EWM23957.1, cds6697 (CDS) Nannochloropsis gaditana

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|585105243|gb|EWM23957.1| (chloroplast light harvesting protein isoform 4 [Nannochloropsis gaditana])

HSP 1 Score: 444.891 bits (1143), Expect = 4.565e-158
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0

Query:    1 MRTTACLLAGLGLTQAFLAPTLPSARSFSRTAVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF 219
            MRTTACLLAGLGLTQAFLAPTLPSARSFSRTAVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF
Sbjct:    1 MRTTACLLAGLGLTQAFLAPTLPSARSFSRTAVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF 219          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|873220084|emb|CEM36363.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 253.062 bits (645), Expect = 3.010e-82
Identity = 126/186 (67.74%), Postives = 144/186 (77.42%), Query Frame = 0

Query:   19 APTLPSARSFSRTAVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQW 204
            +P L S +   RT  +MKLG++AQGL GSD+E+PEFDPLGFTNN   ETL+WYRAAELKHGRV MLAALGQ+VQ F+ LPD SGVF + D    A NKVV+ERP AAIQI LAIFAVE LG   QAKPGQAPGDL +DP  ++SDDPEI+   Q RELKNGRLAMI I  MLVQE ++G GVI QW
Sbjct:   28 SPLLKSPKRSLRTTPSMKLGTNAQGLIGSDLEWPEFDPLGFTNNISDETLEWYRAAELKHGRVCMLAALGQLVQSFWHLPDPSGVFDSTDSSFGAFNKVVSERPWAAIQILLAIFAVEVLGAKTQAKPGQAPGDLDFDPFKVRSDDPEIWEATQLRELKNGRLAMIGITAMLVQEAISGKGVIAQW 213          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|873235066|emb|CEM00977.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 191.045 bits (484), Expect = 1.264e-57
Identity = 115/232 (49.57%), Postives = 144/232 (62.07%), Query Frame = 0

Query:    1 MRTTACLLAGLGLTQAFLAPTLPSARSFSRTAVTMKLGSS-------AQGLAGSDIEFPEFDPLGFT-NNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLK-----SDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF 219
            M+  A +LA L +      P+ P++ S  R ++   L  S         GL GSDIE P FDP      + +PETL WYRAAELKHGR+ MLAALG   Q    LPD SGVFS   + I AL KV  ERP A IQ+ LAI A+E +   N+A    APGDLG+DPLNL+     + +PE + K+Q RELKNGRLAM+A AGML+Q+ LTG   +EQ + G I+PFGDG+G F
Sbjct:    1 MKAVAVILALLAVVAHAFVPSPPASGSSVRGSLRQSLSPSRLQAEGPPGGLVGSDIEAPNFDPWKLAAGDLEPETLSWYRAAELKHGRICMLAALGLTTQEVVQLPDPSGVFSE-TKGIPALVKVANERPGAIIQLLLAIGAIE-VAALNRAD-SAAPGDLGFDPLNLQQKLGLASNPEAFEKMQLRELKNGRLAMVATAGMLIQQFLTGQATLEQLLSGHISPFGDGQGVF 229          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|585102300|gb|EWM21948.1| (fucoxanthin chlorophyll a c binding protein [Nannochloropsis gaditana])

HSP 1 Score: 183.341 bits (464), Expect = 9.772e-55
Identity = 109/192 (56.77%), Postives = 134/192 (69.79%), Query Frame = 0

Query:   28 FSRTAVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF 219
            F RT   + +  S  G+ GSD+E PEFDPLG   N   ETL WYRAAELKHGRV MLA++G +VQ  Y LPD  G F A  +PI+AL KV +ERPLAA+QI +AI A+E LG   Q     APGDL +DPL LK +DPE  A++Q +ELKNGRLAM+A AG+  QE +TG G +EQ + G I+PFGDG+G F
Sbjct:   42 FRRTQGRVSMDIS--GIVGSDVEVPEFDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGLYHLPD--GPFEA-SKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKY--TAPGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQEYVTGQGPVEQLLSGHISPFGDGQGAF 226          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|553179865|ref|XP_005852776.1| (light-harvesting protein [Nannochloropsis gaditana CCMP526] >gi|422295759|gb|EKU23058.1| light-harvesting protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 182.956 bits (463), Expect = 1.260e-54
Identity = 109/192 (56.77%), Postives = 134/192 (69.79%), Query Frame = 0

Query:   28 FSRTAVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF 219
            F RT   + +  S  G+ GSD+E PEFDPLG   N   ETL WYRAAELKHGRV MLA++G +VQ  Y LPD  G F A  +PI+AL KV +ERPLAA+QI +AI A+E LG   Q     APGDL +DPL LK +DPE  A++Q +ELKNGRLAM+A AG+  QE +TG G +EQ + G I+PFGDG+G F
Sbjct:   29 FRRTQGRVSMDIS--GIVGSDVEVPEFDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGLYHLPD--GPFEA-SKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKY--TAPGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQEYVTGQGPVEQLLSGHISPFGDGQGAF 213          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|873232548|emb|CEM05081.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 181.8 bits (460), Expect = 3.971e-54
Identity = 103/191 (53.93%), Postives = 128/191 (67.02%), Query Frame = 0

Query:   22 LPSARSFSRTAVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPF 212
            L ++RS SRT       S A GL G+DI+ P FDPLG +     ETL WYRAAELKHGRVAMLAALG +VQ+ Y LPD+   F   + PI A+ K+ +ERPLA +QI  AI A+E LG   Q +     GDL WDPL +K +DPE + K+Q RELKNGRLAMI++ GM  QE LT  G I+Q + G++NPF
Sbjct:   35 LRASRSPSRTMQMALDPSFAGGLVGNDIDAPNFDPLGLSKTADDETLKWYRAAELKHGRVAMLAALGFLVQNIYQLPDSP--FQEAN-PINAVYKLWSERPLAIMQILTAIAAIEVLGNQVQLQTEDG-GDLKWDPLGIKPNDPEEFRKMQLRELKNGRLAMISVLGMTAQEALTDQGPIDQILTGNVNPF 221          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|299115217|emb|CBN74050.1| (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 180.644 bits (457), Expect = 1.494e-53
Identity = 99/182 (54.40%), Postives = 120/182 (65.93%), Query Frame = 0

Query:   23 PSARSFSRTAVTMKLGSSAQGLAGSDIEFP-EFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQ 203
            P AR+ S  AV         GL G+DIE    FDPLGF  N  PE + WYRAAELKHGR+ MLAA GQI QHF    D SG+F        A+ +V  +RPLA +QI LAIFAVE  G   Q +  +A GDLG+DPL LK  +PE + +VQ RELKNGRLAM AI GM+VQE++TG+GV+E+
Sbjct:   51 PPARAVSTNAV--------DGLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAAFGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPLAFVQIFLAIFAVEVYGNRKQEE-NEAGGDLGFDPLGLKPSNPESWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEK 223          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|585107120|gb|EWM25359.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 159.458 bits (402), Expect = 1.974e-44
Identity = 90/178 (50.56%), Postives = 116/178 (65.17%), Query Frame = 0

Query:   26 RSFSRTAVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQ 203
            R+ ++ A  +     A GL GSD+E   FDP    +   PE L WYR+AELKHGR+ MLAALG +VQ  Y LPD   VFS   + ++AL +V AERP A  QI +AI A+E  G    A  G+APGD G+DPLNLK    E + ++Q +E+KNGRLAM+ +AGML+QE LT  GV+EQ
Sbjct:  128 RAAAKPAAPLSNPDFAGGLIGSDVEAIRFDPWNLASERDPEGLAWYRSAELKHGRICMLAALGLLVQSSYHLPDE--VFS-NSKGLDALFQVSAERPQAIAQILIAIGAIEVAGL--AASEGKAPGDFGFDPLNLKPKTEEAFNELQLKEIKNGRLAMVGVAGMLIQETLTNQGVLEQ 300          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|585113162|gb|EWM30498.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 152.91 bits (385), Expect = 4.934e-43
Identity = 107/222 (48.20%), Postives = 134/222 (60.36%), Query Frame = 0

Query:    1 MRTTACLLAGLGLTQAFL--APTLPSARSFSRTAVTMKLGSSAQGLAGSDIEFP-EFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF 219
            M+T    LA LG++ AF+  AP +   RS  R AV          + GSD+E    FDPLG   +    +L   R  ELKHGRVAMLA LG +VQ FY LPD   VFS   RP+ AL +V +ERP+A  QI LAI A+E L    Q    +APGD+G+    +  DD E +A +Q +ELKNGRLAM+AI G  VQE LTG G IEQ ++G  +PFGDG+G F
Sbjct:    1 MKTAFAFLALLGVSTAFMPTAPRMTRGRSV-RMAVN--------EMIGSDVETNGVFDPLGLAKDEA--SLYRSRLIELKHGRVAMLACLGTLVQSFYHLPDE--VFS-NPRPLAALAQVYSERPVAFWQIFLAIGAIE-LTIGKQDTANRAPGDVGFGAAFI-PDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPFGDGQGAF 206          

BLAST of EWM23957.1 vs. NCBI_GenBank
Match: gi|873230095|emb|CEM11606.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 150.599 bits (379), Expect = 5.288e-42
Identity = 102/225 (45.33%), Postives = 134/225 (59.56%), Query Frame = 0

Query:    1 MRTTACLLAGLGL-TQAFLAPT----LPSARSFSRTAVTMKLGSSAQGLAGSDIEFP-EFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQWVKGDINPFGDGRGFF 219
            M++  C +A L +   AF+ PT       +R  +R A TM    +   LAG+D+E    +DPLG + N   + L  YRAAELKHGRV M+A LG IVQ ++ LPD   VF+   RP+EA+ +V  +RP A IQI LAI A E    F +  P   PG L       +  D   + ++Q +ELKNGRLAMI I+GMLVQE LTG G +EQ   G I+PFGDG+G+F
Sbjct:    1 MKSVICAIALLVVGAHAFVPPTGFQGALRSRGAARPATTM---GAVDQLAGADVETGGVWDPLGLSQNE--DALSLYRAAELKHGRVCMMAVLGVIVQTYFQLPDP--VFN-NPRPLEAIVQVWQQRPEAIIQILLAIGATELY--FLRQSPEDPPGSLQNFGAAFRPRDEAKFEELQRKELKNGRLAMIGISGMLVQEALTGQGPLEQIQVGHISPFGDGQGYF 215