EWM24014.1, cds6650 (CDS) Nannochloropsis gaditana

Overview
NameEWM24014.1
Unique Namecds6650
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:211391..211495 -
Alignment locationCM002469.1:210134..211264 -

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Properties
Property NameValue
Protein idEWM24014.1
Productprotein of unknown function DUF4151
Orig transcript idgnl|cribi|Naga_100040g14.2012.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:211391..211495 -
CM002469.1supercontigCM002469.1:210134..211264 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM24014.1 vs. NCBI_GenBank
Match: gi|585105301|gb|EWM24014.1| (protein of unknown function DUF4151 [Nannochloropsis gaditana])

HSP 1 Score: 807.364 bits (2084), Expect = 0.000e+0
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
Query:    1 MGDSVRDLMRKAAKDKQRKADAIAAAVAKSKGKEELLALLRKKVGENAPTAKKTLAAAAAASPSAEEQHSALFGSNLPDATTSSSASTQKTWKVALSALPGAMAPPPPRSRQPPPPPPSPALPPPDPPATTKALPGIEHVDSDDEEEEEAVQAITPSLPVPPAALPAGFFDEGVDVAENAAVRGGNVEENDGDGEAGSLPSSPKPETSSASTSALPTGFFDDPEADALAHNIDLNAQKEAEARKEWEDFQKFAADVAVAEAGQEAVEEEEWEEEERRKELEHLYYTARLAGLIATSGEATERRMKKRGKDGEGEGEGEGMKKGEAVSNSGALPGVPSKAEAPTWRAVPEDEDGDGKERVGDEGREKETVAALEISAMLREKKRRKKEAMQEVVQDGYVAPDPLDWRAKSFA 411
            MGDSVRDLMRKAAKDKQRKADAIAAAVAKSKGKEELLALLRKKVGENAPTAKKTLAAAAAASPSAEEQHSALFGSNLPDATTSSSASTQKTWKVALSALPGAMAPPPPRSRQPPPPPPSPALPPPDPPATTKALPGIEHVDSDDEEEEEAVQAITPSLPVPPAALPAGFFDEGVDVAENAAVRGGNVEENDGDGEAGSLPSSPKPETSSASTSALPTGFFDDPEADALAHNIDLNAQKEAEARKEWEDFQKFAADVAVAEAGQEAVEEEEWEEEERRKELEHLYYTARLAGLIATSGEATERRMKKRGKDGEGEGEGEGMKKGEAVSNSGALPGVPSKAEAPTWRAVPEDEDGDGKERVGDEGREKETVAALEISAMLREKKRRKKEAMQEVVQDGYVAPDPLDWRAKSFA
Sbjct:    1 MGDSVRDLMRKAAKDKQRKADAIAAAVAKSKGKEELLALLRKKVGENAPTAKKTLAAAAAASPSAEEQHSALFGSNLPDATTSSSASTQKTWKVALSALPGAMAPPPPRSRQPPPPPPSPALPPPDPPATTKALPGIEHVDSDDEEEEEAVQAITPSLPVPPAALPAGFFDEGVDVAENAAVRGGNVEENDGDGEAGSLPSSPKPETSSASTSALPTGFFDDPEADALAHNIDLNAQKEAEARKEWEDFQKFAADVAVAEAGQEAVEEEEWEEEERRKELEHLYYTARLAGLIATSGEATERRMKKRGKDGEGEGEGEGMKKGEAVSNSGALPGVPSKAEAPTWRAVPEDEDGDGKERVGDEGREKETVAALEISAMLREKKRRKKEAMQEVVQDGYVAPDPLDWRAKSFA 411          
BLAST of EWM24014.1 vs. NCBI_GenBank
Match: gi|298708070|emb|CBJ30423.1| (hypothetical protein Esi_0189_0054 [Ectocarpus siliculosus])

HSP 1 Score: 70.4774 bits (171), Expect = 1.748e-9
Identity = 80/225 (35.56%), Postives = 106/225 (47.11%), Query Frame = 0
Query:  215 LPTGFFDDPEADALAHNIDLNAQKEAEARKEWEDFQKFAADVAVAEAGQEAVEEEEWEEEERRKELEHLYYTARLAGLIATSGEATERRMKKRGKDGEGEGEGE---GMKKGEAVSNSGALPGVPSK--------AEAPTWRAVPEDEDGDGKERVGDEGREKETVAA--------------------LEISAMLREKKRRKKEAMQEVVQDGYVAPDPLDWRAK 408
            LP GFFDDPE DA +  +DL A+K+ E + EW++F  FA +V   E  +E  EE   E++E+ +ELE      RLA L+    E+   R +KR +   GE E E    ++K    S +GA+     K         E       P+  DG G    G E  E E   A                     EISAMLR +KR+KK A +E     YV  DPLDWRA+
Sbjct:  251 LPEGFFDDPEMDAKSRGVDLKAEKKEEEQNEWKEFMSFAEEVKKTEKEEEQQEEAVEEDKEQYEELEQATMMGRLA-LLMNKSESIITRKRKRAEPARGEAEDEQKDDLEKNSTDSRNGAVAAAEGKEKRQREEEEEEEEEETRPKSRDGSGGGGGGGEKEEVEKSVAKTGTAMREVAVASAPADAAAAEISAMLRGRKRKKKRATEEAFSGEYVPMDPLDWRAR 474          
BLAST of EWM24014.1 vs. NCBI_GenBank
Match: gi|566019341|gb|ETI42252.1| (hypothetical protein F443_12604 [Phytophthora parasitica P1569] >gi|567985300|gb|ETL35644.1| hypothetical protein L916_12251 [Phytophthora parasitica])

HSP 1 Score: 60.077 bits (144), Expect = 7.339e-7
Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 0
Query:  200 PSSPKPETSSASTS--ALPTGFFDDPEADALAHNIDLNAQKEAEARKEWEDFQKFAADVAVAEAGQEAVEEEEWEEEERRKELEHLYYTARLAGLI 293
            P++ +P  S+++    A+P GFFDD  ADA A ++D+    E +   EWE FQ+FAA+V      +E  + EE +E E  ++LE++ Y  R   ++
Sbjct:   35 PTATQPGISASNQVKPAIPAGFFDDSLADAKARSVDVKQLAEKQLESEWEAFQEFAAEVEQQSVQEEKQQVEEIKEREAVEQLENMEYVDRYRVIL 130          
The following BLAST results are available for this feature:
BLAST of EWM24014.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585105301|gb|EWM24014.1|0.000e+0100.00protein of unknown function DUF4151 [Nannochlorops... [more]
gi|298708070|emb|CBJ30423.1|1.748e-935.56hypothetical protein Esi_0189_0054 [Ectocarpus sil... [more]
gi|566019341|gb|ETI42252.1|7.339e-735.42hypothetical protein F443_12604 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6666rna6666Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications