EWM24027.1, cds6646 (CDS) Nannochloropsis gaditana

Overview
NameEWM24027.1
Unique Namecds6646
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:201628..201660 +
Alignment locationCM002469.1:201840..202115 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24027.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100040g10.2025.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:201628..201660 +
CM002469.1supercontigCM002469.1:201840..202115 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24027.1 vs. NCBI_GenBank
Match: gi|585105314|gb|EWM24027.1| (hypothetical protein Naga_100040g10 [Nannochloropsis gaditana])

HSP 1 Score: 216.468 bits (550), Expect = 2.206e-71
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 MILMPPPSENEGEPLTRYNAMMSRRCSAPFQSDHGAWQKAINKNNARAWTTCGHDTARGTWAVCMLACGFKYSTAGVTWKEISISSVRNSLKKEWGQRFRTR 102
            MILMPPPSENEGEPLTRYNAMMSRRCSAPFQSDHGAWQKAINKNNARAWTTCGHDTARGTWAVCMLACGFKYSTAGVTWKEISISSVRNSLKKEWGQRFRTR
Sbjct:    1 MILMPPPSENEGEPLTRYNAMMSRRCSAPFQSDHGAWQKAINKNNARAWTTCGHDTARGTWAVCMLACGFKYSTAGVTWKEISISSVRNSLKKEWGQRFRTR 102
The following BLAST results are available for this feature:
BLAST of EWM24027.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105314|gb|EWM24027.1|2.206e-71100.00hypothetical protein Naga_100040g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6662rna6662Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications