EWM24019.1, cds6669 (CDS) Nannochloropsis gaditana

Overview
NameEWM24019.1
Unique Namecds6669
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:254172..254456 -
Alignment locationCM002469.1:253295..254053 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24019.1
Productribonuclease h2 subunit a
Orig transcript idgnl|cribi|Naga_100040g36.2017.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:254172..254456 -
CM002469.1supercontigCM002469.1:253295..254053 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0004523RNA-DNA hybrid ribonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0016070RNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR001352RNase_HII/HIII
IPR004649RNase_H2_suA
IPR012337RNaseH-like_dom
IPR023160RNase_HII_hlx-loop-hlx_cap_dom
IPR024567RNase_HII/HIII_dom
Homology
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|585105306|gb|EWM24019.1| (ribonuclease h2 subunit a [Nannochloropsis gaditana])

HSP 1 Score: 719.924 bits (1857), Expect = 0.000e+0
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0
Query:    1 MAADDTPSTSTNNGTLNAENRSDEPICLTRAEQQEAEDDAKGFPKNRFKHGINKLWHIPPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
            MAADDTPSTSTNNGTLNAENRSDEPICLTRAEQQEAEDDAKGFPKNRFKHGINKLWHIPPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF
Sbjct:    1 MAADDTPSTSTNNGTLNAENRSDEPICLTRAEQQEAEDDAKGFPKNRFKHGINKLWHIPPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|299473412|emb|CBN77810.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 271.166 bits (692), Expect = 6.176e-86
Identity = 160/298 (53.69%), Postives = 190/298 (63.76%), Query Frame = 0
Query:   58 IPP---ALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEE---DFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVG-VEWEEEEENGGLPAGTASIEAF-VKPKADGPKKARKRAKYFQQRGMETVGDF 347
            IPP    L     V LGIDEAGRGPVLGPM Y AA+W   +D  M A GFDDSKAL    R  LF R+ RT E VGWV+  I A E++ KM  + P SLN ISHD+AA+++  V A GV VT+V+VDTVGDP  YQ KLE  FG     I F VAKKADSLYKT SAASI AKVTRDR +  W W E   DF +     +GSGYPGD +C +WL  N +PVFGFP + RFSW TT+E+++      V+WEEE +     AG  SI +F V+PK    KKA  RA  F +RG+E V  F
Sbjct:   37 IPPRCRGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPE-VGWVLRLISARELSDKMCRKVPYSLNVISHDAAAELIRAVQARGVKVTQVYVDTVGDPAFYQSKLEKEFGK---GIKFVVAKKADSLYKTASAASIVAKVTRDRIVEGWQWSEPNLDFSE--DRKYGSGYPGDEKCKKWLESNVDPVFGFPDICRFSWGTTKEILKGPTRKRVDWEEEPDEEA--AGMNSIASFMVQPK----KKA--RANLFVKRGLELVDTF 320          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|568023979|gb|ETL98023.1| (ribonuclease HII [Phytophthora parasitica])

HSP 1 Score: 266.544 bits (680), Expect = 2.825e-84
Identity = 146/291 (50.17%), Postives = 188/291 (64.60%), Query Frame = 0
Query:   59 PPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEW--EEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
            P +   G PV LGIDEAGRGPV+GPMVY AA+W V ++DAM A+GFDDSKAL  ++R  LF++M  T E +GW++  I A E++ KM  R+ ++LN++S D+A  +++ V  +G  V +VFVDTVGDP  YQ  L     H    I F V KKADSL+K VSAASIAAKVTRDR I DW+WE    + L TDFGSGYP D +   WL  + + VF FP+++RFSW T    +EK  V VEW  E++ E    P GT SI +F+       K A  RA +F QR M+ V DF
Sbjct:   19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQST-EGLGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWIWESPALE-LPTDFGSGYPSDPKTKAWLAAHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHEKDLEKANAPTGTQSITSFLAKPVQKAKPA-TRAAFFTQRNMQDVTDF 301          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|570332378|gb|ETO80326.1| (ribonuclease HII [Phytophthora parasitica P1976] >gi|570991560|gb|ETP49269.1| ribonuclease HII [Phytophthora parasitica P10297])

