EWM23952.1, cds6688 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|585105238|gb|EWM23952.1| (CCT domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1132.86 bits (2929), Expect = 0.000e+0 Identity = 575/575 (100.00%), Postives = 575/575 (100.00%), Query Frame = 0
Query: 1 MSAVAMSAQNRSKIGSGQDTLDGEFLGLSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASELEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSLDLELLMDDLDMNFLQLSSGVMGMGGALGGDGEHCQFDMDDMASLIAGDQAGQGSVGAGSFMEEELLSSMVGVLGRSMSPSHSASFGLSPFAEESGSGGLPAFLVAVKDEAPPTLVGEGGKGAPVMRGKAAAASGAARNNKPPSGPPSASAASSTLQQASLSVGVPPPRGSRRGSHPGSRPSAAAAAASVGAALASKTGGPGASKAESQADSGPSAGSKSNGRASPAVSALASDALGPQSQPGAINPSEASEKAAAAAAASSLMPVLQGNSPHSSPTGSINISTGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLTSREGAMTPGGGQENSSCLASGTAPSDSLATEGLHMGVGEGAILPGRGRKGSSSDLLPGLLLGKDELVLGGHEEDGIAVGVEELEDLLAPLDGL 575
MSAVAMSAQNRSKIGSGQDTLDGEFLGLSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASELEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSLDLELLMDDLDMNFLQLSSGVMGMGGALGGDGEHCQFDMDDMASLIAGDQAGQGSVGAGSFMEEELLSSMVGVLGRSMSPSHSASFGLSPFAEESGSGGLPAFLVAVKDEAPPTLVGEGGKGAPVMRGKAAAASGAARNNKPPSGPPSASAASSTLQQASLSVGVPPPRGSRRGSHPGSRPSAAAAAASVGAALASKTGGPGASKAESQADSGPSAGSKSNGRASPAVSALASDALGPQSQPGAINPSEASEKAAAAAAASSLMPVLQGNSPHSSPTGSINISTGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLTSREGAMTPGGGQENSSCLASGTAPSDSLATEGLHMGVGEGAILPGRGRKGSSSDLLPGLLLGKDELVLGGHEEDGIAVGVEELEDLLAPLDGL
Sbjct: 1 MSAVAMSAQNRSKIGSGQDTLDGEFLGLSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASELEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSLDLELLMDDLDMNFLQLSSGVMGMGGALGGDGEHCQFDMDDMASLIAGDQAGQGSVGAGSFMEEELLSSMVGVLGRSMSPSHSASFGLSPFAEESGSGGLPAFLVAVKDEAPPTLVGEGGKGAPVMRGKAAAASGAARNNKPPSGPPSASAASSTLQQASLSVGVPPPRGSRRGSHPGSRPSAAAAAASVGAALASKTGGPGASKAESQADSGPSAGSKSNGRASPAVSALASDALGPQSQPGAINPSEASEKAAAAAAASSLMPVLQGNSPHSSPTGSINISTGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLTSREGAMTPGGGQENSSCLASGTAPSDSLATEGLHMGVGEGAILPGRGRKGSSSDLLPGLLLGKDELVLGGHEEDGIAVGVEELEDLLAPLDGL 575
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|299473410|emb|CBN77808.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.561 bits (314), Expect = 1.474e-26 Identity = 65/109 (59.63%), Postives = 84/109 (77.06%), Query Frame = 0
Query: 28 LSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASELEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSLDLELLMDDLDMNFLQL 136
LSH+PP FTP SYE SHM KR R+GSISGRLRSAS+LEEKGLID+ QKGVLK+LI+SGD L LD + + GD S+L +L+++G+L+ R S D L+D+LD ++L
Sbjct: 44 LSHTPPNFTPGSYEVSHM-KRARAGSISGRLRSASDLEEKGLIDKSQKGVLKDLIISGDSQLQTALDLY-DNGDASQLEALMENGLLDRRESFD---LLDNLDFGIMEL 147 HSP 2 Score: 107.457 bits (267), Expect = 1.045e-20 Identity = 43/63 (68.25%), Postives = 56/63 (88.89%), Query Frame = 0
Query: 416 KHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEV 478
K ++GAYSPE+RR R+E+F +K++ R+W + VKYDVRKNFAD+R+RVKGRFVKKEDEA+L EV
Sbjct: 649 KKFVGAYSPEARRQRIERFLDKREKRVWTKMVKYDVRKNFADTRMRVKGRFVKKEDEALLREV 711
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|1032150803|gb|OAO14498.1| (CCT motif containing protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 109.768 bits (273), Expect = 1.379e-23 Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0
Query: 395 PTGSINISTGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTL 481
P G +I T A ++ K YIG YSPESR+ R+++F+EK+K R+W +KVKYDVRKNFADSR+RVKGRFVKKEDE +L E+ L
Sbjct: 157 PPGLTSIDTQA-------ESQKKYIGIYSPESRKKRVQRFFEKRKQRVWTKKVKYDVRKNFADSRLRVKGRFVKKEDEELLRELMNL 236
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|855303174|ref|XP_012894668.1| (uncharacterized protein [Blastocystis hominis] >gi|300175309|emb|CBK20620.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 108.997 bits (271), Expect = 4.872e-23 Identity = 46/70 (65.71%), Postives = 59/70 (84.29%), Query Frame = 0
Query: 413 DANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 482
+ K YIG YSPE+R+ R+++F+EK+K R+W +KVKYDVRKNFADSR+RVKGRFVKKEDE +L E+ LT
Sbjct: 197 ETQKKYIGMYSPEARKKRVQRFFEKRKQRVWTKKVKYDVRKNFADSRLRVKGRFVKKEDEELLRELMNLT 266
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|1210524953|dbj|GAX16145.1| (hypothetical protein FisN_3Hh374 [Fistulifera solaris]) HSP 1 Score: 111.694 bits (278), Expect = 1.821e-22 Identity = 63/116 (54.31%), Postives = 82/116 (70.69%), Query Frame = 0
Query: 26 LGLSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASE-LEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSLDLELLMDDLDMNFLQLSSGV 140
L LSH+PP SSYE SH KR R+GS+SGRLRSASE LE KGL+DR KG+L++LI+ GDE L +D F E GD S+L +++SG L+ R D++LL DLD +FL +S G+
Sbjct: 114 LPLSHTPPNMA-SSYEVSHFGKRARAGSVSGRLRSASEYLERKGLLDRNTKGILQDLIIIGDEELQSAID-FYEAGDPSKLEEMIQSGALQNRLPNDIDLL-GDLDFDFLTMSDGI 226 HSP 2 Score: 102.834 bits (255), Expect = 1.865e-19 Identity = 40/65 (61.54%), Postives = 58/65 (89.23%), Query Frame = 0
Query: 418 YIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 482
++GAYSP+SRR+R+++F +K+ +R+W + VKYDVRKNFA+SR+RVKGRFVKKEDE ++ E+ +LT
Sbjct: 463 WVGAYSPDSRRVRIDRFMQKRNHRVWAKTVKYDVRKNFANSRLRVKGRFVKKEDEVLMRELMSLT 527
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|673015400|ref|XP_008861661.1| (hypothetical protein H310_00600 [Aphanomyces invadans] >gi|574483259|gb|ETW10250.1| hypothetical protein H310_00600 [Aphanomyces invadans]) HSP 1 Score: 109.383 bits (272), Expect = 2.282e-22 Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 0
Query: 396 TGSINISTGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 482
+G++N S G EK+ A ++GAYSP+SRR R+EKF +K++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct: 276 SGTLNTSAGGLSDAEKKAA---FVGAYSPDSRRKRVEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 359 HSP 2 Score: 95.5153 bits (236), Expect = 1.149e-17 Identity = 58/114 (50.88%), Postives = 74/114 (64.91%), Query Frame = 0
Query: 7 SAQNRSKIGSGQDTLDGEFLGLSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASELEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSL 120
++ + IG D L G ++H+PP F+P S KR RSGSISGRL SAS+LEEKG IDR QKGVLK+LI+SGDE L L+ F E+GD + L +LL SG L + S+
Sbjct: 33 TSTRKESIGWMSDDLMGM---ITHTPPAFSPGSLTLPST-KRNRSGSISGRLLSASDLEEKGFIDRYQKGVLKDLIISGDEKLQKALETF-EQGDPTALEALLDSGALNRKSSV 141
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|1210531078|dbj|GAX10179.1| (hypothetical protein FisN_3Lh374 [Fistulifera solaris]) HSP 1 Score: 110.153 bits (274), Expect = 7.468e-22 Identity = 63/116 (54.31%), Postives = 82/116 (70.69%), Query Frame = 0
Query: 26 LGLSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASE-LEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSLDLELLMDDLDMNFLQLSSGV 140
L LSH+PP SSYE SH KR R+GS+SGRLRSASE LE KGL+DR KG+L++LI+ GDE L +D F E GD S+L +++SG L+ R D++LL DLD +FL +S G+
Sbjct: 116 LPLSHTPPSMA-SSYEISHFGKRARAGSVSGRLRSASEYLERKGLLDRNTKGILQDLIIIGDEELQSAID-FYEAGDPSKLEEMIQSGALQNRLPNDIDLL-GDLDFDFLTMSDGI 228 HSP 2 Score: 103.99 bits (258), Expect = 7.676e-20 Identity = 41/65 (63.08%), Postives = 58/65 (89.23%), Query Frame = 0
Query: 418 YIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 482
++GAYSP+SRR+R+E+F +K+ +R+W + VKYDVRKNFA+SR+RVKGRFVKKEDE ++ E+ +LT
Sbjct: 464 WVGAYSPDSRRVRIERFMQKRNHRVWAKTVKYDVRKNFANSRLRVKGRFVKKEDEVLMRELMSLT 528
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|698779157|ref|XP_009822622.1| (hypothetical protein H257_01227 [Aphanomyces astaci] >gi|574122283|gb|ETV87759.1| hypothetical protein H257_01227 [Aphanomyces astaci]) HSP 1 Score: 107.457 bits (267), Expect = 8.554e-22 Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 0
Query: 396 TGSINISTGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 482
+G++N T AGG + D ++GAYSP+SRR R+EKF +K++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct: 272 SGTLN--TTAGGLSDA-DKKAAFVGAYSPDSRRKRVEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 355 HSP 2 Score: 94.7449 bits (234), Expect = 1.570e-17 Identity = 58/114 (50.88%), Postives = 74/114 (64.91%), Query Frame = 0
Query: 7 SAQNRSKIGSGQDTLDGEFLGLSHSPPQFTPSSYEASHMQKRIRSGSISGRLRSASELEEKGLIDRMQKGVLKNLIMSGDEHLLPVLDKFREEGDTSELRSLLKSGVLEGRPSL 120
++ + IG D L G ++H+PP F+P S KR RSGSISGRL SAS+LEEKG IDR QKGVLK+LI+SGDE L L+ F E+GD + L +LL SG L + S+
Sbjct: 33 TSARKESIGWMSDDLMGM---ITHTPPAFSPGSLTLPST-KRNRSGSISGRLLSASDLEEKGFIDRYQKGVLKDLIISGDEKLQKALETF-EQGDPTALEALLDSGALNRKSSV 141
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|950892360|ref|XP_014527847.1| (hypothetical protein JH06_2099 [Blastocystis sp. subtype 4] >gi|902862458|gb|KNB44404.1| hypothetical protein JH06_2099 [Blastocystis sp. subtype 4]) HSP 1 Score: 107.071 bits (266), Expect = 1.310e-21 Identity = 46/80 (57.50%), Postives = 62/80 (77.50%), Query Frame = 0
Query: 402 STGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTL 481
S G + ++ K +IG YSPE+R+ R+++F+EK+K R+W +KVKYDVRKNFADSR+RVKGRFVKKEDE +L E+ L
Sbjct: 282 SVGLSPTSPQLESQKKFIGIYSPEARKKRVQRFFEKRKQRVWTKKVKYDVRKNFADSRLRVKGRFVKKEDEELLRELMNL 361
BLAST of EWM23952.1 vs. NCBI_GenBank
Match: gi|695451307|ref|XP_009535696.1| (hypothetical protein PHYSODRAFT_288671 [Phytophthora sojae] >gi|348669240|gb|EGZ09063.1| hypothetical protein PHYSODRAFT_288671 [Phytophthora sojae]) HSP 1 Score: 104.76 bits (260), Expect = 1.938e-21 Identity = 47/86 (54.65%), Postives = 66/86 (76.74%), Query Frame = 0
Query: 397 GSINISTGAGGAEEKRDANKHYIGAYSPESRRLRLEKFWEKKKNRIWDRKVKYDVRKNFADSRVRVKGRFVKKEDEAILIEVNTLT 482
G I+ + G G ++ +++GAYSP+SRR R+EKF +K++ R+W ++VKYDVRKNFADSR+RVKGRFVKKEDE +L E+ + T
Sbjct: 193 GGIDATKGKDGQKQ------NFVGAYSPDSRRKRIEKFLDKRQKRVWRKEVKYDVRKNFADSRLRVKGRFVKKEDEQLLRELLSFT 272 The following BLAST results are available for this feature:
BLAST of EWM23952.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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