EWM30009.1, cds664 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|585112627|gb|EWM30009.1| (pp-loop domain protein [Nannochloropsis gaditana]) HSP 1 Score: 141.739 bits (356), Expect = 8.858e-43 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQVGGRAGGRAGGREKGGRNSKGRRGRSTSMAL 71 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQVGGRAGGRAGGREKGGRNSKGRRGRSTSMAL Sbjct: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQVGGRAGGRAGGREKGGRNSKGRRGRSTSMAL 71
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|1173954103|gb|OQS01596.1| (hypothetical protein ACHHYP_00577 [Achlya hypogyna]) HSP 1 Score: 79.337 bits (194), Expect = 1.112e-15 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQV 41 MKRGLLYTCC +NGYNKL+LAQHLDDL ES FMS M+NGQV Sbjct: 800 MKRGLLYTCCRKNGYNKLVLAQHLDDLAESFFMSAMYNGQV 840
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|813185857|ref|XP_012207100.1| (hypothetical protein SPRG_12658 [Saprolegnia parasitica CBS 223.65] >gi|641527901|gb|KDO22160.1| hypothetical protein SPRG_12658 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 79.337 bits (194), Expect = 1.112e-15 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQV 41 MKRGLLYTCC +NGYNKL+LAQHLDDL ES FMS M+NGQV Sbjct: 798 MKRGLLYTCCRKNGYNKLVLAQHLDDLAESFFMSAMYNGQV 838
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|669158542|ref|XP_008614833.1| (hypothetical protein SDRG_10614 [Saprolegnia diclina VS20] >gi|530733584|gb|EQC31826.1| hypothetical protein SDRG_10614 [Saprolegnia diclina VS20]) HSP 1 Score: 77.7962 bits (190), Expect = 3.989e-15 Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQV 41 MKRGLLYTCC +NGYNKL+L QHLDDL ES FMS M+NGQV Sbjct: 815 MKRGLLYTCCRKNGYNKLVLGQHLDDLAESFFMSAMYNGQV 855
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|298708709|emb|CBJ49206.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.485 bits (184), Expect = 2.733e-14 Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQV 41 MKRGLLY CC E GYNKL+LAQHLDDL ES MS +HNGQV Sbjct: 979 MKRGLLYACCREQGYNKLVLAQHLDDLAESFIMSALHNGQV 1019
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|953500112|emb|CEG38753.1| (hypothetical protein L914_16740 [Plasmopara halstedii]) HSP 1 Score: 75.0998 bits (183), Expect = 3.944e-14 Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQV 41 MKRGLLYTCC G+NKL+LAQHLDDL ES FMS MHNGQ+ Sbjct: 848 MKRGLLYTCCRNFGFNKLVLAQHLDDLAESFFMSAMHNGQL 888
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|298706813|emb|CBJ34231.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.9366 bits (167), Expect = 7.701e-14 Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQ 40 MKRGLLY CC E GYNKL+LAQHLDDL ES MS +HNGQ Sbjct: 1 MKRGLLYACCREQGYNKLVLAQHLDDLAESFIMSALHNGQ 40
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|695408750|ref|XP_009524736.1| (hypothetical protein PHYSODRAFT_557789 [Phytophthora sojae] >gi|348682203|gb|EGZ22019.1| hypothetical protein PHYSODRAFT_557789 [Phytophthora sojae]) HSP 1 Score: 73.9442 bits (180), Expect = 9.870e-14 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQV 41 MKRG+LYTCC + G+NKL+LAQHLDDL ES FMS MHNGQ+ Sbjct: 877 MKRGVLYTCCRKYGFNKLVLAQHLDDLAESFFMSAMHNGQL 917
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|1173945389|gb|OQR94019.1| (cysteine desulfurase [Thraustotheca clavata]) HSP 1 Score: 73.559 bits (179), Expect = 1.233e-13 Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQV 41 MKRGLLYTCC N YNKL+LAQHLDDL ES MS M+NGQV Sbjct: 814 MKRGLLYTCCRTNNYNKLVLAQHLDDLAESFIMSAMYNGQV 854
BLAST of EWM30009.1 vs. NCBI_GenBank
Match: gi|1214682733|gb|OWZ00908.1| (hypothetical protein PHMEG_00027801 [Phytophthora megakarya]) HSP 1 Score: 73.1738 bits (178), Expect = 1.896e-13 Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0 Query: 1 MKRGLLYTCCVENGYNKLLLAQHLDDLVESLFMSLMHNGQV 41 MKRG+LY+CC + G+NKL+LAQHLDDL ES FMS MHNGQ+ Sbjct: 862 MKRGVLYSCCRKYGFNKLVLAQHLDDLAESFFMSAMHNGQL 902 The following BLAST results are available for this feature:
BLAST of EWM30009.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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