HSP 1 Score: 265.774 bits (678), Expect = 5.597e-84
Identity = 146/291 (50.17%), Postives = 188/291 (64.60%), Query Frame = 0
Query:   59 PPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEW--EEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
            P +   G PV LGIDEAGRGPV+GPMVY AA+W V ++DAM A+GFDDSKAL  ++R  LF++M  T E +GW++  I A E++ KM  R+ ++LN++S D+A  +++ V  +G  V +VFVDTVGDP  YQ  L     H    I F V KKADSL+K VSAASIAAKVTRDR I DW+WE    + L TDFGSGYP D +   WL  + + VF FP+++RFSW T    +EK  V VEW  E++ E    P GT SI +F+       K A  RA +F QR M+ V DF
Sbjct:   19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQST-EGLGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPALE-LPTDFGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHEKDLEKANAPTGTQSITSFLAKPVQKAKPA-TRAAFFTQRNMQDVTDF 301          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|675187119|ref|XP_008902444.1| (ribonuclease HII [Phytophthora parasitica INRA-310] >gi|566028660|gb|ETI51571.1| ribonuclease HII [Phytophthora parasitica P1569] >gi|567966000|gb|ETK91459.1| ribonuclease HII [Phytophthora parasitica] >gi|567994712|gb|ETL44864.1| ribonuclease HII [Phytophthora parasitica] >gi|568054416|gb|ETM51197.1| ribonuclease HII [Phytophthora parasitica] >gi|568097739|gb|ETN12481.1| ribonuclease HII [Phytophthora parasitica INRA-310] >gi|570956345|gb|ETP21346.1| ribonuclease HII [Phytophthora parasitica CJ01A1])

HSP 1 Score: 262.692 bits (670), Expect = 6.945e-83
Identity = 145/291 (49.83%), Postives = 187/291 (64.26%), Query Frame = 0
Query:   59 PPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWE--EEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
            P +   G PV LGIDEAGRGPV+GPMVY AA+W V ++DAM A+GFDDSKAL  ++R  LF++M  T E +GW++  I A E++ KM  R+ ++LN++S D+A  +++ V  +G  V +VFVDTVGDP  YQ  L     H    I F V KKADSL+K VSAASIAAKVTRDR I DW+WE    + L TDFGSGYP D +   WL  + + VF FP+++RFSW T    +EK  V VEW   ++ E    P GT SI +F+       K A  RA +F QR M+ V DF
Sbjct:   19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQST-EGLGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPALE-LPTDFGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHGKDLEKANAPTGTQSITSFLAKPVQKAKPA-TRAAFFTQRNMQDVTDF 301          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|699254405|ref|XP_002127465.2| (PREDICTED: ribonuclease H2 subunit A-like isoform X2 [Ciona intestinalis])

