EWM24066.1, cds6617 (CDS) Nannochloropsis gaditana

Overview
NameEWM24066.1
Unique Namecds6617
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:132064..133114 +
Alignment locationCM002469.1:133302..133663 +
Alignment locationCM002469.1:133827..133949 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24066.1
Productribosomal rna large subunit methyltransferase i
Orig transcript idgnl|cribi|Naga_100063g20.3891.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:132064..133114 +
CM002469.1supercontigCM002469.1:133302..133663 +
CM002469.1supercontigCM002469.1:133827..133949 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR019614SAM-dep_methyl-trfase
IPR015947PUA-like_domain
IPR002478PUA
Homology
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|585105358|gb|EWM24066.1| (ribosomal rna large subunit methyltransferase i [Nannochloropsis gaditana])

HSP 1 Score: 1053.12 bits (2722), Expect = 0.000e+0
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0
Query:    1 MRRSLFVSALGLTTSLSLLLATRRAAAFALPAIPFFHSSRGWTSVIPVRDQSATARAHKSSRKGGQYSVREGQEHRTSTRPRARETEVEPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
            MRRSLFVSALGLTTSLSLLLATRRAAAFALPAIPFFHSSRGWTSVIPVRDQSATARAHKSSRKGGQYSVREGQEHRTSTRPRARETEVEPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF
Sbjct:    1 MRRSLFVSALGLTTSLSLLLATRRAAAFALPAIPFFHSSRGWTSVIPVRDQSATARAHKSSRKGGQYSVREGQEHRTSTRPRARETEVEPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|922869979|gb|KOO35971.1| (ribosomal RNA large subunit methyltransferase i-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 326.25 bits (835), Expect = 5.494e-103
Identity = 194/449 (43.21%), Postives = 261/449 (58.13%), Query Frame = 0
Query:  101 VVLRAGKARLFLE-GNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYAS-SLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKA------------------------EARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDL-----GKTGEKA-------FDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
            V L+AGKARLF   G+PLV+  AV +V+G    G  V+VVD +  L+G G +N  SMYRVRLL    E   AL A   L  +++ R+  A   R AL LP+ ETT +RL+N EGD+LSGL  DVF    V  +S++W E+  D +++ L A   P     VWRRS+ RL+QDG+  P   +    + ++                         +      V   E+G+KY V P LGQK+GFYCDQR NR+ +  L R KRVLDLFCY+GGF+L+AAR GAR  +GVDSS LA++ A  NA  N  E    F ++DV  + R +     G+ G+ A        D+VI DPPKLAP+ +DLPRA+ KY K N    R +  GGL+L+ TCSAA+TQ    F KM+ +AA + GR++T+L+V+  A  HV  P   ES+YLTA+L  V 
Sbjct:   35 VRLQAGKARLFKNAGHPLVFSGAVDKVLGDPEPGAIVDVVDGKDGLVGWGVFNPHSMYRVRLLATPEEP--ALIAHRDLRKLISHRLEAALKLRAALSLPSPETTAYRLINSEGDRLSGLTVDVFGGTAVAVTSAMWLEQRSDMVVECLRAL--PGITEVVWRRSDGRLQQDGWEVPNAKVEEVEEHQSLTDDSPTAHASAPAHASAPAPAAQPSPPPPLPVLIYESGVKYLVAPVLGQKSGFYCDQRDNRRQLAELCRDKRVLDLFCYSGGFSLSAARAGARRCVGVDSSGLALDLARRNAALNGFEAQCEFIQADVDKFLRAVHLPGGGQEGDVAGASDAREVDVVICDPPKLAPSVKDLPRAIPKYRKFNGLAMRSLRPGGLLLSCTCSAAMTQS-GGFVKMLHEAAWEQGRALTVLRVTGPAADHVIHPACPESSYLTAVLAFVL 478          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|676380505|ref|XP_009033531.1| (hypothetical protein AURANDRAFT_2373, partial [Aureococcus anophagefferens] >gi|323455833|gb|EGB11701.1| hypothetical protein AURANDRAFT_2373, partial [Aureococcus anophagefferens])

HSP 1 Score: 308.531 bits (789), Expect = 4.137e-97
Identity = 190/416 (45.67%), Postives = 243/416 (58.41%), Query Frame = 0
Query:  101 VVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWH--AREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGL-EASLGPAGIS---TVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAV 510
            V L  GK++LF +GNPL++  AV    G    GD V+VVD     +G G YN  SMYRVRLL    A E  EA   ++++ ++      A + R+AL LP A+T  FR VN EGD LSGL  D F  V V   S++W E  +  +   L EA  G  GIS    +WRR+EARL+QDG+           D +A+    G    AKE GL Y+V    GQKTGFYCDQR NR  +  L  GK VLDL+CY+GGFALNAA+ GA EA GVDSSA A++ A  NA AN L+  A F ++DV  +     K  +  +D+V+ DPPKLAP+ + LPRA  KY KIN      V  GGL+LT TCS+A+T     F  +V  AA D GR +T+L+ S AA  H   P + E  YLTA+L+ V
Sbjct:    1 VTLGRGKSKLFRKGNPLIFAGAVSSTAGDPQRGDVVDVVDGANQNVGWGTYNPDSMYRVRLLGRGGAAETNEARVGAAVKALL----GAAASRRRALDLPRADTDVFRFVNSEGDGLSGLTVDAFGDVLVCQISAVWLESRRAVVEAALREAYEGLTGISDARVLWRRAEARLRQDGW-----------DGEADEMASGDRFAAKEGGLAYEV-DVFGQKTGFYCDQRDNRAFLGPLCAGKSVLDLYCYSGGFALNAAKHGATEARGVDSSATAVDLARRNAAANGLDACA-FEEADVSAWL----KASDARYDVVVCDPPKLAPSAKTLPRATRKYQKINALALGAVKRGGLLLTCTCSSAMTT-SGNFLGVVHDAALDAGRQVTVLRTSGAAADHPIHPAFAEGAYLTAVLLHV 394          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|546299915|ref|XP_005710961.1| (unnamed protein product [Chondrus crispus] >gi|507107134|emb|CDF40667.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 297.745 bits (761), Expect = 3.090e-91
Identity = 187/420 (44.52%), Postives = 244/420 (58.10%), Query Frame = 0
Query:  101 VVLRAGKARLFLEG-NPLVYGEAVHEVV---GH-VADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGE---ALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYP---ELGQKTGFYCDQRQNRQMIQSL--SRG--KRVLDLFCYTGGFALNAARGGAR-EAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLT 504
            VVL+ GKA LF +  NP+V+  +V   +   GH ++D D V V +     +G G +N  SM+RVR+L H     E    L      +IVAR +  A A R+A+ LP   T  +R+VNGEGD+LSGL  D      VVSSS+LWCE+HKD II GL A L P+    VWRR+  RL+QDG  D  EA  PA          GA     +  +KY++       GQKTG Y DQR+NR  I++L   RG  KRVLDLFCYTGGFA+NAA G      + +DSS  AIE    NA  N +    TF +SDV+ Y R   +  + +FD+VI DPPK AP  + LPRA HKY  +N A  RMV  GGL+ T +CSAA+TQ+   F +++ +AA  +GR +T+L+   AA  H  +P   ES YLT
Sbjct:  119 VVLKRGKANLFRDQRNPMVFAGSVERHIPLPGHTLSDCDPVAVCNGAYACLGYGFFNPHSMFRVRMLKHVAPSDELDPPLPWDYAAEIVAR-MRNAVALREAIALPGEATNIYRVVNGEGDRLSGLVVDRVADTLVVSSSALWCEKHKDRIIGGLNAVL-PSCADIVWRRNVDRLRQDGLAD--EAEHPA-------PLNGASTSPTDCDVKYELSRFALTRGQKTGHYADQRENRAFIRNLVNQRGGSKRVLDLFCYTGGFAMNAALGSDDCSVVAIDSSGRAIEMGQRNAELNGVSDKITFVQSDVIKYLRS-AEEDQGSFDVVIVDPPKYAPNVKALPRATHKYRSLNLAAMRMVKQGGLLCTCSCSAAMTQNRHLFVEVIREAASSLGREVTLLKTVGAASDHPVTPEMPESEYLT 526          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|966475873|ref|WP_058506606.1| (class I SAM-dependent rRNA methyltransferase [Legionella quinlivanii] >gi|962267612|gb|KTD51642.1| SAM-dependent methyltransferase [Legionella quinlivanii] >gi|1090728920|emb|SEF61667.1| 23S rRNA (cytosine1962-C5)-methyltransferase [Legionella quinlivanii DSM 21216])

HSP 1 Score: 290.041 bits (741), Expect = 5.270e-90
Identity = 166/413 (40.19%), Postives = 242/413 (58.60%), Query Frame = 0
Query:   99 PHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
            P V L   K    L G+P ++ +A+ +  G +  G+ V+V+ H+G  I  G YN  S+YRVR+L ++++    +   S  DI+ RR+  AW  R+AL LPNAET  FRL N EGD LSGL  D F+ VCVVSSS+ W E++++ I + +         S +W      L QDG+   E     +I+++AE           EAG+ ++V     QKTG + DQR+N Q + +L++GKRVLDL+ YTGGFAL+AA+ GA +   +DSS  AI  A  NA  N L+    F + D   Y   L K G+  +DIV+ DPPKL P++++L RA + Y  ++R VF+ ++SG L++T  CS+A++   +EF  +VT  A  VG+   +L VS  A CH     + E NYLTA+L+AV 
Sbjct:    3 PSVHLIESKQTSVLRGHPWIFPKAIAKTKGKLTTGELVDVISHQGEKICTGVYNEHSLYRVRVLDYSKDSD--MNRLSFADIIKRRLHQAWTVRKALNLPNAETNAFRLCNSEGDGLSGLTIDYFNTVCVVSSSAYWVEKNRELITECINEFTQCQ--SLIWLSQAKPLAQDGWPQVE---NKSIELQAEVL---------EAGVLFEVDFSQPQKTGLFLDQRENHQRVAALAKGKRVLDLYTYTGGFALHAAKAGASQVTAIDSSEQAILQASRNAALNQLDS-IEFIEDDARNY---LSKAGD--YDIVVLDPPKLIPSKQNLQRAKNYYRFLHREVFKAMSSGSLLMTCNCSSAIS--AQEFAALVTAQASAVGKEARVLGVSGPASCHPVLSAFPEGNYLTAVLLAVL 391          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|551678914|ref|XP_005842209.1| (hypothetical protein GUITHDRAFT_131479 [Guillardia theta CCMP2712] >gi|428186379|gb|EKX55229.1| hypothetical protein GUITHDRAFT_131479 [Guillardia theta CCMP2712])

HSP 1 Score: 293.123 bits (749), Expect = 1.531e-89
Identity = 177/443 (39.95%), Postives = 249/443 (56.21%), Query Frame = 0
Query:  101 VVLRAGKARLFLEGNPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYAS--SLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAE-------------ARKEGA-YVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAM---------------ENARANDLEGHATFCKSDVLVY-ARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
            VVL+ GK++LF +GNP+V+G AV                   G L+G G YNS SMYRVR+LW     G++      ++ +I+ +R++ A A R AL LP+ ET  +RL+NGEGD+LSG+A DV+    V+SSS+ W E HKD I++ ++A + P     VWR+S  RL+QDGF  P  A R   D + +              ++E A      E G+K+ V P+LGQKTG Y DQR NR ++  L +GK VLD FCY+GGF+L+AA  GA     VDSS  A++ A                 NA  N +    +  K+DV  +    +GK  +  +D+VI DPPKLAP+R+DL RA  KY K+N+A  + V  GGL+L+ TCSAA+ Q   E   ++   A ++GR +T+L+V  A   H   P + E  YL   L+AV 
Sbjct:   99 VVLQPGKSKLFYDGNPVVFGGAVQ------------------GKLVGWGLYNSDSMYRVRMLWLESMDGKSDDEKDFTMFNIIKKRLTNAAAIRSALSLPDEETNAYRLINGEGDRLSGVAIDVYSNWVVISSSARWVEIHKDVIMEAVKAVV-PVTSEVVWRQSIDRLRQDGFDIPTRASRSNADEELQEEDLDKDEISEPAGKQESAESTIISEYGVKFVVSPKLGQKTGHYLDQRDNRYVLGKLCKGKSVLDTFCYSGGFSLHAALNGATRVDAVDSSDAALKLAKLWRFRHQQLADSWCRMNAELNGVAEVVSLHKADVGDFLTEQVGKGCQ--WDVVILDPPKLAPSRKDLERAKTKYKKLNKAAMQTVKPGGLLLSCTCSAAMAQS-GELIDVIKTCASELGRQVTLLKVLGAGGDHTILPAFPEGQYLCGYLIAVL 519          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|1040863409|ref|XP_017242195.1| (PREDICTED: ribosomal RNA large subunit methyltransferase I [Daucus carota subsp. sativus])

HSP 1 Score: 289.271 bits (739), Expect = 4.441e-89
Identity = 177/429 (41.26%), Postives = 246/429 (57.34%), Query Frame = 0
Query:   89 EPAARIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHV--ADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREK-GEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLG--PAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEG-HATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
            E A+   +    VVL+ GK ++F EG+P+VY  AV  ++G      GD V V D     IG G YNS SM+ VR++    E  G+ L A ++E +V RR+  A   R+ LGLP+  T  +RLVN EGD+LSGL  D+F  V V++SS+ W E++K  I    E  +G   A  +  WRRS   LK++G       L   ++V+  A  E   V   E G+ Y +  E GQKTGFY DQR+NRQ I+++S G+RVLD+ CYTGGFALNAA G A    GVDSS+ A+E A +N   N L+    +F K D  ++ +D     E  +DIVI DPPKLAP ++ L  A   Y  +N    ++   GGL++T +CS A+TQ   +F  ++  AA   GR IT+++ + AA  H   P Y E  YLT +L+ V 
Sbjct:   25 EIASNNHKGTAKVVLKKGKTQIFREGSPMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGLYNSVSMFCVRIMQLEEEAIGDPLCALNMEKLVERRIDAAVKLRKNLGLPSKNTNTYRLVNSEGDRLSGLIIDIFGDVAVIASSAAWVEKYKPQI----EGCIGRLDAITNICWRRSTEILKEEGI-----DLSNLVEVQPSASTESVKVV--ENGISYVISLE-GQKTGFYADQRENRQFIRNISEGQRVLDMCCYTGGFALNAASGNATSVTGVDSSSPALELANQNIALNHLDTRRISFLKQDATLFMKDALSRNE-LWDIVIMDPPKLAPRKKVLQSAAGMYRNLNLLAMKLTKRGGLLMTCSCSGAMTQS-GKFLSVLQGAASMSGRKITVIRQAGAACDHPIDPAYPEGAYLTNILLRVL 439          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|567130940|ref|XP_006392557.1| (hypothetical protein EUTSA_v10011478mg [Eutrema salsugineum] >gi|557089135|gb|ESQ29843.1| hypothetical protein EUTSA_v10011478mg [Eutrema salsugineum])

HSP 1 Score: 288.115 bits (736), Expect = 1.510e-88
Identity = 171/427 (40.05%), Postives = 248/427 (58.08%), Query Frame = 0
Query:   93 RIQRDYPHVVLRAGKARLFLEGNPLVYGEAVHEVVGHVA--DGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKG-EALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTVWRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAYVWAK----EAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLE-GHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
            ++      VVL+ GK +LF +G+P+VY  AV  ++G      GD V V D   N IG G YNS SM+ VRL+    E   +   A ++E +V  R++ A   R +LGLP+A T  +RLVN EGD+LSGL  DVF  + VV+SS+ W E+++  +   L +  G   I+  WR S   LK+DGF           D+ +  + + + +  +    E G+ Y +  E GQKTGFY DQR+NR +I ++S GKRVLDL CY+GGFALNAARGGA   +G+DSS+ A+E A EN   N ++ G   F K D + + +    + E+ +DIVI DPPKLAP ++ L  A   Y  +N    R+  SGGL++T +CS A+TQ   +F  ++  AA   G+ IT+++ + AA  H   P Y +  YL+ +L+ V 
Sbjct:   36 KVNSGVAKVVLKKGKTQLFKDGSPMVYSGAVDRIIGKPPPQTGDVVIVADGSENPIGWGLYNSVSMFCVRLMQLQHESTRDPCCALNIEKLVEARITQALELRNSLGLPSATTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAAWLEKYRSQVEACLRSVHGINHIN--WRPSLDVLKEDGF-----------DISSLKQTQSSNLPQRLMVVENGISYAISLE-GQKTGFYTDQRENRHLISTISAGKRVLDLCCYSGGFALNAARGGATSVVGIDSSSPALELARENVILNHMDPGKVVFLKQDSIEFMKG-ALSREETWDIVILDPPKLAPRKKVLQNAAGMYRNLNSLAMRLTRSGGLMMTCSCSGAMTQS-GKFLGILQSAAAMAGKKITVVREAGAASDHPLDPSYPQGQYLSNILLRVL 446          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|551604354|ref|XP_005783654.1| (hypothetical protein EMIHUDRAFT_52931, partial [Emiliania huxleyi CCMP1516] >gi|485636648|gb|EOD31225.1| hypothetical protein EMIHUDRAFT_52931, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 285.419 bits (729), Expect = 4.324e-88
Identity = 189/407 (46.44%), Postives = 246/407 (60.44%), Query Frame = 0
Query:  107 KARLFLEG-NPLVYGEAVHEVVGHVADGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALYASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAGISTV-WRRSEARLKQDGFVDPEEALRPAIDVKAEARKEGAY-VWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLEGHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAV 510
            KAR+F  G +PLV+  A+     +V  G+ V+V+D  G LIG G +N  S+YRVR+L  A E+ + L   S+ +IV RR+  A + R A  LP+  TT +RLVN EGD+LSGL  DVF    V  SS+LW E  ++ +   L   L  AGI TV WRRS+ RL+ DG+  PE +     + +A+ R   A  V   E GLKY V P LGQK+GFYCDQR NR M+  L  G+R+LDL+CY+GGF+L AA  GA    GVDSSA AI  A  NA  N       F +SDV  + +  G    ++FD+V+ DPPKLAP+ +DL RA  KY +IN      V  GGL+L+ TCSAA+TQ    F  M+ +AA   GRS+T+L+ S  A  H   P   ESNYLTA+LV V
Sbjct:    1 KARMFKNGGHPLVFEGAIKRTE-NVQVGEAVDVLDGAGELIGWGVWNPHSLYRVRMLVPAIER-DQLEHRSISEIVRRRLQAAASRRAACCLPSESTTAYRLVNSEGDRLSGLTVDVFGSTAVAISSALWLELRREAVEVAL---LELAGIETVVWRRSDGRLRTDGWNPPEAS--GTAEGEADGRPAPAPPVTVLENGLKYLVAPVLGQKSGFYCDQRDNRAMLAELCAGRRLLDLYCYSGGFSLAAAAAGATSTHGVDSSAAAIGLAQSNAALNGFGSVCEFSQSDVPAFLKREGVA--ESFDVVVCDPPKLAPSVKDLRRAGRKYRQINSLAMSAVRPGGLLLSCTCSAAMTQS-GGFLPMLHEAATAAGRSLTVLRTSGPACDHTLHPCCPESNYLTAVLVQV 397          
BLAST of EWM24066.1 vs. NCBI_GenBank
Match: gi|1139777643|gb|ONI11830.1| (hypothetical protein PRUPE_4G128300 [Prunus persica])

HSP 1 Score: 285.034 bits (728), Expect = 1.136e-87
Identity = 179/419 (42.72%), Postives = 245/419 (58.47%), Query Frame = 0
Query:  100 HVVLRAGKARLFLEGNPLVYGEAVHEVVGHVA--DGDFVEVVDHRGNLIGKGCYNSQSMYRVRLLWHAREKGEALY-ASSLEDIVARRVSTAWATRQALGLPNAETTCFRLVNGEGDKLSGLAADVFDKVCVVSSSSLWCERHKDFIIQGLEASLGPAG-ISTV-WRRSEARLKQDGFVDPEEALR-PAIDVKAEARKEGAYVWAKEAGLKYKVYPELGQKTGFYCDQRQNRQMIQSLSRGKRVLDLFCYTGGFALNAARGGAREAIGVDSSALAIETAMENARANDLE-GHATFCKSDVLVYARDLGKTGEKAFDIVIADPPKLAPTRRDLPRALHKYLKINRAVFRMVASGGLVLTHTCSAALTQDPEEFRKMVTQAAHDVGRSITILQVSHAAPCHVQSPVYGESNYLTAMLVAVF 511
             VVL+ GK +LF +G+P+VY  AV  ++G      GD V V D     IG G YNS SM+ VRL+    E    L  A ++E ++  R++ A   R++LGLP+A T  FRLVN EGD+LSGL  DVF  V V++SS+ W E++K  +    EAS+G    I+ + WR S   LK++G        R P+I      R +       E G+ Y +  E GQKTGFY DQR+NRQ I ++S G+RVLD+FCY+GGFALNAARGGA   IGVDSS  A+E A EN   N+++ G  TF + D   + +      E ++DIVI DPPKLAP ++ L  A   Y  +N    ++   GGL++T +CS A+TQ    F +++  AA   GR ITIL+ + AA  H   P Y E  YL+ +L+ V 
Sbjct:   19 RVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPRSGDIVLVADGAEKPIGWGMYNSVSMFCVRLMQLEEEATRDLSCALNMEKLLETRINEAIELRKSLGLPSASTNAFRLVNSEGDRLSGLIVDVFGDVAVIASSAAWVEKYKPEV----EASVGRIDEINYINWRPSSEVLKEEGLDASNYKERDPSI---CPQRTK-----VTENGIFYAISLE-GQKTGFYADQRENRQFISTISDGQRVLDMFCYSGGFALNAARGGAVNVIGVDSSLPAVELAKENIVLNNMDPGRITFLREDASEFMKGALSRNE-SWDIVILDPPKLAPRKKALQNASGMYRNLNSLAMQLTKRGGLLMTCSCSGAMTQS-GMFLRILQGAASAAGRKITILREAGAACDHPIDPSYPEGKYLSNILLRVL 422          
The following BLAST results are available for this feature:
BLAST of EWM24066.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105358|gb|EWM24066.1|0.000e+0100.00ribosomal rna large subunit methyltransferase i [N... [more]
gi|922869979|gb|KOO35971.1|5.494e-10343.21ribosomal RNA large subunit methyltransferase i-li... [more]
gi|676380505|ref|XP_009033531.1|4.137e-9745.67hypothetical protein AURANDRAFT_2373, partial [Aur... [more]
gi|546299915|ref|XP_005710961.1|3.090e-9144.52unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|966475873|ref|WP_058506606.1|5.270e-9040.19class I SAM-dependent rRNA methyltransferase [Legi... [more]
gi|551678914|ref|XP_005842209.1|1.531e-8939.95hypothetical protein GUITHDRAFT_131479 [Guillardia... [more]
gi|1040863409|ref|XP_017242195.1|4.441e-8941.26PREDICTED: ribosomal RNA large subunit methyltrans... [more]
gi|567130940|ref|XP_006392557.1|1.510e-8840.05hypothetical protein EUTSA_v10011478mg [Eutrema sa... [more]
gi|551604354|ref|XP_005783654.1|4.324e-8846.44hypothetical protein EMIHUDRAFT_52931, partial [Em... [more]
gi|1139777643|gb|ONI11830.1|1.136e-8742.72hypothetical protein PRUPE_4G128300 [Prunus persic... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6633rna6633Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications