EWM24049.1, cds6626 (CDS) Nannochloropsis gaditana

Overview
NameEWM24049.1
Unique Namecds6626
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:157671..157822 +
Alignment locationCM002469.1:157880..158195 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24049.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100280g4.2298.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:157671..157822 +
CM002469.1supercontigCM002469.1:157880..158195 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24049.1 vs. NCBI_GenBank
Match: gi|585105340|gb|EWM24049.1| (hypothetical protein Naga_100280g4 [Nannochloropsis gaditana])

HSP 1 Score: 325.479 bits (833), Expect = 6.758e-113
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 
Query:    1 MGNAKAYKSKETKLHGMPQRWVGVRRAAHDTGRDGACYGIGDGECKAEWDNIDCLHIEFIAWCTQLFRGFIGKTSRANDILVKVKAMALPELMFVGGLRTIPGVPYLSLSLFLLSLQVPRSMHTAKMCVRGALTDRSRRDQVKSKTQRHETTVTV 155
            MGNAKAYKSKETKLHGMPQRWVGVRRAAHDTGRDGACYGIGDGECKAEWDNIDCLHIEFIAWCTQLFRGFIGKTSRANDILVKVKAMALPELMFVGGLRTIPGVPYLSLSLFLLSLQVPRSMHTAKMCVRGALTDRSRRDQVKSKTQRHETTVTV
Sbjct:    1 MGNAKAYKSKETKLHGMPQRWVGVRRAAHDTGRDGACYGIGDGECKAEWDNIDCLHIEFIAWCTQLFRGFIGKTSRANDILVKVKAMALPELMFVGGLRTIPGVPYLSLSLFLLSLQVPRSMHTAKMCVRGALTDRSRRDQVKSKTQRHETTVTV 155
The following BLAST results are available for this feature:
BLAST of EWM24049.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105340|gb|EWM24049.1|6.758e-113100.00hypothetical protein Naga_100280g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6642rna6642Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications