EWM23997.1, cds6666 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|585105284|gb|EWM23997.1| (trna (guanine-n7-)-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 985.326 bits (2546), Expect = 0.000e+0 Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0
Query: 1 MRDKLLVAAKCSGGAGILLCAYAGEDVFLIDTKQPGNVVALPVPDLSAASVDGTESNADGLGQVEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRATAEMLPKTSAFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVENGAKVLTGSGDQTLALWDAHTGCEVVRESLPPLEGELVAEGEQLGPENGERGRNSSKSPSTIVPCAVAVTSDSALAAVTLLGQSKLLVYALPALSLIQTLDLPSVPVGAAFMDNPEEAEGEVRRVLYVTVGAPEYLLAYRVTKDGEGGAWRLEAAEEGTGVLVSVRLFGLKMGLKASLTVDEGDEDFLGGMTKENLTVRCDWNSRQRREEHAERARRKRQDKRHRERDGAVAEEGKEGEADLPAKAKPRTGTQSGEKEGREEDTLAGQA 489
MRDKLLVAAKCSGGAGILLCAYAGEDVFLIDTKQPGNVVALPVPDLSAASVDGTESNADGLGQVEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRATAEMLPKTSAFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVENGAKVLTGSGDQTLALWDAHTGCEVVRESLPPLEGELVAEGEQLGPENGERGRNSSKSPSTIVPCAVAVTSDSALAAVTLLGQSKLLVYALPALSLIQTLDLPSVPVGAAFMDNPEEAEGEVRRVLYVTVGAPEYLLAYRVTKDGEGGAWRLEAAEEGTGVLVSVRLFGLKMGLKASLTVDEGDEDFLGGMTKENLTVRCDWNSRQRREEHAERARRKRQDKRHRERDGAVAEEGKEGEADLPAKAKPRTGTQSGEKEGREEDTLAGQA
Sbjct: 1 MRDKLLVAAKCSGGAGILLCAYAGEDVFLIDTKQPGNVVALPVPDLSAASVDGTESNADGLGQVEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRATAEMLPKTSAFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVENGAKVLTGSGDQTLALWDAHTGCEVVRESLPPLEGELVAEGEQLGPENGERGRNSSKSPSTIVPCAVAVTSDSALAAVTLLGQSKLLVYALPALSLIQTLDLPSVPVGAAFMDNPEEAEGEVRRVLYVTVGAPEYLLAYRVTKDGEGGAWRLEAAEEGTGVLVSVRLFGLKMGLKASLTVDEGDEDFLGGMTKENLTVRCDWNSRQRREEHAERARRKRQDKRHRERDGAVAEEGKEGEADLPAKAKPRTGTQSGEKEGREEDTLAGQA 489
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|299471322|emb|CBN79278.1| (tRNA (guanine-n(7)-)-methyltransferase complex subunit, putative [Ectocarpus siliculosus]) HSP 1 Score: 99.3673 bits (246), Expect = 1.022e-18 Identity = 98/314 (31.21%), Postives = 142/314 (45.22%), Query Frame = 0
Query: 98 LLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQ--EDVVLVNDKVGDVRMYRATAEMLPKTSA---FLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFV--ENGAKVLTGSGDQTLALWDAHTGCEV----VRESLPPL-EGELVAEG-------EQLGP--------------------ENGERGRNS------------SKSP--------STIVPCAVAVTSDSALAAVTLLGQSKLLVYALP-------------------ALSLIQTLDLPSVPVGAAFMD 333
+L R LPKK ++LFA + +P D G + E+VV+V+DK GD A A LP S+ LLGHTA T + G LAT DR E +R+S FP T ++ TYLLGH+ FVS++ V E G +L+G GD + LW+A G E+ VR++ L +G+ +EG E+ G +NG+ G +S S++P VP +V+ + D AV + G LL+ + +L+ L LPSVP+ A F+D
Sbjct: 56 VLGKRELPKKPTSVLFAPVVAPRAD---GAAATREKTEEVVVVSDKCGD-----AYAAPLPDPSSALKHLLGHTAMTITAMVTLKRGQLLATADRAEHIRVSQFPRTTIVHTYLLGHQDFVSALAAVPGEGGTMLLSGGGDGRVGLWEAEAGRELAMISVRQACQDLADGDNASEGVATMDLEEEEGSKETAAAADGGGGGSGDASSCKNGDSGADSRGEGEAGSGGVTSETPKGGGGGGGGGGVPLSVSCSEDGRTVAVVVSGLEGLLLLNISHGGGGSEGAEGGAGAGASFSLTPRARLQLPSVPIQAGFLD 361
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|1191040415|ref|XP_020897584.1| (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like [Exaiptasia pallida] >gi|999976878|gb|KXJ16052.1| tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 [Exaiptasia pallida]) HSP 1 Score: 97.0561 bits (240), Expect = 3.111e-18 Identity = 65/219 (29.68%), Postives = 111/219 (50.68%), Query Frame = 0
Query: 33 KQPGNVVALPVP-DLSAASVDGTESNADGLGQVEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRATAEMLPKTSAFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVENGAKVLTGSGDQTLALWDAHTGCEVVRESL 250
K N+ + +P D+ +D + + LG + + +GR +K+L+LW T + LS RL+ KKA A++F + ++ V+V DK GDV Y+ +A+ F+LGH + + + L+ D + T +RDEK+R+S+FP + I++Y LGH FVSS+ + +++GSGD + LWD G ++ + L
Sbjct: 31 KFSCNLSDIKMPQDVKKQIIDDNKQDM-TLGHGNISSFSPSGRLYGFCTANKILSLWRTD---TWECLSTRLIEKKATAVVFT----------------NNDEYVIVADKAGDV--YKFSAKDSDSKGDFVLGHISMIMDMV-LTKDNKYIITAERDEKIRVSYFPNSYSIQSYCLGHSDFVSSIKLLSKDDLLVSGSGDSMVILWDYKDGKKIHTKQL 226
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|443731148|gb|ELU16385.1| (hypothetical protein CAPTEDRAFT_227793 [Capitella teleta]) HSP 1 Score: 91.6633 bits (226), Expect = 1.566e-16 Identity = 81/282 (28.72%), Postives = 123/282 (43.62%), Query Frame = 0
Query: 57 NADGLGQVEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRATAEMLPKTSAFLLGHTASVGTCLD--LSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVENGAKVLTGSGDQTLALWDAHTGCEVVRESLPPLEGELVAEGEQLGPENGERGRNSSKSPSTIVPCAVAVTSDSALAAVTLLGQSKLLVYAL-----PALSLIQTLDLPSVPVGAAF 331
N +G ++ A A + GR AA K + +W ++ L R L ++ ++ F+R E V+V DK GDV Y T + + LLGH + + LD L D L T DRDEK+R+S FP + I + LGH+ FVS +++ +L+GSGD TL LWD + C+ L+ + +Q + ++AV S+ + G+S L+VYA+ P L +QTL L V F
Sbjct: 32 NEEGRDRILAAAFSHTGRFFAACDDFKQMVIW-AIEAGQWKTLGTRSLHRRCTSVSFSR----------------DESSVVVADKSGDVFQY--TVKTVEGDGRLLLGHVSMI---LDACLCADDQLLVTADRDEKLRVSRFPNSYNIHGFCLGHKEFVSCSRWLDEEKLLLSGSGDGTLKLWDLES-CD--------LKSSVDCRSQQ---------------TDDLEVSSIAVCSEYKIVVAGFNGKSLLMVYAIQSTPNPRLEFVQTLTLSGVLWDMTF 267
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|1021809289|gb|KZP01540.1| (hypothetical protein CALVIDRAFT_9711 [Calocera viscosa TUFC12733]) HSP 1 Score: 91.2781 bits (225), Expect = 4.511e-16 Identity = 57/151 (37.75%), Postives = 81/151 (53.64%), Query Frame = 0
Query: 98 LLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMY---------RATAEMLPKTSAFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVENGAKVL-TGSGDQTLALWD 238
LLS R LPK+A ++ FA DS + ++V DK GDV Y +T+E + LLGH S+ T L LSPDG + TGDRDE +R+S +P + VIE +L GH R+V++++ + L +G G+ L LWD
Sbjct: 75 LLSTRELPKRATSITFA--DSAT---------------LIVADKFGDVFRYPLHPPAPAEASTSEKPTQEGELLLGHV-SIITALQLSPDGKHIITGDRDEHIRVSRYPASYVIERFLFGHRRYVTALHIPPFAPETLISGGGEPQLFLWD 207
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|1045447238|gb|OCF40988.1| (hypothetical protein I317_05187 [Kwoniella heveanensis CBS 569]) HSP 1 Score: 91.2781 bits (225), Expect = 6.285e-16 Identity = 66/208 (31.73%), Postives = 103/208 (49.52%), Query Frame = 0
Query: 64 VEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRA-TAEMLPKTS-----------------AFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVE-NGAKVLTGSGDQTLALWDAHTGCEVVRESLPP 252
+ +A+T +G+ AA++ K L +WD D A L S R + KK + F GP + ++V DKVGD +Y P TS +LLGHT+ + + + ++ DG + T DRDE +RIS FP + V+E YL GHE FVS+++ + + +++G GD +L +WD TG V + + P
Sbjct: 59 IRLVAVTEDGKIAASIGDDKSLKVWDIKDDAI-TLRSTRAMVKKGSHITF------------GP-----DQSIVVCDKVGDAYLYPLDPVPADPSTSRPPMYTLVSDPTKNPDCTYLLGHTSILNSHV-VTSDGKSIITADRDEHIRISRFPKSYVVEKYLFGHEGFVSALHIPSTHPSTLISGGGDASLRIWDHTTGNLVSKVDIYP 247
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|1045441646|gb|OCF35779.1| (hypothetical protein I316_02271 [Kwoniella heveanensis BCC8398]) HSP 1 Score: 91.2781 bits (225), Expect = 6.399e-16 Identity = 66/208 (31.73%), Postives = 103/208 (49.52%), Query Frame = 0
Query: 64 VEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRA-TAEMLPKTS-----------------AFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVE-NGAKVLTGSGDQTLALWDAHTGCEVVRESLPP 252
+ +A+T +G+ AA++ K L +WD D A L S R + KK + F GP + ++V DKVGD +Y P TS +LLGHT+ + + + ++ DG + T DRDE +RIS FP + V+E YL GHE FVS+++ + + +++G GD +L +WD TG V + + P
Sbjct: 59 IRLVAVTEDGKIAASIGDDKSLKVWDIKDDAI-TLRSTRAMVKKGSHITF------------GP-----DQSIVVCDKVGDAYLYPLDPVPADPSTSRPPMYTLVSDPTKNPDCTYLLGHTSILNSHV-VTSDGKSIITADRDEHIRISRFPKSYVVEKYLFGHEGFVSALHIPSTHPSTLISGGGDASLRIWDHTTGNLVSKVDIYP 247
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|134114021|ref|XP_774258.1| (hypothetical protein CNBG2390 [Cryptococcus neoformans var. neoformans B-3501A] >gi|338819705|sp|P0CS53.1|TRM82_CRYNB RecName: Full=tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; AltName: Full=Transfer RNA methyltransferase 82 >gi|50256893|gb|EAL19611.1| hypothetical protein CNBG2390 [Cryptococcus neoformans var. neoformans B-3501A]) HSP 1 Score: 90.8929 bits (224), Expect = 8.109e-16 Identity = 67/205 (32.68%), Postives = 99/205 (48.29%), Query Frame = 0
Query: 58 ADGLG-QVEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYR-------ATAEMLPKTS-----------AFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNF-VENGAKVLTGSGDQTLALWDAHTG 242
ADG G + LA+ +G AA L K LA+WD P L R + KK L FA+ S +++ DKVGDV Y +AE P + +LLGH + + + ++PDG R+ T DRDE +R+S +P VI+ YL GH+ FVS+++ N + +L+ GD +L +W+ TG
Sbjct: 40 ADGTGGLIRLLAVREDGEVAATLGEDKQLAVWDIQHD-RPQLRHTRTVVKKGSCLSFAKDGS-----------------IILTDKVGDVYSYPLDPVPIDPSAERPPMYTLVADPSQNPDATYLLGHVSMLNAHV-MTPDGRRIITADRDEHIRVSRYPKAYVIDKYLFGHDGFVSALHIPPSNPSLLLSAGGDPSLLIWNPSTG 225
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|585716687|ref|XP_006825565.1| (PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like [Saccoglossus kowalevskii]) HSP 1 Score: 89.3521 bits (220), Expect = 1.067e-15 Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 0
Query: 52 DGTESNADGLGQVEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRATAEMLPKTSAFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVE-NGAKVLTGSGDQTLALWDAHTG 242
D T+S G++ A + NG A K L +W+TS + LS R + K+ AL F+ H ED ++V+DK GDV Y+ + K +LGH + V + LS D + T DRDEK+R+SHFP I +Y LGH FVS + + N +L+G+GD T+ +W+ G
Sbjct: 43 DSTDS-----GRILASGFSENGEYFAICDNQKQLTVWNTSTEWTK--LSSRPVVKRCTALAFS----------------HNEDNIIVSDKAGDV--YKFSILDPDKPGELILGHLSMVLDVI-LSEDDRFVVTADRDEKIRVSHFPNGYNIHSYCLGHTDFVSRLKILSGNSYILLSGAGDGTIRVWNYLEG 208
BLAST of EWM23997.1 vs. NCBI_GenBank
Match: gi|1062684538|ref|XP_017963634.1| (PREDICTED: tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wuho [Drosophila navojoa]) HSP 1 Score: 89.3521 bits (220), Expect = 1.078e-15 Identity = 69/189 (36.51%), Postives = 97/189 (51.32%), Query Frame = 0
Query: 65 EALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRAT-AEMLPKTSAFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVE-NGAKVLTGSGDQTLALWDAHTGCEVVRESLP 251
+ +ALT G++A LY+ S +LLS R L + + AL FA DS S VLV DK GD Y E PK LLGH + V L +PD + T DRD+K+R++++P T I +Y LGH+ FVS + + N +++ SGD+TL LW TG EV+++ LP
Sbjct: 76 QLIALTTVGQKALLLYK---------SRPEHAMLLSVRALSRASSALAFAA-DSSS---------------VLVTDKTGDCYQYDCVEVEAPPK---LLLGHLSIVYD-LVWTPDLKHIITCDRDDKIRVTNYPATHDIHSYCLGHKEFVSGLALLPGNDDLLISISGDKTLRLWKYLTGKEVLQQQLP 235 The following BLAST results are available for this feature:
BLAST of EWM23997.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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