HSP 1 Score: 254.603 bits (649), Expect = 1.921e-79
Identity = 133/288 (46.18%), Postives = 176/288 (61.11%), Query Frame = 0
Query:   60 PALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
            P L T +P  LGIDEAGRGPVLGPMVYA+ F  +   D +  +G DDSK L E+ R+ LF+ + +  E +GW+IH +    ++  ML R   +LN ISHD+A D++   L  GV VTEV+VDTVG P TY  KL+ +F    P+I FTV KKADS Y  VSAASI AKV RD+A+++W + E+ P    T +GSGYP D     WLR N + +FGFPS VRFSWSTT +L+E E V V W +++E       T+             KK   R ++F +  M+ V +F
Sbjct:   44 PKLLTSEPCCLGIDEAGRGPVLGPMVYASCFTPISCKDKLAGLGCDDSKVLKEEQRESLFETLNKASEYIGWMIHILSPAYISTSMLGRSKYNLNSISHDTAIDLIRSALKLGVEVTEVYVDTVGPPQTYAEKLKKIF----PSIKFTVEKKADSKYPVVSAASICAKVCRDKAVKEWRFREN-PDT-DTKYGSGYPADPVTKVWLRNNVDRIFGFPSFVRFSWSTTSKLLENEAVPVHWADDDEESSNEPITSYFS----------KKGNSRHQFFTENKMKRVTNF 315          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|813171944|ref|XP_012204727.1| (hypothetical protein SPRG_10192 [Saprolegnia parasitica CBS 223.65] >gi|641530537|gb|KDO24659.1| hypothetical protein SPRG_10192 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 252.292 bits (643), Expect = 5.248e-79
Identity = 140/290 (48.28%), Postives = 182/290 (62.76%), Query Frame = 0
Query:   58 IPPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
            +P +   G  V LGIDEAGRGP+LGPMVY AA+W V  D  M AMGFDDSKAL   +R  LF ++  T + VG+V  SI A E++  ML R   +LN++S D+A +M+  V   GV +T V+VDTVGDP  YQ  L   FG    AI FTV KKADSLYK VSAASIAAKVTRD  + +W WE    + L  D+GSGYP D +  +WL  +   VFG+P+++RFSW T    +++    VEW  ++E+   PAGT SI++F++     P K RKR  YF Q  +E   + 
Sbjct:    8 VPASCLDGADVMLGIDEAGRGPILGPMVYGAAYWPVSLDSTMRAMGFDDSKALSHDSRTQLFAKIKATAD-VGYVTRSISAAEISHNMLTRR-RNLNEMSRDAAIEMILAVQKAGVRLTHVYVDTVGDPGWYQSFLTKRFGG---AITFTVEKKADSLYKVVSAASIAAKVTRDAEVSEWTWEHASLK-LPIDYGSGYPSDPKTKQWLAAHVERVFGYPNILRFSWGTLESYLDR-MAAVEWPHDKEDA--PAGTQSIKSFMQT----PTKKRKRTPYFVQNHLEVATEL 284          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|669149220|ref|XP_008610172.1| (hypothetical protein SDRG_06186 [Saprolegnia diclina VS20] >gi|530738509|gb|EQC36751.1| hypothetical protein SDRG_06186 [Saprolegnia diclina VS20])

HSP 1 Score: 252.292 bits (643), Expect = 5.662e-79
Identity = 139/290 (47.93%), Postives = 181/290 (62.41%), Query Frame = 0
Query:   58 IPPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
            +P +   G  V LGIDEAGRGP+LGPMVY AA+W V  D  M AMGFDDSKAL  + R  LF + ++  + VG+V  SIPA E+A  ML R   +LN++S D+A +M+  V   GV +T V+VDTVGDP  YQ  L   F     +I FTV KKADSLYK VSAASIAAKVTRD  + +W WE    + L  D+GSGYP D +  +WL  +   VFG+P++VRFSW T    +++    VEW  ++E+   PAGT SI++F++     P K RKR  YF    +E   + 
Sbjct:    8 VPASCLDGAEVMLGIDEAGRGPILGPMVYGAAYWPVALDGVMRAMGFDDSKALSHEARTQLFAK-IKATDDVGYVTRSIPAAEIAHNMLTRR-RNLNEMSRDAAIEMILAVQRAGVRLTHVYVDTVGDPGWYQSFLTKRFNG---SITFTVEKKADSLYKVVSAASIAAKVTRDAEVSEWAWEHASLK-LPVDYGSGYPSDPKTKQWLAAHVERVFGYPNIVRFSWGTLESYLDR-MAAVEWPHDKEDA--PAGTQSIKSFMQT----PTKKRKRTPYFVHNHLEVASEL 284          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|340729627|ref|XP_003403099.1| (ribonuclease H2 subunit A [Bombus terrestris])

HSP 1 Score: 253.832 bits (647), Expect = 5.884e-79
Identity = 127/300 (42.33%), Postives = 184/300 (61.33%), Query Frame = 0
Query:   50 HGINKLWHIP--PALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
            H IN++ H+   P +   +P +LGIDEAGRGPVLGPMVY  A+  + E   ++ +G  DSK+L E+ RD +F ++ + H+ +GW +  I    +A  M  R  TSLN++S +SA ++  LV+  G  +TE++VDTVG P  YQ +LE +F    P I  TVAKKADS Y  VSAASI AKV RD A++ W + E+    ++T++GSGYP D    +WL +N +PVFGFP +VRFSWST  +++E + + VEWE+ E+ G  P      + F K      K   KR ++F +R + +    
Sbjct:   44 HSINRV-HLSDVPQICRDEPCQLGIDEAGRGPVLGPMVYGIAYAPLSEKQLLVDLGCADSKSLTEEQRDAIFNKICKQHKTIGWAVDVISPNIIANNMYRRVKTSLNEVSMNSAIELAKLVIEAGANITEIYVDTVGVPQKYQARLEQIF----PDIKITVAKKADSTYPIVSAASICAKVLRDHALKAWQFREEL---ITTEYGSGYPNDPDTKKWLSENVDPVFGFPHIVRFSWSTAEKILESKALSVEWEKVEDTGN-PGEQKISKFFAKSPVKSCKPQSKRHQFFTERCLSSTSKL 334          
BLAST of EWM24019.1 vs. NCBI_GenBank
Match: gi|524870844|ref|XP_005092202.1| (PREDICTED: ribonuclease H2 subunit A-like isoform X2 [Aplysia californica])

HSP 1 Score: 252.677 bits (644), Expect = 6.609e-79
Identity = 134/281 (47.69%), Postives = 180/281 (64.06%), Query Frame = 0
Query:   64 TGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFPQALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEENGGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETV 344
            T +P  LGIDEAGRGPVLGP+VY   F  V E      MGF DSK L E+ R+ +F +M    + +GW++  + +  ++  ML RE  +LN +SHD A  ++   L  GV VTEV+VDTVGDP  YQ KL+ +F    P I  TVAKKADSLY  VSAASI AKV RD+A++ WV++EDF      D+GSGYPGD +  ++L+ + + VFGFP+ VRFSWST   ++EK+ VGV+WE++EE  G   GT  +  F K K +  K   KR ++F  R ++ V
Sbjct:   31 TTEPCWLGIDEAGRGPVLGPLVYGICFSPVVEKQKFGEMGFADSKTLTEEQRESIFAKMNDALDLLGWIVEVLSSAYISTSMLRREKYNLNALSHDCAIGLIQKALDRGVNVTEVYVDTVGDPGKYQAKLKEIF----PNIEITVAKKADSLYPIVSAASICAKVARDQAVKSWVFKEDFA-VEECDYGSGYPGDPKTKKFLQDSFDKVFGFPTFVRFSWSTAGNIIEKDGVGVQWEDDEEEEG-AKGTPVLSHFFKKKDE--KAELKRHRFFTHRHLKHV 303          
The following BLAST results are available for this feature:
BLAST of EWM24019.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105306|gb|EWM24019.1|0.000e+0100.00ribonuclease h2 subunit a [Nannochloropsis gaditan... [more]
gi|299473412|emb|CBN77810.1|6.176e-8653.69conserved unknown protein [Ectocarpus siliculosus][more]
gi|568023979|gb|ETL98023.1|2.825e-8450.17ribonuclease HII [Phytophthora parasitica][more]
gi|570332378|gb|ETO80326.1|5.597e-8450.17ribonuclease HII [Phytophthora parasitica P1976] >... [more]
gi|675187119|ref|XP_008902444.1|6.945e-8349.83ribonuclease HII [Phytophthora parasitica INRA-310... [more]
gi|699254405|ref|XP_002127465.2|1.921e-7946.18PREDICTED: ribonuclease H2 subunit A-like isoform ... [more]
gi|813171944|ref|XP_012204727.1|5.248e-7948.28hypothetical protein SPRG_10192 [Saprolegnia paras... [more]
gi|669149220|ref|XP_008610172.1|5.662e-7947.93hypothetical protein SDRG_06186 [Saprolegnia dicli... [more]
gi|340729627|ref|XP_003403099.1|5.884e-7942.33ribonuclease H2 subunit A [Bombus terrestris][more]
gi|524870844|ref|XP_005092202.1|6.609e-7947.69PREDICTED: ribonuclease H2 subunit A-like isoform ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6685rna6685Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications