolyl cis-trans isomerase-like 3 [Saprolegnia parasitica CBS 223.65] >gi|641541841|gb|KDO35586.1| peptidyl-prolyl cis-trans isomerase-like 3 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 235.728 bits (600), Expect = 4.133e-77 Identity = 105/160 (65.62%), Postives = 127/160 (79.38%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPVGKKSRPVTDLVIKSVQIHANPFAD 160
M+VTLHTSLG IK+E++CD VP T +NFLAL AS YD T FHRN++ FM+QGGDPTGTGKGGESIWGG DEFHP +H+ RGIVSMAN GP TN QFFITY + HLNN YT+F ++IDG DVLDA+EK PV KSRP+ ++++ S+ IHANP A+
Sbjct: 1 MSVTLHTSLGDIKIEVFCDTVPTTAENFLALCASNAYDKTTFHRNMKGFMIQGGDPTGTGKGGESIWGGKFNDEFHPQNRHNARGIVSMANSGPNTNKQQFFITYAKQPHLNNVYTVFGKVIDGFDVLDAMEKTPVDAKSRPLKEILLHSITIHANPLAE 160
BLAST of EWM23955.1 vs. NCBI_GenBank
Match: gi|1183419068|gb|ORY43428.1| (cyclophilin-like protein, partial [Rhizoclosmatium globosum]) HSP 1 Score: 233.032 bits (593), Expect = 3.996e-76 Identity = 107/160 (66.88%), Postives = 129/160 (80.62%), Query Frame = 0
Query: 1 MAVTLHTSLGSIKLELYCDLVPRTCKNFLALAASGTYDNTLFHRNIRDFMVQGGDPTGTGKGGESIWGGYLEDEFHPALKHDRRGIVSMANRGPGTNGCQFFITYGEHKHLNNKYTIFARLIDGMDVLDALEKAPV-GKKSRPVTDLVIKSVQIHANPFA 159
M+VTLHT LG +K+EL+C+ VPRT +NFLALAASG Y+N LFHRNI+ FM+Q GDPTGTGKGG+SIWG DE LKH+ RGIVSMAN+GP TN QFFITYG+H HL++KYT+F ++IDGMD LDALEK PV G +RP+ D+ IKS+ IHANP A
Sbjct: 1 MSVTLHTDLGDLKIELFCEAVPRTAENFLALAASGYYNNNLFHRNIKGFMIQTGDPTGTGKGGQSIWGAPFADEIKSTLKHNTRGIVSMANKGPDTNKSQFFITYGKHAHLDSKYTVFGKVIDGMDTLDALEKVPVEGGSNRPLQDIRIKSITIHANPLA 160 The following BLAST results are available for this feature:
BLAST of EWM23955.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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