EWM24028.1, cds6662 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24028.1 vs. NCBI_GenBank
Match: gi|585105315|gb|EWM24028.1| (hypothetical protein Naga_100040g29 [Nannochloropsis gaditana]) HSP 1 Score: 209.92 bits (533), Expect = 7.481e-69 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 MAFARTVARQMGHGLERVDVSLSMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHWD 100
MAFARTVARQMGHGLERVDVSLSMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHWD
Sbjct: 1 MAFARTVARQMGHGLERVDVSLSMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHWD 100
BLAST of EWM24028.1 vs. NCBI_GenBank
Match: gi|1173945136|gb|OQR93800.1| (hypothetical protein ACHHYP_02267 [Achlya hypogyna]) HSP 1 Score: 63.5438 bits (153), Expect = 3.066e-11 Identity = 27/77 (35.06%), Postives = 47/77 (61.04%), Query Frame = 0
Query: 23 SMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHW 99
++ WWK Y + G + ++LSP+EQR + + AP K L+ ++ + ++P+F++ + TV WA E D+ HR HW
Sbjct: 7 ALATWWK-KYAPETGRVVRTLSPYEQRPVDYLIKSAPQKALRKVQENALVLVPSFILLWGTVAWAKAENDRYHRTHW 82
BLAST of EWM24028.1 vs. NCBI_GenBank
Match: gi|669145848|ref|XP_008608486.1| (UcrQ family protein [Saprolegnia diclina VS20] >gi|530739917|gb|EQC38159.1| UcrQ family protein [Saprolegnia diclina VS20]) HSP 1 Score: 62.003 bits (149), Expect = 1.303e-10 Identity = 27/77 (35.06%), Postives = 46/77 (59.74%), Query Frame = 0
Query: 23 SMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHW 99
++ WWK Y + G + ++LSP+EQR + + AP K L+ ++ + ++P+F + + TV WA E D+ HR HW
Sbjct: 7 ALTTWWK-KYAPETGRVVRTLSPYEQRPVDYLIKSAPQKALRKVQENALVLVPSFFLLWGTVAWAKGENDRYHRTHW 82
BLAST of EWM24028.1 vs. NCBI_GenBank
Match: gi|1173944929|gb|OQR93612.1| (hypothetical protein THRCLA_22296 [Thraustotheca clavata]) HSP 1 Score: 62.003 bits (149), Expect = 1.421e-10 Identity = 26/77 (33.77%), Postives = 48/77 (62.34%), Query Frame = 0
Query: 23 SMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHW 99
++ WWK Y ++G + ++LSP+EQR + + AP K L+ ++ + ++P+F++ + TV W+ E D+ HR HW
Sbjct: 7 ALATWWK-KYAPESGRVVRTLSPYEQRPVDYLIKSAPQKALRKVQENALMLVPSFLLLWGTVAWSKAENDRYHRSHW 82
BLAST of EWM24028.1 vs. NCBI_GenBank
Match: gi|698795028|ref|XP_009830543.1| (hypothetical protein H257_06866 [Aphanomyces astaci] >gi|574114119|gb|ETV79607.1| hypothetical protein H257_06866 [Aphanomyces astaci]) HSP 1 Score: 60.4622 bits (145), Expect = 5.297e-10 Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 0
Query: 23 SMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHW 99
+++ WW Y+ ++G + + LSPFEQR + + AP K L+ ++ ++P+F++ + TV WA E D+ HREHW
Sbjct: 11 ALKTWWS-KYSYESGRVVRQLSPFEQRPVDYLIRTAPEKALRKVQENFFPLVPSFLLLWGTVAWAVDENDRHHREHW 86
BLAST of EWM24028.1 vs. NCBI_GenBank
Match: gi|673042985|ref|XP_008875453.1| (hypothetical protein H310_10775 [Aphanomyces invadans] >gi|574469126|gb|ETV96142.1| hypothetical protein H310_10775 [Aphanomyces invadans]) HSP 1 Score: 60.4622 bits (145), Expect = 6.167e-10 Identity = 27/78 (34.62%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 23 SMRKWWKLGYTRQNGLITKSLSPFEQRIISPMFDDAPNKVLKYLKRWSTTILPAFVITYSTVKWADWEFDQIHREHWD 100
+++ WW Y+ ++G + + LSP+EQR + + AP K L+ ++ ++P+F++ + TV WA E D+ HR+HWD
Sbjct: 11 ALKTWWS-KYSYESGRVVRQLSPYEQRPVDYLIRTAPQKALRKVQENFFPLVPSFLLLWGTVAWAVDENDRHHRQHWD 87 The following BLAST results are available for this feature:
BLAST of EWM24028.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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