EWM23950.1, cds6686 (CDS) Nannochloropsis gaditana

Overview
NameEWM23950.1
Unique Namecds6686
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:300708..300950 +
Alignment locationCM002469.1:301013..301324 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23950.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100027g8.128.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:300708..300950 +
CM002469.1supercontigCM002469.1:301013..301324 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23950.1 vs. NCBI_GenBank
Match: gi|585105236|gb|EWM23950.1| (hypothetical protein Naga_100027g8 [Nannochloropsis gaditana])

HSP 1 Score: 381.719 bits (979), Expect = 3.586e-134
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 
Query:    1 MGDEPMKLQLLSNSNGVLATELVGVDDDYQTFSYAYKFTTNQGGFLCRRYDVFDAVGLRCCDVRWALGKLRIVMLPDGYVTEKCKPSTEWLGKHDISEWAPASRDFQKQWQQMVKDELLSCRKDLLANTLHHFRDLCKDNPDTKEALRDLVLVDDEDVDSVVNNFAGEFKRTKLTEKIWKSVKL 184
            MGDEPMKLQLLSNSNGVLATELVGVDDDYQTFSYAYKFTTNQGGFLCRRYDVFDAVGLRCCDVRWALGKLRIVMLPDGYVTEKCKPSTEWLGKHDISEWAPASRDFQKQWQQMVKDELLSCRKDLLANTLHHFRDLCKDNPDTKEALRDLVLVDDEDVDSVVNNFAGEFKRTKLTEKIWKSVKL
Sbjct:    1 MGDEPMKLQLLSNSNGVLATELVGVDDDYQTFSYAYKFTTNQGGFLCRRYDVFDAVGLRCCDVRWALGKLRIVMLPDGYVTEKCKPSTEWLGKHDISEWAPASRDFQKQWQQMVKDELLSCRKDLLANTLHHFRDLCKDNPDTKEALRDLVLVDDEDVDSVVNNFAGEFKRTKLTEKIWKSVKL 184
The following BLAST results are available for this feature:
BLAST of EWM23950.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105236|gb|EWM23950.1|3.586e-134100.00hypothetical protein Naga_100027g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6702rna6702Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications