EWM24030.1, cds6641 (CDS) Nannochloropsis gaditana

Overview
NameEWM24030.1
Unique Namecds6641
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:194528..194551 -
Alignment locationCM002469.1:192895..194334 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24030.1
Productruvb-like 2
Orig transcript idgnl|cribi|Naga_100040g5.2028.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:194528..194551 -
CM002469.1supercontigCM002469.1:192895..194334 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0043141ATP-dependent 5'-3' DNA helicase activity
GO:0003678DNA helicase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR027238RuvB-like
IPR010339TIP49_C
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|553184477|ref|XP_005854093.1| (hypothetical protein NGA_0496400 [Nannochloropsis gaditana CCMP526] >gi|422294961|gb|EKU22260.1| hypothetical protein NGA_0496400 [Nannochloropsis gaditana CCMP526] >gi|585105317|gb|EWM24030.1| ruvb-like 2 [Nannochloropsis gaditana])

HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0
Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0
Query:    1 MADLGLGKETTKDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGGGAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELGGDDMEEEEEEEEEEEGEKAAVGEGREGAADMAED 487
            MADLGLGKETTKDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGGGAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELGGDDMEEEEEEEEEEEGEKAAVGEGREGAADMAED
Sbjct:    1 MADLGLGKETTKDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGGGAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELGGDDMEEEEEEEEEEEGEKAAVGEGREGAADMAED 487          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|299471826|emb|CBN79493.1| (RuvB-like 2 [Ectocarpus siliculosus])

HSP 1 Score: 788.875 bits (2036), Expect = 0.000e+0
Identity = 386/452 (85.40%), Postives = 423/452 (93.58%), Query Frame = 0
Query:    2 ADLGLGKETTKDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGGGAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELG 453
            AD+ LG    +DLTRIERIGAHSHIRGLGLDD+LEPR+VSQG+VGQ  ARRA G++YKMI+EG+IAGRAILLAG+PGTGKTA+AMGLAQALG  TPFTTIAGSEIFSLEMSKTEA+TQAFRRSIGV+IMEETEIIEGEVVE+QVDTP GGG KTGR+TLCTTEMETVYDLGAKMIEALQKEKV AGDV+TIDKASGKI+KLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKE VHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQID+KVAEWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALES LAPVLI+ATNRG+A+IRGT YKSPHGIPIDLLDRLMI+ST  Y+E EV++IL IRCEEEDVEM DDA+ LLTKI ME SLRYAIHMIMAA LV+ KRK  +V+++DIK+VYSLFVD+KRSTQFL+EYQ++FMFN LG
Sbjct:    4 ADVSLGNTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDVSQGLVGQHAARRATGVIYKMIQEGQIAGRAILLAGKPGTGKTAIAMGLAQALGPDTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPVGGGDKTGRVTLCTTEMETVYDLGAKMIEALQKEKVGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDLKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESHLAPVLIIATNRGIAKIRGTNYKSPHGIPIDLLDRLMIVSTVAYSEQEVKKILSIRCEEEDVEMDDDAIILLTKIAMETSLRYAIHMIMAAQLVSTKRKGTQVEIEDIKKVYSLFVDIKRSTQFLMEYQKDFMFNTLG 455          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|673034542|ref|XP_008871232.1| (RuvB-like 2 [Aphanomyces invadans] >gi|574473203|gb|ETW00207.1| RuvB-like 2 [Aphanomyces invadans])

HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0
Identity = 379/442 (85.75%), Postives = 411/442 (92.99%), Query Frame = 0
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGG-GAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNEL 452
            +D+TRIERIGAHSHIRGLGLDDALEPR VSQGMVGQT AR+AAGIV +MI+EGKIAGRAILLAG+PGTGKTA+AMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDTP GG G K GR+TL TTEMETVYDLGAKMI+ L KEK+ AGDVITI+K SGKISKLGRSFTRS+DYDAMGPQTRFVQCPEGELQKRKE VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KV+EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMIIST PY+E++VR+IL IRCEEEDVEM+DDA +LLT+I ME SLRYAIH+IM ASLV  KRK  EVDV DIK+VYSLFVDVKRSTQFL+EYQ EFMFNE+
Sbjct:   29 RDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTDARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGAGDKIGRLTLRTTEMETVYDLGAKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYSESDVRKILNIRCEEEDVEMTDDAKDLLTRIAMETSLRYAIHVIMTASLVCTKRKGTEVDVADIKKVYSLFVDVKRSTQFLMEYQHEFMFNEI 470          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|698796382|ref|XP_009831220.1| (RuvB-like 2 [Aphanomyces astaci] >gi|574113890|gb|ETV79379.1| RuvB-like 2 [Aphanomyces astaci])

