EWM24047.1, cds6627 (CDS) Nannochloropsis gaditana

Overview
NameEWM24047.1
Unique Namecds6627
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:158416..159486 -

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Properties
Property NameValue
Protein idEWM24047.1
ProductConcanavalin A-like lectin/glucanase, subgroup
Orig transcript idgnl|cribi|Naga_100280g5.2296.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:158416..159486 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0030246carbohydrate binding
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR000757Glyco_hydro_16
IPR013320ConA-like_dom
Homology
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BLAST of EWM24047.1 vs. NCBI_GenBank
Match: gi|585105338|gb|EWM24047.1| (Concanavalin A-like lectin/glucanase, subgroup [Nannochloropsis gaditana])

HSP 1 Score: 745.347 bits (1923), Expect = 0.000e+0
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0 
Query:    1 MSELSDNDVFRCHPSLSIKSIAWLCFVLIARSASIEQENVLCPSLRSGPTLYSSSDIFSTDFTEQNQVQSFLSENYGRVNTDGVLACRRSDHLLYNTSMSGAGLETDVRGLRIVMDNNGGAVCDHNSEIATGHLLTRFYLQEGRIDLTARMGYGPDAAPRYHSEDSFSCLGLYVHQSVSQHGYRNEISMCVSSKDPSTVRMGVWNGSPADQEEARQAKTSMDLSQAFHTYSIEWTASRVRFWLDDLKLWDMPGQRFCAGVHAAKIDAGMSQGRRLPYEPMSVRIILRPLGIRYKATTYMDATKFSYFPLVQAEEESEPVFHVSAGTSLTTEGLGKARGLGNLWQLLSMCVIIVYFI 356
            MSELSDNDVFRCHPSLSIKSIAWLCFVLIARSASIEQENVLCPSLRSGPTLYSSSDIFSTDFTEQNQVQSFLSENYGRVNTDGVLACRRSDHLLYNTSMSGAGLETDVRGLRIVMDNNGGAVCDHNSEIATGHLLTRFYLQEGRIDLTARMGYGPDAAPRYHSEDSFSCLGLYVHQSVSQHGYRNEISMCVSSKDPSTVRMGVWNGSPADQEEARQAKTSMDLSQAFHTYSIEWTASRVRFWLDDLKLWDMPGQRFCAGVHAAKIDAGMSQGRRLPYEPMSVRIILRPLGIRYKATTYMDATKFSYFPLVQAEEESEPVFHVSAGTSLTTEGLGKARGLGNLWQLLSMCVIIVYFI
Sbjct:    1 MSELSDNDVFRCHPSLSIKSIAWLCFVLIARSASIEQENVLCPSLRSGPTLYSSSDIFSTDFTEQNQVQSFLSENYGRVNTDGVLACRRSDHLLYNTSMSGAGLETDVRGLRIVMDNNGGAVCDHNSEIATGHLLTRFYLQEGRIDLTARMGYGPDAAPRYHSEDSFSCLGLYVHQSVSQHGYRNEISMCVSSKDPSTVRMGVWNGSPADQEEARQAKTSMDLSQAFHTYSIEWTASRVRFWLDDLKLWDMPGQRFCAGVHAAKIDAGMSQGRRLPYEPMSVRIILRPLGIRYKATTYMDATKFSYFPLVQAEEESEPVFHVSAGTSLTTEGLGKARGLGNLWQLLSMCVIIVYFI 356
The following BLAST results are available for this feature:
BLAST of EWM24047.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105338|gb|EWM24047.1|0.000e+0100.00Concanavalin A-like lectin/glucanase, subgroup [Na... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6643rna6643Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications