EWM24012.1, cds6654 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|585105299|gb|EWM24012.1| (mortality factor 4-like protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 770 bits (1987), Expect = 0.000e+0 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0
Query: 1 MHRVGRRRVSTSATSVRCTEIKEKTGMIAVDNAAAPVEPAALDVTGSTKTFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQAAKRRPGPAAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYIKKEEEKEEGKGEGKGSQAVAESVMKKGRRTNAA 381
MHRVGRRRVSTSATSVRCTEIKEKTGMIAVDNAAAPVEPAALDVTGSTKTFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQAAKRRPGPAAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYIKKEEEKEEGKGEGKGSQAVAESVMKKGRRTNAA
Sbjct: 1 MHRVGRRRVSTSATSVRCTEIKEKTGMIAVDNAAAPVEPAALDVTGSTKTFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQAAKRRPGPAAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYIKKEEEKEEGKGEGKGSQAVAESVMKKGRRTNAA 381
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|298708855|emb|CBJ30813.1| (chromatin binding protein, putative [Ectocarpus siliculosus]) HSP 1 Score: 213.001 bits (541), Expect = 5.206e-63 Identity = 126/295 (42.71%), Postives = 177/295 (60.00%), Query Frame = 0
Query: 51 FKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQAAKRRPGPAAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSD-PQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFL 344
FK + V A DSG LYEAK+ K + G YF+HY GW S+WD+WV DL+ +L++Q QL+ K+ AA++++ ++ + + + + + A D++ E +S +VK+AMPFTLKKQLV DWE VT+ P LV LPR +AA V++ ++E K +GT Q AR +E++ G+R YFDKALPLILLYR ER QY + + G S PS++YGAEHLLR+FVRLP+LLA + L P E+TQVQ L + L+F+QK H F+
Sbjct: 18 FKADDKVYAMDSGDLYEAKVIKFKPS--GEQFTYFLHYMGWNSRWDKWVVESDLMAAGPEALEMQQQLKDKKKKAKVNAAKRKEDQKV---KEQIKKEDQKIKKARVDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPRELTAANVMAQYMESKANRGTPQ--QTARAQELMDGVRIYFDKALPLILLYRQERTQY--------------DITVQKLPGKS------PSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFV 285
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|971513057|dbj|GAQ85144.1| (hypothetical protein KFL_002210090 [Klebsormidium nitens]) HSP 1 Score: 199.519 bits (506), Expect = 8.622e-58 Identity = 128/330 (38.79%), Postives = 177/330 (53.64%), Query Frame = 0
Query: 26 GMIAVDNAAAPVEPAALDVTGSTKT----FKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQL-RQAAKRRPGPAAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYIKK 350
G + + A V AA D + K F E E VLA +YEAK QK + KK +Y++HY GW WD WV + LL + ++ Q ++ R+AA++R + +EG KRGK R AD + A E+ + VKL + LKKQL+DDW+ VT + LVPLPRSP+ +L +LE + ++ ++ T E++ GLR YFDKALP +LLY ER+Q+ + P S S PS++YGAEHLLRLFV+LP LL + A M Q+QAKL + LKFLQK FL+SY+K+
Sbjct: 4 GAVPKEEAETSVSAAATDASDEKKKDTGPFAEGEKVLAYHGPLIYEAKTQKAEFRKK--EWRYYVHYLGWSKSWDEWVDTKRLLKITDANIAKQKKVHREAAEKRGKSKVGSSERKEGESKRGK-------KRKADAN--EAKEEEPEQVVKLPLSSHLKKQLIDDWKHVTEN-NKLVPLPRSPTVNDILQKYLEARTKKASSETDDATG--EVVDGLRSYFDKALPAMLLYSQERDQFNDVIPEESDIS--------------------PSNIYGAEHLLRLFVKLPELLVYTNMEEASMAQLQAKLIDFLKFLQKNQTSFFLSSYVKR 299
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|719970381|ref|XP_010271225.1| (PREDICTED: protein MRG1 [Nelumbo nucifera]) HSP 1 Score: 199.519 bits (506), Expect = 1.734e-57 Identity = 132/336 (39.29%), Postives = 179/336 (53.27%), Query Frame = 0
Query: 29 AVDNAAAPVEPAALDVTGSTKTFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQL--RQAAKRRPGPA--------------AEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHK-KEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSY 347
A D +P+A D + F E E VLA ++YEAK+ KV+ GKK +Y++HY GW WD WVG + L+ E +++ Q L RQ A + P +KED R RGK R +D +E ++ + VK+ +P TLKKQLVDDWE VT+ LV LPRSPS +L +L++K K+ G + + E+L GLR YFDKALP++LLY+ ER+QY E + ++S PS VYGAEHLLRLFV+LP LLA A + MT++Q KL + LKFLQK FL++Y
Sbjct: 13 ATDGGDTNGDPSASD----SSLFSEGEKVLAYHGPRIYEAKVLKVELGKK--EWKYYVHYLGWSKNWDEWVGVDRLMKFTEENVRKQQTLEKRQGADKNPKSGRSTQIKPKNSTDAKVDKEDVR-NHVSRGK-------KRKSDSGVEEKDTESVEKLVKVQIPSTLKKQLVDDWEFVTQLGK-LVKLPRSPSVDDILKKYLDYKSKKDGMIA----ESIGEILKGLRCYFDKALPVLLLYKKERQQYH-----------------EAVVDNTS-----PSTVYGAEHLLRLFVKLPELLAYASIEEETMTRLQQKLLDFLKFLQKNQSAFFLSTY 307
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|953488785|emb|CEG47651.1| (nua4 complex subunit eaf3 homolog [Plasmopara halstedii]) HSP 1 Score: 195.282 bits (495), Expect = 6.211e-56 Identity = 120/325 (36.92%), Postives = 174/325 (53.54%), Query Frame = 0
Query: 50 TFKEQEVVLAKDSGQLYEAKIQKVQEGK-----------KGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQ----------AAKRRPGPAA--EKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKK---EQGTAST-VQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSY 347
T K ++VLA +Y+AK+QKV G+ S QY++HYQGW KWD WV + +L + LQ + ++ +AKR+ +A + R+ FKR K + P A E++S QV + MPF+LKKQLV+DW+ VT PH LVPLPR P+ + ++ ++L KK +G A+ + +E ++ G++ YFD+AL ILLYR ER QY L + + + AL S +YGAEHL+RLFVRLP LLA A ++P + Q+QA+L + LKF+QK F+T Y
Sbjct: 2 TVKVGDIVLAYHGVMIYDAKVQKVDNGQGVQETTVAKNQVSSNTQYYLHYQGWAKKWDEWVRHDRVLEDTPANRALQKKAKEDLAKAKTNKRSAKRKKISSAGVDTPSTRKSPFKRLKRSTDGEFEEYPGPTEGLAEERSSTKQVNIQMPFSLKKQLVEDWKNVTHVPHKLVPLPRKPNVSQIIQTYLTFKKSKVREGDANDEKEYKNVEGIMVGVQSYFDRALSSILLYRMERRQYQEL---------QQNENKDVAL----------SQIYGAEHLIRLFVRLPVLLASANISPRGLNQIQARLNDFLKFIQKNSAAWFVTEY 307
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|747098450|ref|XP_011097238.1| (protein MRG1 [Sesamum indicum]) HSP 1 Score: 194.126 bits (492), Expect = 1.536e-55 Identity = 127/333 (38.14%), Postives = 173/333 (51.95%), Query Frame = 0
