EWM23994.1, cds6642 (CDS) Nannochloropsis gaditana

Overview
NameEWM23994.1
Unique Namecds6642
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:195211..195425 +
Alignment locationCM002469.1:195910..197074 +

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Properties
Property NameValue
Protein idEWM23994.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100040g6.1992.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:195211..195425 +
CM002469.1supercontigCM002469.1:195910..197074 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23994.1 vs. NCBI_GenBank
Match: gi|553184494|ref|XP_005854097.1| (hypothetical protein NGA_0496800 [Nannochloropsis gaditana CCMP526] >gi|422294965|gb|EKU22264.1| hypothetical protein NGA_0496800 [Nannochloropsis gaditana CCMP526] >gi|585105281|gb|EWM23994.1| hypothetical protein Naga_100040g6 [Nannochloropsis gaditana])

HSP 1 Score: 939.102 bits (2426), Expect = 0.000e+0
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0 
Query:    1 MPSRISYLGVAFSLAAASYHFASSFQLRMTVGGGVHQKRRKTLNNQHKVPPSAVDTIKTTKTTEEDTTNKSKHPFLETSPFHCTLYDGLNRPWTKEGARPTTLEGRSWHADMPLPLAKKMIVEAAQDQSVSKEMLMAALHMVEYDAAFEAGAKGGWEVGDLEGEWRLAFNADAPFLESRRDRWGYLIQAQEKEGEAEEEVAVVGLRLDTRASTIVLDSLQEPRPKSFQGTFWKDRGGKVHVDVTRVQLLKAMDPANEEEEAVGEAGGGRLLPESELPLMDAFLRPGSFFEVIQVDKLHLALRYHLGGALESSLLIFNKVVPFSAEAGGLPEGGESVQWREVGSTEAGAGIEDKSAPEAEAEGTHGKDRWGHVKKTNREGQPRYANAEERLQQLRQRRRMLGGYDSFWEYLEEEKVSLFLVLAFPAFVKASPHLLAAAHVKWMLLQEMAGSALQAWGGQS 459
            MPSRISYLGVAFSLAAASYHFASSFQLRMTVGGGVHQKRRKTLNNQHKVPPSAVDTIKTTKTTEEDTTNKSKHPFLETSPFHCTLYDGLNRPWTKEGARPTTLEGRSWHADMPLPLAKKMIVEAAQDQSVSKEMLMAALHMVEYDAAFEAGAKGGWEVGDLEGEWRLAFNADAPFLESRRDRWGYLIQAQEKEGEAEEEVAVVGLRLDTRASTIVLDSLQEPRPKSFQGTFWKDRGGKVHVDVTRVQLLKAMDPANEEEEAVGEAGGGRLLPESELPLMDAFLRPGSFFEVIQVDKLHLALRYHLGGALESSLLIFNKVVPFSAEAGGLPEGGESVQWREVGSTEAGAGIEDKSAPEAEAEGTHGKDRWGHVKKTNREGQPRYANAEERLQQLRQRRRMLGGYDSFWEYLEEEKVSLFLVLAFPAFVKASPHLLAAAHVKWMLLQEMAGSALQAWGGQS
Sbjct:    1 MPSRISYLGVAFSLAAASYHFASSFQLRMTVGGGVHQKRRKTLNNQHKVPPSAVDTIKTTKTTEEDTTNKSKHPFLETSPFHCTLYDGLNRPWTKEGARPTTLEGRSWHADMPLPLAKKMIVEAAQDQSVSKEMLMAALHMVEYDAAFEAGAKGGWEVGDLEGEWRLAFNADAPFLESRRDRWGYLIQAQEKEGEAEEEVAVVGLRLDTRASTIVLDSLQEPRPKSFQGTFWKDRGGKVHVDVTRVQLLKAMDPANEEEEAVGEAGGGRLLPESELPLMDAFLRPGSFFEVIQVDKLHLALRYHLGGALESSLLIFNKVVPFSAEAGGLPEGGESVQWREVGSTEAGAGIEDKSAPEAEAEGTHGKDRWGHVKKTNREGQPRYANAEERLQQLRQRRRMLGGYDSFWEYLEEEKVSLFLVLAFPAFVKASPHLLAAAHVKWMLLQEMAGSALQAWGGQS 459
The following BLAST results are available for this feature:
BLAST of EWM23994.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|553184494|ref|XP_005854097.1|0.000e+0100.00hypothetical protein NGA_0496800 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6658rna6658Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications