EWM24066.1, cds6617 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|585105358|gb|EWM24066.1| (ribosomal rna large subunit methyltransferase i [Nannochloropsis gaditana]) HSP 1 Score: 1053.12 bits (2722), Expect = 0.000e+0 Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0
Query: 1 MRRSLFVSALGLTTSLSLLLATRRAAAFALPAIPFFHSSRGWTSVIPVRDQSATARAHKSSRKGGQYSVREGQEHRTSTRPRARETEVEPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
MRRSLFVSALGLTTSLSLLLATRRAAAFALPAIPFFHSSRGWTSVIPVRDQSATARAHKSSRKGGQYSVREGQEHRTSTRPRARETEVEPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF
Sbjct: 1 MRRSLFVSALGLTTSLSLLLATRRAAAFALPAIPFFHSSRGWTSVIPVRDQSATARAHKSSRKGGQYSVREGQEHRTSTRPRARETEVEPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|922869979|gb|KOO35971.1| (ribosomal RNA large subunit methyltransferase i-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 326.25 bits (835), Expect = 5.494e-103 Identity = 194/449 (43.21%), Postives = 261/449 (58.13%), Query Frame = 0
Query: 101 VVLRAGKARLFLE-GNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYAS-SLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKA------------------------EARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDL-----GKTGEKA-------FDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
V L+AGKARLF G+PLV+ AV +V+G G V+VVD + L+G G +N SMYRVRLL E AL A L +++ R+ A R AL LP+ ETT +RL+N EGD+LSGL DVF V +S++W E+ D +++ L A P VWRRS+ RL+QDG+ P + + ++ + V E+G+KY V P LGQK+GFYCDQR NR+ + L R KRVLDLFCY+GGF+L+AAR GAR +GVDSS LA++ A NA N E F ++DV + R + G+ G+ A D+VI DPPKLAP+ +DLPRA+ KY K N R + GGL+L+ TCSAA+TQ F KM+ +AA + GR++T+L+V+ A HV P ES+YLTA+L V
Sbjct: 35 VRLQAGKARLFKNAGHPLVFSGAVDKVLGDPEPGAIVDVVDGKDGLVGWGVFNPHSMYRVRLLATPEEP--ALIAHRDLRKLISHRLEAALKLRAALSLPSPETTAYRLINSEGDRLSGLTVDVFGGTAVAVTSAMWLEQRSDMVVECLRAL--PGITEVVWRRSDGRLQQDGWEVPNAKVEEVEEHQSLTDDSPTAHASAPAHASAPAPAAQPSPPPPLPVLIYESGVKYLVAPVLGQKSGFYCDQRDNRRQLAELCRDKRVLDLFCYSGGFSLSAARAGARRCVGVDSSGLALDLARRNAALNGFEAQCEFIQADVDKFLRAVHLPGGGQEGDVAGASDAREVDVVICDPPKLAPSVKDLPRAIPKYRKFNGLAMRSLRPGGLLLSCTCSAAMTQS-GGFVKMLHEAAWEQGRALTVLRVTGPAADHVIHPACPESSYLTAVLAFVL 478
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|676380505|ref|XP_009033531.1| (hypothetical protein AURANDRAFT_2373, partial [Aureococcus anophagefferens] >gi|323455833|gb|EGB11701.1| hypothetical protein AURANDRAFT_2373, partial [Aureococcus anophagefferens]) HSP 1 Score: 308.531 bits (789), Expect = 4.137e-97 Identity = 190/416 (45.67%), Postives = 243/416 (58.41%), Query Frame = 0
Query: 101 VVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWH--AREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGL-EASLGPAGIS---TVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAV 510
V L GK++LF +GNPL++ AV G GD V+VVD +G G YN SMYRVRLL A E EA ++++ ++ A + R+AL LP A+T FR VN EGD LSGL D F V V S++W E + + L EA G GIS +WRR+EARL+QDG+ D +A+ G AKE GL Y+V GQKTGFYCDQR NR + L GK VLDL+CY+GGFALNAA+ GA EA GVDSSA A++ A NA AN L+ A F ++DV + K + +D+V+ DPPKLAP+ + LPRA KY KIN V GGL+LT TCS+A+T F +V AA D GR +T+L+ S AA H P + E YLTA+L+ V
Sbjct: 1 VTLGRGKSKLFRKGNPLIFAGAVSSTAGDPQRGDVVDVVDGANQNVGWGTYNPDSMYRVRLLGRGGAAETNEARVGAAVKALL----GAAASRRRALDLPRADTDVFRFVNSEGDGLSGLTVDAFGDVLVCQISAVWLESRRAVVEAALREAYEGLTGISDARVLWRRAEARLRQDGW-----------DGEADEMASGDRFAAKEGGLAYEV-DVFGQKTGFYCDQRDNRAFLGPLCAGKSVLDLYCYSGGFALNAAKHGATEARGVDSSATAVDLARRNAAANGLDACA-FEEADVSAWL----KASDARYDVVVCDPPKLAPSAKTLPRATRKYQKINALALGAVKRGGLLLTCTCSSAMTT-SGNFLGVVHDAALDAGRQVTVLRTSGAAADHPIHPAFAEGAYLTAVLLHV 394
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|546299915|ref|XP_005710961.1| (unnamed protein product [Chondrus crispus] >gi|507107134|emb|CDF40667.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 297.745 bits (761), Expect = 3.090e-91 Identity = 187/420 (44.52%), Postives = 244/420 (58.10%), Query Frame = 0
Query: 101 VVLRAGKARLFLEG-NPLVYGEAVHEVV---GH-VADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGE---ALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYP---ELGQKTGFYCDQRQNRQMIQSL--SRG--KRVLDLFCYTGGFALNAARGGAR-EAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLT 504
VVL+ GKA LF + NP+V+ +V + GH ++D D V V + +G G +N SM+RVR+L H E L +IVAR + A A R+A+ LP T +R+VNGEGD+LSGL D VVSSS+LWCE+HKD II GL A L P+ VWRR+ RL+QDG D EA PA GA + +KY++ GQKTG Y DQR+NR I++L RG KRVLDLFCYTGGFA+NAA G + +DSS AIE NA N + TF +SDV+ Y R + + +FD+VI DPPK AP + LPRA HKY +N A RMV GGL+ T +CSAA+TQ+ F +++ +AA +GR +T+L+ AA H +P ES YLT
Sbjct: 119 VVLKRGKANLFRDQRNPMVFAGSVERHIPLPGHTLSDCDPVAVCNGAYACLGYGFFNPHSMFRVRMLKHVAPSDELDPPLPWDYAAEIVAR-MRNAVALREAIALPGEATNIYRVVNGEGDRLSGLVVDRVADTLVVSSSALWCEKHKDRIIGGLNAVL-PSCADIVWRRNVDRLRQDGLAD--EAEHPA-------PLNGASTSPTDCDVKYELSRFALTRGQKTGHYADQRENRAFIRNLVNQRGGSKRVLDLFCYTGGFAMNAALGSDDCSVVAIDSSGRAIEMGQRNAELNGVSDKITFVQSDVIKYLRS-AEEDQGSFDVVIVDPPKYAPNVKALPRATHKYRSLNLAAMRMVKQGGLLCTCSCSAAMTQNRHLFVEVIREAASSLGREVTLLKTVGAASDHPVTPEMPESEYLT 526
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|966475873|ref|WP_058506606.1| (class I SAM-dependent rRNA methyltransferase [Legionella quinlivanii] >gi|962267612|gb|KTD51642.1| SAM-dependent methyltransferase [Legionella quinlivanii] >gi|1090728920|emb|SEF61667.1| 23S rRNA (cytosine1962-C5)-methyltransferase [Legionella quinlivanii DSM 21216]) HSP 1 Score: 290.041 bits (741), Expect = 5.270e-90 Identity = 166/413 (40.19%), Postives = 242/413 (58.60%), Query Frame = 0
Query: 99 PHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
P V L K L G+P ++ +A+ + G + G+ V+V+ H+G I G YN S+YRVR+L ++++ + S DI+ RR+ AW R+AL LPNAET FRL N EGD LSGL D F+ VCVVSSS+ W E++++ I + + S +W L QDG+ E +I+++AE EAG+ ++V QKTG + DQR+N Q + +L++GKRVLDL+ YTGGFAL+AA+ GA + +DSS AI A NA N L+ F + D Y L K G+ +DIV+ DPPKL P++++L RA + Y ++R VF+ ++SG L++T CS+A++ +EF +VT A VG+ +L VS A CH + E NYLTA+L+AV
Sbjct: 3 PSVHLIESKQTSVLRGHPWIFPKAIAKTKGKLTTGELVDVISHQGEKICTGVYNEHSLYRVRVLDYSKDSD--MNRLSFADIIKRRLHQAWTVRKALNLPNAETNAFRLCNSEGDGLSGLTIDYFNTVCVVSSSAYWVEKNRELITECINEFTQCQ--SLIWLSQAKPLAQDGWPQVE---NKSIELQAEVL---------EAGVLFEVDFSQPQKTGLFLDQRENHQRVAALAKGKRVLDLYTYTGGFALHAAKAGASQVTAIDSSEQAILQASRNAALNQLDS-IEFIEDDARNY---LSKAGD--YDIVVLDPPKLIPSKQNLQRAKNYYRFLHREVFKAMSSGSLLMTCNCSSAIS--AQEFAALVTAQASAVGKEARVLGVSGPASCHPVLSAFPEGNYLTAVLLAVL 391
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|551678914|ref|XP_005842209.1| (hypothetical protein GUITHDRAFT_131479 [Guillardia theta CCMP2712] >gi|428186379|gb|EKX55229.1| hypothetical protein GUITHDRAFT_131479 [Guillardia theta CCMP2712]) HSP 1 Score: 293.123 bits (749), Expect = 1.531e-89 Identity = 177/443 (39.95%), Postives = 249/443 (56.21%), Query Frame = 0
Query: 101 VVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYAS--SLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAE-------------ARKEGA-YVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAM---------------ENARANDLEGHATFCKSDVLVY-ARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
VVL+ GK++LF +GNP+V+G AV G L+G G YNS SMYRVR+LW G++ ++ +I+ +R++ A A R AL LP+ ET +RL+NGEGD+LSG+A DV+ V+SSS+ W E HKD I++ ++A + P VWR+S RL+QDGF P A R D + + ++E A E G+K+ V P+LGQKTG Y DQR NR ++ L +GK VLD FCY+GGF+L+AA GA VDSS A++ A NA N + + K+DV + +GK + +D+VI DPPKLAP+R+DL RA KY K+N+A + V GGL+L+ TCSAA+ Q E ++ A ++GR +T+L+V A H P + E YL L+AV
Sbjct: 99 VVLQPGKSKLFYDGNPVVFGGAVQ------------------GKLVGWGLYNSDSMYRVRMLWLESMDGKSDDEKDFTMFNIIKKRLTNAAAIRSALSLPDEETNAYRLINGEGDRLSGVAIDVYSNWVVISSSARWVEIHKDVIMEAVKAVV-PVTSEVVWRQSIDRLRQDGFDIPTRASRSNADEELQEEDLDKDEISEPAGKQESAESTIISEYGVKFVVSPKLGQKTGHYLDQRDNRYVLGKLCKGKSVLDTFCYSGGFSLHAALNGATRVDAVDSSDAALKLAKLWRFRHQQLADSWCRMNAELNGVAEVVSLHKADVGDFLTEQVGKGCQ--WDVVILDPPKLAPSRKDLERAKTKYKKLNKAAMQTVKPGGLLLSCTCSAAMAQS-GELIDVIKTCASELGRQVTLLKVLGAGGDHTILPAFPEGQYLCGYLIAVL 519
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|1040863409|ref|XP_017242195.1| (PREDICTED: ribosomal RNA large subunit methyltransferase I [Daucus carota subsp. sativus]) HSP 1 Score: 289.271 bits (739), Expect = 4.441e-89 Identity = 177/429 (41.26%), Postives = 246/429 (57.34%), Query Frame = 0
Query: 89 EPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHV--ADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREK-GEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLG--PAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEG-HATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
E A+ + VVL+ GK ++F EG+P+VY AV ++G GD V V D IG G YNS SM+ VR++ E G+ L A ++E +V RR+ A R+ LGLP+ T +RLVN EGD+LSGL D+F V V++SS+ W E++K I E +G A + WRRS LK++G L ++V+ A E V E G+ Y + E GQKTGFY DQR+NRQ I+++S G+RVLD+ CYTGGFALNAA G A GVDSS+ A+E A +N N L+ +F K D ++ +D E +DIVI DPPKLAP ++ L A Y +N ++ GGL++T +CS A+TQ +F ++ AA GR IT+++ + AA H P Y E YLT +L+ V
Sbjct: 25 EIASNNHKGTAKVVLKKGKTQIFREGSPMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGLYNSVSMFCVRIMQLEEEAIGDPLCALNMEKLVERRIDAAVKLRKNLGLPSKNTNTYRLVNSEGDRLSGLIIDIFGDVAVIASSAAWVEKYKPQI----EGCIGRLDAITNICWRRSTEILKEEGI-----DLSNLVEVQPSASTESVKVV--ENGISYVISLE-GQKTGFYADQRENRQFIRNISEGQRVLDMCCYTGGFALNAASGNATSVTGVDSSSPALELANQNIALNHLDTRRISFLKQDATLFMKDALSRNE-LWDIVIMDPPKLAPRKKVLQSAAGMYRNLNLLAMKLTKRGGLLMTCSCSGAMTQS-GKFLSVLQGAASMSGRKITVIRQAGAACDHPIDPAYPEGAYLTNILLRVL 439
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|567130940|ref|XP_006392557.1| (hypothetical protein EUTSA_v10011478mg [Eutrema salsugineum] >gi|557089135|gb|ESQ29843.1| hypothetical protein EUTSA_v10011478mg [Eutrema salsugineum]) HSP 1 Score: 288.115 bits (736), Expect = 1.510e-88 Identity = 171/427 (40.05%), Postives = 248/427 (58.08%), Query Frame = 0
Query: 93 RIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVA--DGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKG-EALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAK----EAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLE-GHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
++ VVL+ GK +LF +G+P+VY AV ++G GD V V D N IG G YNS SM+ VRL+ E + A ++E +V R++ A R +LGLP+A T +RLVN EGD+LSGL DVF + VV+SS+ W E+++ + L + G I+ WR S LK+DGF D+ + + + + + + E G+ Y + E GQKTGFY DQR+NR +I ++S GKRVLDL CY+GGFALNAARGGA +G+DSS+ A+E A EN N ++ G F K D + + + + E+ +DIVI DPPKLAP ++ L A Y +N R+ SGGL++T +CS A+TQ +F ++ AA G+ IT+++ + AA H P Y + YL+ +L+ V
Sbjct: 36 KVNSGVAKVVLKKGKTQLFKDGSPMVYSGAVDRIIGKPPPQTGDVVIVADGSENPIGWGLYNSVSMFCVRLMQLQHESTRDPCCALNIEKLVEARITQALELRNSLGLPSATTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAAWLEKYRSQVEACLRSVHGINHIN--WRPSLDVLKEDGF-----------DISSLKQTQSSNLPQRLMVVENGISYAISLE-GQKTGFYTDQRENRHLISTISAGKRVLDLCCYSGGFALNAARGGATSVVGIDSSSPALELARENVILNHMDPGKVVFLKQDSIEFMKG-ALSREETWDIVILDPPKLAPRKKVLQNAAGMYRNLNSLAMRLTRSGGLMMTCSCSGAMTQS-GKFLGILQSAAAMAGKKITVVREAGAASDHPLDPSYPQGQYLSNILLRVL 446
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|551604354|ref|XP_005783654.1| (hypothetical protein EMIHUDRAFT_52931, partial [Emiliania huxleyi CCMP1516] >gi|485636648|gb|EOD31225.1| hypothetical protein EMIHUDRAFT_52931, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 285.419 bits (729), Expect = 4.324e-88 Identity = 189/407 (46.44%), Postives = 246/407 (60.44%), Query Frame = 0
Query: 107 KARLFLEG-NPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTV-WRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAY-VWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAV 510
KAR+F G +PLV+ A+ +V G+ V+V+D G LIG G +N S+YRVR+L A E+ + L S+ +IV RR+ A + R A LP+ TT +RLVN EGD+LSGL DVF V SS+LW E ++ + L L AGI TV WRRS+ RL+ DG+ PE + + +A+ R A V E GLKY V P LGQK+GFYCDQR NR M+ L G+R+LDL+CY+GGF+L AA GA GVDSSA AI A NA N F +SDV + + G ++FD+V+ DPPKLAP+ +DL RA KY +IN V GGL+L+ TCSAA+TQ F M+ +AA GRS+T+L+ S A H P ESNYLTA+LV V
Sbjct: 1 KARMFKNGGHPLVFEGAIKRTE-NVQVGEAVDVLDGAGELIGWGVWNPHSLYRVRMLVPAIER-DQLEHRSISEIVRRRLQAAASRRAACCLPSESTTAYRLVNSEGDRLSGLTVDVFGSTAVAISSALWLELRREAVEVAL---LELAGIETVVWRRSDGRLRTDGWNPPEAS--GTAEGEADGRPAPAPPVTVLENGLKYLVAPVLGQKSGFYCDQRDNRAMLAELCAGRRLLDLYCYSGGFSLAAAAAGATSTHGVDSSAAAIGLAQSNAALNGFGSVCEFSQSDVPAFLKREGVA--ESFDVVVCDPPKLAPSVKDLRRAGRKYRQINSLAMSAVRPGGLLLSCTCSAAMTQS-GGFLPMLHEAATAAGRSLTVLRTSGPACDHTLHPCCPESNYLTAVLVQV 397
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|1139777643|gb|ONI11830.1| (hypothetical protein PRUPE_4G128300 [Prunus persica]) HSP 1 Score: 285.034 bits (728), Expect = 1.136e-87 Identity = 179/419 (42.72%), Postives = 245/419 (58.47%), Query Frame = 0
Query: 100 HVVLRAGKARLFLEGNPLVYGEAVHEVVGHVA--DGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALY-ASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAG-ISTV-WRRSEARLKQDGFVDPEEALR-PAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLE-GHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
VVL+ GK +LF +G+P+VY AV ++G GD V V D IG G YNS SM+ VRL+ E L A ++E ++ R++ A R++LGLP+A T FRLVN EGD+LSGL DVF V V++SS+ W E++K + EAS+G I+ + WR S LK++G R P+I R + E G+ Y + E GQKTGFY DQR+NRQ I ++S G+RVLD+FCY+GGFALNAARGGA IGVDSS A+E A EN N+++ G TF + D + + E ++DIVI DPPKLAP ++ L A Y +N ++ GGL++T +CS A+TQ F +++ AA GR ITIL+ + AA H P Y E YL+ +L+ V
Sbjct: 19 RVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPRSGDIVLVADGAEKPIGWGMYNSVSMFCVRLMQLEEEATRDLSCALNMEKLLETRINEAIELRKSLGLPSASTNAFRLVNSEGDRLSGLIVDVFGDVAVIASSAAWVEKYKPEV----EASVGRIDEINYINWRPSSEVLKEEGLDASNYKERDPSI---CPQRTK-----VTENGIFYAISLE-GQKTGFYADQRENRQFISTISDGQRVLDMFCYSGGFALNAARGGAVNVIGVDSSLPAVELAKENIVLNNMDPGRITFLREDASEFMKGALSRNE-SWDIVILDPPKLAPRKKALQNASGMYRNLNSLAMQLTKRGGLLMTCSCSGAMTQS-GMFLRILQGAASAAGRKITILREAGAACDHPIDPSYPEGKYLSNILLRVL 422 The following BLAST results are available for this feature:
BLAST of EWM24066.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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