EWM24032.1, cds6679 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|585105319|gb|EWM24032.1| (Casein kinase II, regulatory subunit, alpha-helical [Nannochloropsis gaditana]) HSP 1 Score: 1089.72 bits (2817), Expect = 0.000e+0 Identity = 540/540 (100.00%), Postives = 540/540 (100.00%), Query Frame = 0
Query: 1 MRRYGDSTRNVGVGKEEERGRERSKELEHQDGSSHPLALTSTNSTSTPTSSSSNGKGNNNAHATKGPQSSGGGKNEEARLSRNDGGESCSSGSCSTAATGEATTLSLPTVVSGSVPLPAGGRTCSGQISPGTSCVKEGRSGGGAESGRTGCERREQGPTTRGEEWAARNVSTPIDAERAGLRAKGGGRMVSGGTGCSGERPHGPGKDREECERLQQEELQRRVPIPPPSRSETTPPAPTGWRGSKEQKSEMEDLSRSDEEEEEEEEEVEEEEEEEEEDEEEEEEEEEEEEEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAARRRENEERERRAGRGAGGGGGERGEGRAPLSSTAIMRRVRQMVRDGRDGRQGR 540
MRRYGDSTRNVGVGKEEERGRERSKELEHQDGSSHPLALTSTNSTSTPTSSSSNGKGNNNAHATKGPQSSGGGKNEEARLSRNDGGESCSSGSCSTAATGEATTLSLPTVVSGSVPLPAGGRTCSGQISPGTSCVKEGRSGGGAESGRTGCERREQGPTTRGEEWAARNVSTPIDAERAGLRAKGGGRMVSGGTGCSGERPHGPGKDREECERLQQEELQRRVPIPPPSRSETTPPAPTGWRGSKEQKSEMEDLSRSDEEEEEEEEEVEEEEEEEEEDEEEEEEEEEEEEEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAARRRENEERERRAGRGAGGGGGERGEGRAPLSSTAIMRRVRQMVRDGRDGRQGR
Sbjct: 1 MRRYGDSTRNVGVGKEEERGRERSKELEHQDGSSHPLALTSTNSTSTPTSSSSNGKGNNNAHATKGPQSSGGGKNEEARLSRNDGGESCSSGSCSTAATGEATTLSLPTVVSGSVPLPAGGRTCSGQISPGTSCVKEGRSGGGAESGRTGCERREQGPTTRGEEWAARNVSTPIDAERAGLRAKGGGRMVSGGTGCSGERPHGPGKDREECERLQQEELQRRVPIPPPSRSETTPPAPTGWRGSKEQKSEMEDLSRSDEEEEEEEEEVEEEEEEEEEDEEEEEEEEEEEEEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAARRRENEERERRAGRGAGGGGGERGEGRAPLSSTAIMRRVRQMVRDGRDGRQGR 540
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|1072224880|gb|OEU09629.1| (casein kinase 2 beta chain, CK2B [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 311.997 bits (798), Expect = 1.652e-100 Identity = 136/197 (69.04%), Postives = 168/197 (85.28%), Query Frame = 0
Query: 290 EEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYT 485
+E+ SW++W+ SL+GNEF CEVDE+YIQDDFNLTGLSSLVPYY+YALDMVLDVE+P+E S+TEEQ E+VE AAEMLYGLIHARYI+T+RG+HAM EKY+++ FGRCPR C QPVLP+GL+D PR TVNVFCPRC +F P+STR A +DGAYFGTTF HL+L+THP+ IP +Q+YVPR+YGFK++ S +Y
Sbjct: 5 DEDGSWITWFCSLRGNEFFCEVDEDYIQDDFNLTGLSSLVPYYEYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRAAAFGRCPRVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPTKPQQTYVPRVYGFKVHKTSLFYI 201
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|676393095|ref|XP_009039825.1| (hypothetical protein AURANDRAFT_54649 [Aureococcus anophagefferens] >gi|323449556|gb|EGB05443.1| hypothetical protein AURANDRAFT_54649 [Aureococcus anophagefferens]) HSP 1 Score: 308.531 bits (789), Expect = 1.894e-98 Identity = 138/199 (69.35%), Postives = 166/199 (83.42%), Query Frame = 0
Query: 290 EEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAA 487
+EE SW++W++SL+GNEF CEVDEEYIQDDFNLTGLSSLVPYYDYALDM+LDVE+ IE S+TEEQ ELVE AAEMLYGLIHARY++T+RG+ AM EKY S+ FGRCPR C QP LP+G +D PR TV+VFCP CRD+F PRS+R A++DGAYFGTTF HLFL+T PE IP QS+VPR++GF+I+ S Y+T A
Sbjct: 44 DEESSWIAWFLSLRGNEFFCEVDEEYIQDDFNLTGLSSLVPYYDYALDMILDVEMAIEESLTEEQQELVESAAEMLYGLIHARYVITNRGMQAMYEKYASASFGRCPRAFCCGQPALPVGRSDLPRNYTVHVFCPMCRDIFTPRSSRSASIDGAYFGTTFPHLFLMTFPELIPQHGVQSFVPRVFGFRIHKASPYHTTA 242
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|224011944|ref|XP_002294625.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220969645|gb|EED87985.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 300.827 bits (769), Expect = 1.672e-96 Identity = 135/190 (71.05%), Postives = 160/190 (84.21%), Query Frame = 0
Query: 290 EEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKIN 478
+E+ SW++W+ L+GNEF CEVDE+YIQDDFNLTGL+ LVPYYDYALDMVLDVE+P+E S+TEEQ E+VE AAEMLYGLIHARYI+T+RG+HAM EKY+S+ FGRCP C QPVLP+GL+D PR TVNVFCPRC +F P+STR A +DGAYFGTTF HL+L+THPE IP Q YVPR+YGFKIN
Sbjct: 17 DEDGSWIAWFCGLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPEMIPVRPSQQYVPRVYGFKIN 206
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|1173945749|gb|OQR94342.1| (casein kinase II subunit beta [Achlya hypogyna]) HSP 1 Score: 302.753 bits (774), Expect = 6.735e-96 Identity = 135/210 (64.29%), Postives = 166/210 (79.05%), Query Frame = 0
Query: 293 ISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAARRRENEERERRAGR 501
+SW+SW+ SL+GNEF CE+DEEYI DDFN+TGLSS+VPYYDYA+DM+LDVE P+E S+T+ Q E+VE AAEMLYGLIHARYI+T+RG+ AM EKY++ FGRC R C QPVLP+G +D PR +TVN+FCPRCRDVF P+S R +DG+YFGTTF HLFLLTHP +P Q YVPRI+G+KINA S YY R ++N+ R GR
Sbjct: 81 LSWISWFCSLRGNEFFCEIDEEYIIDDFNMTGLSSIVPYYDYAMDMILDVETPLEESLTDIQQEMVESAAEMLYGLIHARYIVTTRGMAAMLEKYQNVDFGRCHRVHCQGQPVLPVGQSDVPRHTTVNIFCPRCRDVFFPKSQRQGNIDGSYFGTTFPHLFLLTHPSLVPSPPAQVYVPRIFGYKINAASEYYLGKREKDNDRNGHRRGR 290
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|669141820|ref|XP_008606472.1| (casein kinase II subunit beta [Saprolegnia diclina VS20] >gi|530741756|gb|EQC39998.1| casein kinase II subunit beta [Saprolegnia diclina VS20]) HSP 1 Score: 297.36 bits (760), Expect = 6.865e-94 Identity = 133/210 (63.33%), Postives = 164/210 (78.10%), Query Frame = 0
Query: 293 ISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAARRRENEERERRAGR 501
+SW+SW+ SL+GNEF CEVDE+YI DDFN+TGLSS+VPYYDYA+DM+LDVE P E S+T+ Q E+VE AAEMLYGLIHARYI+T+RG+ AM EKY++ FGRC R C QPVLP+G +D PR +TVN+FCPRCRD+F P+S R DG+YFGTTF HLFLLTHP +P Q+YVPRI+G+KI+ S YY R +EN+ R GR
Sbjct: 75 LSWISWFCSLRGNEFFCEVDEDYIIDDFNMTGLSSIVPYYDYAMDMILDVETPHEDSLTDIQQEMVESAAEMLYGLIHARYIVTTRGMAAMLEKYQNVDFGRCHRVHCQGQPVLPVGQSDVPRHTTVNIFCPRCRDIFFPKSQRQGNQDGSYFGTTFPHLFLLTHPSIVPSPPSQAYVPRIFGYKIHHTSEYYLGKREKENDRNGHRRGR 284
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|299472384|emb|CBN77572.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 297.36 bits (760), Expect = 2.836e-93 Identity = 138/243 (56.79%), Postives = 176/243 (72.43%), Query Frame = 0
Query: 243 GSKEQKSEMEDLSRSDEEEEEEEEEVEEEEEEEEEDEEEEEEEEEEEEEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPI-ESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYY 484
G+K K E E+ SDE + ++E+ E DE+ +W+SW+V+L+GNEF CEVDE+YIQDDFNLTGLS++VPYY+YALDM+LDVE+P +++TEEQ E+VE AAE+LYGLIHARYILTSRG+ M +K++ FGRCPR C Q VLP GL+D PR TV V+CP+C+D+F P+STR A +DGAYFGTTF+HLFLL HPE IP Q+Y RIYGFKI+ S Y+
Sbjct: 77 GAKTGKGEEEEGGESDEPDLTASADLEDSSELSASDEDS------------TWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPAGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKFQVGAFGRCPRVYCQGQNVLPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYH 307
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|971516984|dbj|GAQ81209.1| (casein kinase II subunit beta [Klebsormidium nitens]) HSP 1 Score: 294.278 bits (752), Expect = 1.092e-92 Identity = 129/210 (61.43%), Postives = 163/210 (77.62%), Query Frame = 0
Query: 271 EEEEEEEDEEEEEEEEEEEEEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIESM-TEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINA 479
++ E+ + + EE + +EE+ SW++W+ SLKGNEF CEVD+EYIQDDFNL+GLSS VPYYDYALD++LDVE P + M TEEQHE+VE AAEMLYGLIH RYILT+RG+ AM EKYK+ FGRCPR C QP LP+G +D PR STV ++CP+C D++ PRS +DGAYFGTTF HLFL+T+ PP QSYVPRI+GFK+++
Sbjct: 75 DDGEDSDTDSEESDVSGSDEEDTSWIAWFCSLKGNEFFCEVDDEYIQDDFNLSGLSSQVPYYDYALDLILDVESPNDDMLTEEQHEMVESAAEMLYGLIHVRYILTTRGMSAMLEKYKNVDFGRCPRVYCSGQPCLPMGQSDIPRTSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYSYIKPPKPTQSYVPRIFGFKLHS 284
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|813170593|ref|XP_012204052.1| (hypothetical protein SPRG_09464 [Saprolegnia parasitica CBS 223.65] >gi|641531112|gb|KDO25201.1| hypothetical protein SPRG_09464 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 293.893 bits (751), Expect = 1.549e-92 Identity = 131/210 (62.38%), Postives = 163/210 (77.62%), Query Frame = 0
Query: 293 ISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAARRRENEERERRAGR 501
+SW+SW+ SL+GNEF CEVDE+YI DDFN+TGLSS+VPYYDYA+DM+LDVE P E S+T+ Q E+VE AAEMLYGLIHAR+I+T+RG+ AM EKY++ FGRC R C QPVLP+G +D PR +TVN+FCPRCRD+F P+S R DG+YFGTTF HLFLL HP +P Q+YVPRI+G+KI+ S YY R +EN+ R GR
Sbjct: 75 LSWISWFCSLRGNEFFCEVDEDYIIDDFNMTGLSSIVPYYDYAMDMILDVETPHEDSLTDIQQEMVESAAEMLYGLIHARFIVTTRGMAAMLEKYQNVEFGRCHRVHCQGQPVLPVGQSDVPRHTTVNIFCPRCRDIFFPKSQRQGNQDGSYFGTTFPHLFLLAHPSIVPSPPSQAYVPRIFGYKIHHTSEYYLGKREKENDRNGHRRGR 284
BLAST of EWM24032.1 vs. NCBI_GenBank
Match: gi|567997841|gb|ETL47920.1| (hypothetical protein L916_02398, partial [Phytophthora parasitica]) HSP 1 Score: 290.812 bits (743), Expect = 3.865e-91 Identity = 126/214 (58.88%), Postives = 169/214 (78.97%), Query Frame = 0
Query: 289 EEEEISWVSWYVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIES-MTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAARRRENEERERRAGR 501
+EEE SW++W+ SL+ N F+CEVDE+YI+DDFNLTGLSS+VPYYDYALD++LD+E P +S +T+ Q E++E AAEMLYGLIHARYILT++G+ AM +KY++ FGRC R C QPVLP+G +D PR +TVNVFCP+CRD+F P+S R +DGAYFG TF H+FL+THP + P Q+YVPR++G+KI++ S YYT +++ + RER R
Sbjct: 70 DEEETSWIAWFCSLRENSFLCEVDEDYIEDDFNLTGLSSIVPYYDYALDIILDIETPNDSTLTQIQQEMIESAAEMLYGLIHARYILTTKGMAAMLDKYQNVDFGRCHRVYCQGQPVLPVGQSDVPRHTTVNVFCPKCRDIFFPKSQRAGQIDGAYFGATFPHVFLMTHPHLVVPPPTQTYVPRVFGYKIHSSSEYYT-GKKKSSSGREREKNR 282 The following BLAST results are available for this feature:
BLAST of EWM24032.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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