Query: 45 TGSTKTFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQL-------------RQAAKRRPGPAAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYIKKEEEKEEGKGEGKGS 364
+GS F E E VLA ++YEAK+QK + K + +YF+HY GW WD WVG + L+ E +++ Q L R A + G A K D E KG+ R AD +E P ++ +K+ +P LKKQLVDDWE +T+ + LV LPRSPS +L+ +LE++ ++ T + E+L+GLR YFDKALP ILLY+ ER+QY A S + + PS VYGAEHLLRLFV+LP LL + + ++Q KL E LKFLQ FL SY + EG G+GK +
Sbjct: 23 SGSKSLFSEGEKVLAYHGPRIYEAKVQKAEFRK--NEWRYFVHYLGWNKNWDEWVGMDRLMKHTEENIQKQQALDKKAGVDKNTKSGRSAQTKPKGSADAKVDKEEAKNIVAKGK-----KRKADSGIEDNPA--TEKLIKIQIPPNLKKQLVDDWEFITQQ-NKLVKLPRSPSVDEILTKYLEYRSKKDGMMTDAVG---EILNGLRSYFDKALPTILLYKKERQQYRE---AISDNVS-------------------PSSVYGAEHLLRLFVKLPELLGYVKIEEETLIRLQQKLLEFLKFLQNNQSTFFLASY-----DGPEGGGKGKDN 315
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|731336984|ref|XP_010679548.1| (PREDICTED: protein MRG1 [Beta vulgaris subsp. vulgaris] >gi|870858252|gb|KMT09770.1| hypothetical protein BVRB_6g127500 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 193.741 bits (491), Expect = 2.545e-55 Identity = 120/307 (39.09%), Postives = 170/307 (55.37%), Query Frame = 0
Query: 47 STKTFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLP-KDEHSLKLQAQLRQAAKRRPGPAAEKEDGREG-----GFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSY 347
+T+ + E E VLA ++YEAK+QK++ KK +YF+HY GW WD WV A+ L+ DE+ +Q QL A +++ G + GR K K E +V++ + +++ VK+ MP TLKKQLVDDWE V++ LV LPRSP+ +L +LE++ + T +A E+L+GLR YFDKALPL+LLY+ ER+QY A ++ S PS VYGAEHLLRLFV+LP LLA + MT++Q KL + ++FLQK FL+ Y
Sbjct: 29 TTRLYSEGEKVLAYHGPRIYEAKVQKIETRKK--EWRYFVHYLGWNKNWDEWVSADRLMKITDEN---IQKQL--ALEKKLGADKHHKSGRSAQTKPKDAKLDKEETKNNVAKGKKRKTDEKESISAEKLVKIQMPSTLKKQLVDDWEFVSQKDK-LVKLPRSPNVDDILKKYLEYRTRKDGTMTDSIA---EILNGLRCYFDKALPLMLLYKKERQQYHE----AVTNNVS------------------PSTVYGAEHLLRLFVKLPELLAYVNMEEETMTRLQQKLVDFIRFLQKNQSTFFLSVY 302
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|1201316540|gb|OVA15917.1| (Chromo domain/shadow [Macleaya cordata]) HSP 1 Score: 193.356 bits (490), Expect = 3.324e-55 Identity = 127/335 (37.91%), Postives = 172/335 (51.34%), Query Frame = 0
Query: 25 TGMIAVDNAAAPVEPAALDVTGSTKTFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQAAKRRPGPAAEKEDGREGGFKRGKGEG----------GEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHK-KEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYA-SLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSY 347
TG A D V D + + F E E VLA +YEAK+QKV+ KK +YF+HY GW WD WVG++ LL + +++ Q QA ++ G + GR K G G+ R D +E + + VK+ +P TLKKQLVDDWE V + LV LPRSPS +L +L++K K+ G + + E+L GLR YFDKALP++LLY+ ER+QY ++ SPSS VYGAEHLLRLFV+LP LLA A + T++Q KL + LK+LQK FL++Y
Sbjct: 6 TGGGAKDETDTDVGDTNADPSSDSGAFSEGEKVLAYHGPCIYEAKVQKVESRKKDR--RYFVHYLGWNKNWDEWVGSDRLLKFTDENIRKQ----QALAKKQGADKNPKSGRSSQMKPKSSTGKFSALIVVAVGKGKKRKGDSSIEEKDTVSIEKLVKIQIPSTLKKQLVDDWEFVAQ-LGKLVKLPRSPSVDDILKKYLDYKSKKDGMIA----ESIGEILKGLRCYFDKALPVMLLYKKERQQYNEAITDDISPSS-----------------------VYGAEHLLRLFVKLPELLAYANIEEETSTRLQQKLLDFLKYLQKNQSTFFLSTY 306
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|168065061|ref|XP_001784474.1| (predicted protein [Physcomitrella patens] >gi|162663949|gb|EDQ50687.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 192.586 bits (488), Expect = 3.911e-55 Identity = 120/307 (39.09%), Postives = 161/307 (52.44%), Query Frame = 0
Query: 48 TKTFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQL-------RQAAKRRPGPAAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHKKEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQYASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSY 347
T FKE E VLA +Y+ KIQK + K + +YF+HY GW WD WVGA+ L+ E +L+ Q +L +Q+ R P + R+ K G R +DP E D +K+++P TLKKQLV+DWE +T+ LV LPRSPSA + +++ K ++ A L E+L+GLR YFDK+LP +LLY ER QYAS PA S S P +YGAEHLLRLFV+L LL + +TQ+Q KL + +KFLQ+ FLTSY
Sbjct: 16 TGPFKEGEKVLAYHGPLVYDTKIQKAEFQK--NEWKYFVHYLGWSKNWDEWVGADRLMKPTEGNLEKQKKLFKSQTGDKQSKGRVPAGKQKSASERDELKNENKLSGTRGKKRKSDPVSESKVTDELDQALKISLPGTLKKQLVEDWEFITQLGK-LVKLPRSPSAEEIFKKYIDCKTKRDGAVDDSLI---EVLNGLRSYFDKSLPAMLLYPQERAQYASAVPAGSDVS--------------------PCSIYGAEHLLRLFVKLSELLVYTNMEHEALTQLQQKLADFVKFLQRNQSNFFLTSY 296
BLAST of EWM24012.1 vs. NCBI_GenBank
Match: gi|1105494894|ref|XP_019076604.1| (PREDICTED: protein MRG1 isoform X6 [Vitis vinifera]) HSP 1 Score: 192.586 bits (488), Expect = 5.820e-55 Identity = 125/337 (37.09%), Postives = 178/337 (52.82%), Query Frame = 0
Query: 31 DNAAAPVEPAALDVTGSTK-TFKEQEVVLAKDSGQLYEAKIQKVQEGKKGSAPQYFIHYQGWKSKWDRWVGAEDLLPKDEHSLKLQAQLRQAAKRRPGPAAEKEDGREGGFKRGKGEGGEDVSRPADPDLEPAPEKNSDPQVKLAMPFTLKKQLVDDWELVTRPPHHLVPLPRSPSAAAVLSSFLEHK-KEQGTASTVQLARLEEMLHGLREYFDKALPLILLYRHEREQY--ASLFPAASPSSASRPTSTEPALGSSSGAAPRPSDVYGAEHLLRLFVRLPRLLALAPLAPAEMTQVQAKLGELLKFLQKQHGEIFLTSYIKKEEEKEEGKGEGKG 363
D++ + + D+ S TF E E VLA ++YEAK+QK + KK +YF+HY GW WD WVG + L+ E ++ Q QA ++ G + GR K R +D +E +++ VK+ +P TLKKQLVDDW+ VT+ LV LPR P+ A+L +LE++ K+ GT + + E+L+GLR YFD+ALP++LLY+ ER+Q+ A P SPS+ VYGAEHLLRLFV+LP LLA + + +Q K + LKFLQK FL++Y + + EG G GKG
Sbjct: 10 DDSTTDADTSTGDLPASNSGTFSEGEKVLAYHGPRIYEAKVQKAEFRKK--EWRYFVHYLGWNKNWDEWVGMDRLMKHTEENVLKQ----QALDKKQGAEKNPKSGRSAQAKPKSSTVARGKRRKSDSGIEDNA--STEKLVKIPIPATLKKQLVDDWDFVTQQ-DKLVKLPRIPNVDAILIKYLEYRIKKDGTMTDY----VAEILNGLRSYFDRALPMMLLYKKERQQFQEAIYHPDLSPST-----------------------VYGAEHLLRLFVKLPELLACVNIEEETLIGMQQKFIDFLKFLQKNQSTFFLSAY--EGSKSSEGSGRGKG 308 The following BLAST results are available for this feature:
BLAST of EWM24012.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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