HSP 1 Score: 783.867 bits (2023), Expect = 0.000e+0
Identity = 379/442 (85.75%), Postives = 410/442 (92.76%), Query Frame = 0
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGG-GAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNEL 452
            +D+TRIERIGAHSHIRGLGLDDALEPR VSQGMVGQT AR+AAGIV +MI+EGKIAGRAILLAG+PGTGKTA+AMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDTP GG G K GR+TL TTEMETVYDLGAKMI+ L KEK+ AGDVITI+K SGKISKLGRSFTRS+DYDAMGPQTRFVQCPEGELQKRKE VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KV+EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMIIST PY E++VR+IL IRCEEEDVEMSDDA +LLT+I ME SLRYAIH+IM ASLV  KRK  EV+V DIK+VYSLFVDVKRSTQFL+EYQ EFMFNE+
Sbjct:   10 RDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTDARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGAGDKIGRLTLRTTEMETVYDLGAKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYTESDVRKILNIRCEEEDVEMSDDAKDLLTRIAMETSLRYAIHVIMTASLVCTKRKGTEVEVVDIKKVYSLFVDVKRSTQFLMEYQHEFMFNEI 451          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|1173949113|gb|OQR97185.1| (hypothetical protein ACHHYP_12609 [Achlya hypogyna])

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 378/443 (85.33%), Postives = 408/443 (92.10%), Query Frame = 0
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGG-GAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELG 453
            +D+TRIERIGAHSHIRGLGLDDALEPR VSQGMVGQT AR+AAGIV +MI+EGKIAGRAILLAG+PGTGKTA+AMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIG+RIMEETEIIEGEVVE+QVDTP G  G K GR+TL TTEMETVYDLG KMI+ L KEK+ AGDVITI+K SGKISKLGRSFTRS+DYDAMGP TRFVQCPEGELQKRKE VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KV EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMIIST PY+EAEVR+IL IRCEEEDVEM+DDA +LLT+I ME SLRYAIH+IM ASLVA KRK  EVDV DIK+VYSLFVDVKRSTQFL+EYQ EFMFNE+ 
Sbjct:   10 RDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTEARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGIRIMEETEIIEGEVVEIQVDTPTGSVGEKVGRLTLRTTEMETVYDLGTKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPSTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVNEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYSEAEVRKILNIRCEEEDVEMTDDAKDLLTRIAMETSLRYAIHIIMTASLVATKRKGTEVDVADIKKVYSLFVDVKRSTQFLMEYQHEFMFNEVN 452          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|669146772|ref|XP_008608948.1| (RuvB-like 2 [Saprolegnia diclina VS20] >gi|530739186|gb|EQC37428.1| RuvB-like 2 [Saprolegnia diclina VS20])

HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0
Identity = 377/443 (85.10%), Postives = 408/443 (92.10%), Query Frame = 0
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGG-GAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELG 453
            +D+TRIERIGAHSHIRGLGLDDALEPR VSQGMVGQT AR+AAGIV +MI+EGKIAGRAILLAG+PGTGKTA+AMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIG+RIMEETEIIEGEVVE+QVDTP G  G K GR+TL TTEMETVYDLG KMI+ L KEK+ AGDVITI+K SGKISKLGRSFTRS+DYDAMGPQTRFVQCPEGELQKRKE VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KV EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMIIST PY+EA+VR+IL IRCEEEDVEM+DDA +LLT+I ME SLRYAIH+IM ASLV  KRK  EVDV DIK+VYSLFVDVKRSTQFL+EYQ EFMFNE+ 
Sbjct:   10 RDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTEARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGIRIMEETEIIEGEVVEIQVDTPTGSVGDKVGRLTLRTTEMETVYDLGTKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVNEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYSEADVRKILNIRCEEEDVEMTDDAKDLLTRIAMETSLRYAIHIIMTASLVCTKRKGTEVDVADIKKVYSLFVDVKRSTQFLMEYQHEFMFNEIN 452          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|325191169|emb|CCA25957.1| (ruvBlike 2 putative [Albugo laibachii Nc14])

HSP 1 Score: 768.074 bits (1982), Expect = 0.000e+0
Identity = 377/450 (83.78%), Postives = 410/450 (91.11%), Query Frame = 0
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGG-GAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELGGDDMEEE 460
            KD+TRIERIG HSHIRGLGLDD+LEPR VSQGMVGQ  AR+AAGIV KMI+EG IAGRAILLAG+PGTGKTA+AM +A ALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDTP GG G K GR+TL TTEMETVYDLGAKMI+AL KEKV AGDV+TI K +GKI+KLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKE VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KVAEWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESD+APVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T  Y+E E+R+IL IRCEEEDVEMS+DA +LLT+I +E SLRYAIHMI+A+SLV  KRK  EVDV DIKRVYSLFVD+KRSTQFL+EYQ+EFMFNE+  DD EEE
Sbjct:  182 KDITRIERIGTHSHIRGLGLDDSLEPRGVSQGMVGQKDARKAAGIVAKMIEEGNIAGRAILLAGRPGTGKTAIAMAIAHALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGTGDKIGRLTLRTTEMETVYDLGAKMIDALTKEKVEAGDVVTISKETGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDQKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIIPTQSYSEDEMRKILTIRCEEEDVEMSEDAKDLLTRIAVETSLRYAIHMIIASSLVCAKRKGTEVDVSDIKRVYSLFVDLKRSTQFLMEYQREFMFNEI--DDDEEE 629          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|635363972|emb|CCI47554.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 766.533 bits (1978), Expect = 0.000e+0
Identity = 371/447 (83.00%), Postives = 407/447 (91.05%), Query Frame = 0
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGG-GAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELGGDDM 457
            KD+TRIERIG HSHIRGLGLDD+LEPR VSQGMVGQ  AR+AAGIV KMI+EG IAGRAILLAG+PGTGKTA+AM +AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDTP GG G K GR+TL TTEMETVYDLGAKMI++L KEK+ AGDV+TI K +GKI+KLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKE VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KVAEWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESD+APVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T  Y+E E+R+IL IRCEEEDVEMS+DA +LLT+I +E SLRYAIHMI+A+SLV  KRK  EVDV DIKRVYSLFVD+KRSTQFL+EYQ+EFMFNE+   + 
Sbjct:   12 KDITRIERIGTHSHIRGLGLDDSLEPRGVSQGMVGQKDARKAAGIVAKMIEEGNIAGRAILLAGRPGTGKTAIAMAVAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGTGDKIGRLTLRTTEMETVYDLGAKMIDSLTKEKIEAGDVVTISKETGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDQKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIIPTKSYSEDEMRKILTIRCEEEDVEMSEDAKDLLTRIAVETSLRYAIHMIIASSLVCTKRKGTEVDVSDIKRVYSLFVDLKRSTQFLMEYQREFMFNEVSSRNF 458          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|1126214805|ref|XP_019641336.1| (PREDICTED: ruvB-like 2 [Branchiostoma belcheri])

HSP 1 Score: 751.51 bits (1939), Expect = 0.000e+0
Identity = 355/442 (80.32%), Postives = 404/442 (91.40%), Query Frame = 0
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGG-GAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNEL 452
            +++TRIERIGAHSHIRGLGLDDALEPR+VSQGMVGQ  ARRAAG++ +MIKEGKIAGRA+L+ GQPGTGKTA+AMG+AQALG+ TPFT +AGSEIFSLEMSKTEA+TQAFR+SIG+RI EETEIIEGEVVEVQ+D PA G GAK G++TL TTEMET+YDLG KMIE+L KEKV+AGD+ITIDKA+GKI+KLGRSFTR+RDYDAMGPQT+FVQCPEGELQKRKE VH V+LHEIDVINSR QGFLALF+GDTGEIK EVREQI+ KVAEWREEGKA +VPGVLFIDEVHMLDIECFS+LNRALE+D+AP+LIMATNRG+ +IRGT YKSPHGIPIDLLDRL+I+ST+PY+E E+R+IL IRCEEEDVEMSDDA  +LTKIGME SLRY+I +I AA+LV  KRK  EV V DIKRVYSLF+D  RSTQFL EYQQEFMFNE+
Sbjct:   14 REVTRIERIGAHSHIRGLGLDDALEPRQVSQGMVGQLAARRAAGVILEMIKEGKIAGRAVLIGGQPGTGKTAIAMGMAQALGQDTPFTAMAGSEIFSLEMSKTEALTQAFRKSIGIRIKEETEIIEGEVVEVQIDRPATGTGAKVGKLTLKTTEMETIYDLGTKMIESLTKEKVAAGDIITIDKATGKITKLGRSFTRARDYDAMGPQTKFVQCPEGELQKRKEVVHTVTLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKADIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILIMATNRGITRIRGTNYKSPHGIPIDLLDRLLIVSTSPYSEKEIRQILTIRCEEEDVEMSDDATTILTKIGMETSLRYSIQLITAANLVCRKRKGTEVSVDDIKRVYSLFLDELRSTQFLKEYQQEFMFNEM 455          
BLAST of EWM24030.1 vs. NCBI_GenBank
Match: gi|762103698|ref|XP_011434376.1| (PREDICTED: ruvB-like 2 isoform X1 [Crassostrea gigas])

HSP 1 Score: 749.969 bits (1935), Expect = 0.000e+0
Identity = 359/445 (80.67%), Postives = 405/445 (91.01%), Query Frame = 0
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGG-GAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELGGD 455
            +++TRIERIGAHSHIRGLGLDDAL+ R VSQGMVGQT ARRAAG++ +MIKEGKIAGRA+L+AG PGTGKTA+AMG+AQALG  TPFT+IAGSEIFSLEMSKTEA+TQAFR+SIGVRI EETEIIEGEVVE+Q+D PA G GAK G++TL TTEMET+YDLG KMIE+L KEKV AGD+ITIDKA+GKI+KLGRSFTR+RDYDAMG QT+FVQCPEGELQKRKE VH V+LHEIDVINSR QGFLALF+GDTGEIKGEVREQI+ KVAEWREEGKA +VPGVLFIDEVHMLDIECFS+LNRALESD+AP+LIMATNRG+ +IRGT Y+SPHGIPIDLLDRL+IISTTPY E E+++IL IRCEEEDVEMSD+AL +LT+IGME SLRYAI +I  A+LV+ KRK  EVDV DIKRVYSLF+D  RSTQFL EYQQEFMFNELG D
Sbjct:   13 REVTRIERIGAHSHIRGLGLDDALDARNVSQGMVGQTEARRAAGVILEMIKEGKIAGRAVLIAGHPGTGKTAIAMGMAQALGTDTPFTSIAGSEIFSLEMSKTEALTQAFRKSIGVRIKEETEIIEGEVVEIQIDRPATGTGAKVGKLTLKTTEMETIYDLGQKMIESLTKEKVQAGDIITIDKATGKITKLGRSFTRARDYDAMGAQTKFVQCPEGELQKRKEVVHTVTLHEIDVINSRTQGFLALFSGDTGEIKGEVREQINSKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALESDMAPILIMATNRGITRIRGTQYQSPHGIPIDLLDRLLIISTTPYQEKEIKQILTIRCEEEDVEMSDEALIVLTRIGMETSLRYAIQLITTANLVSRKRKGTEVDVDDIKRVYSLFLDESRSTQFLKEYQQEFMFNELGVD 457          
The following BLAST results are available for this feature:
BLAST of EWM24030.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553184477|ref|XP_005854093.1|0.000e+0100.00hypothetical protein NGA_0496400 [Nannochloropsis ... [more]
gi|299471826|emb|CBN79493.1|0.000e+085.40RuvB-like 2 [Ectocarpus siliculosus][more]
gi|673034542|ref|XP_008871232.1|0.000e+085.75RuvB-like 2 [Aphanomyces invadans] >gi|574473203|g... [more]
gi|698796382|ref|XP_009831220.1|0.000e+085.75RuvB-like 2 [Aphanomyces astaci] >gi|574113890|gb|... [more]
gi|1173949113|gb|OQR97185.1|0.000e+085.33hypothetical protein ACHHYP_12609 [Achlya hypogyna... [more]
gi|669146772|ref|XP_008608948.1|0.000e+085.10RuvB-like 2 [Saprolegnia diclina VS20] >gi|5307391... [more]
gi|325191169|emb|CCA25957.1|0.000e+083.78ruvBlike 2 putative [Albugo laibachii Nc14][more]
gi|635363972|emb|CCI47554.1|0.000e+083.00unnamed protein product [Albugo candida][more]
gi|1126214805|ref|XP_019641336.1|0.000e+080.32PREDICTED: ruvB-like 2 [Branchiostoma belcheri][more]
gi|762103698|ref|XP_011434376.1|0.000e+080.67PREDICTED: ruvB-like 2 isoform X1 [Crassostrea gig... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6657rna6657Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications