EWM24053.1, cds6615 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|585105345|gb|EWM24053.1| (arsenite inducuble rna associated protein aip [Nannochloropsis gaditana]) HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
Query: 1 MEFQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPTRKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRSLQAVGDRRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKGDQLREGGGSGEGLSGCRLA 338
MEFQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPTRKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRSLQAVGDRRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKGDQLREGGGSGEGLSGCRLA
Sbjct: 1 MEFQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPTRKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRSLQAVGDRRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKGDQLREGGGSGEGLSGCRLA 338
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|1040851418|ref|XP_017237224.1| (PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 [Daucus carota subsp. sativus] >gi|1021042523|gb|KZN00304.1| hypothetical protein DCAR_009058 [Daucus carota subsp. sativus]) HSP 1 Score: 151.369 bits (381), Expect = 7.695e-40 Identity = 98/323 (30.34%), Postives = 141/323 (43.65%), Query Frame = 0
Query: 3 FQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPT---RKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRSLQAVGD---RRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKG 319
F DLG HC+V C + DFLPF CDCC+K CLEHR+YS H CP + + CPLC+ + L +DPN+ W+ H + DCDP+ + K+++C V+ C+E L SN+ C C CL+HR+ H+C GP G + N +RK T+++ P K T+T + + S+ G + G+ S++LQ +G+ G A G+IE C ++R + + CP C F DPV LVEHVE H G
Sbjct: 6 FPDLGKHCSVEDCKLIDFLPFTCDCCNKVFCLEHRSYSKHQCPKGNKHDVTVVICPLCAKGVQLNPEEDPNITWESHVNT-DCDPSNYEKVTKKKKCPVRGCRETLTFSNTIKCRDCTVEHCLKHRFGPDHSCPGPKKPDTGFPFMSFL-------------NTSRKEDTRRNKAPISSSSK-----------------WTSTLLKAASSVRASAEAGMTKLGNE------FSQALQ-IGEGSSSNNGNAAASNGQIE--ACPICHVRFASATSLVDHVKKTHEKDSTRPSVMKTTLDICPRCSKGFRDPVALVEHVEKDHAG 288
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|1179518940|ref|XP_020681245.1| (zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Dendrobium catenatum] >gi|1179518942|ref|XP_020681246.1| zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Dendrobium catenatum]) HSP 1 Score: 146.747 bits (369), Expect = 3.989e-38 Identity = 97/320 (30.31%), Postives = 133/320 (41.56%), Query Frame = 0
Query: 3 FQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPT---RKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRSLQAVGDRRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKG 319
F +LG HC+V C + DFLPF CDCC K CL+HR+Y+ H CP+ + + CPLC+ + L +DPN+ W LH DCDP+ + K++RC C+EIL SN+ C C + CLRHR+ H C GP G G + G ++ + SNG+ K S G +S S R +++L D A G +E C + + R V + + + VD CP C F DPV LVEHVE H G
Sbjct: 6 FPNLGKHCSVEDCKLIDFLPFTCDCCDKVFCLQHRSYAKHLCPNANQMDVTVLVCPLCAQGVRLVPNEDPNITWDLHVNG-DCDPSNYQKVTKKKRCPAPGCREILVFSNTIRCKDCTQEHCLRHRFGPDHNCLGPRKPDTGFPFIGVLRSQKGNSTPNQTSNGSSKWSL--------------------------------------GLLNAASSIRASAEASMQRLAIATNQALHKAKDGMAQGSGANGDLVE--SCIHCHARFANVTSLIEHVEKVHESKVKQAPNRVIVD-VCPRCSKAFRDPVLLVEHVEKDHGG 283
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|698777811|ref|XP_009821949.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574124074|gb|ETV89549.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 142.895 bits (359), Expect = 2.584e-37 Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 0
Query: 1 MEFQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPT----RKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHAC 132
M F DLG HC+ C+ DFLPF CDCC CLEHRTY +H+CP+ GRK AI CPLC AT+ LT QD NV+++ H+ + +C+P RK + RC + C+EIL SN+ C CRK+VCLRHR++ H C
Sbjct: 1 MPF-DLGEHCSKPGCHQNDFLPFACDCCAGVFCLEHRTYDAHSCPNAGRKDSRAITCPLCRATIPLTNDQDVNVIFEQHTRAGNCNPESYNDRKKAKARCEAENCREILTASNTMQCPTCRKKVCLRHRFETDHQC 135
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|1173941769|gb|OQR90874.1| (hypothetical protein THRCLA_09176 [Thraustotheca clavata]) HSP 1 Score: 143.665 bits (361), Expect = 3.397e-37 Identity = 70/140 (50.00%), Postives = 85/140 (60.71%), Query Frame = 0
Query: 5 DLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPTR----KAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACA--GPGGR 138
D+G HC+ CN +DFLPF CDCCH CLEHRTY H C H G K AI CPLC T+ LT D N+VW+ H+ + DC P + K + RCA + C+EIL SNS VC C K+VCLRHR++ H C P R
Sbjct: 2 DIGKHCSKPGCNQQDFLPFECDCCHGVFCLEHRTYEDHECVHAGAKDSRAITCPLCRGTIPLTGNMDVNIVWENHARN-DCKPEKYQENKKAKVRCAAETCREILTASNSVVCSTCHKKVCLRHRFETDHQCTRRAPSSR 140
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|698777809|ref|XP_009821948.1| (hypothetical protein H257_00785 [Aphanomyces astaci] >gi|574124073|gb|ETV89548.1| hypothetical protein H257_00785 [Aphanomyces astaci]) HSP 1 Score: 143.28 bits (360), Expect = 7.333e-37 Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 0
Query: 1 MEFQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPT----RKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHAC 132
M F DLG HC+ C+ DFLPF CDCC CLEHRTY +H+CP+ GRK AI CPLC AT+ LT QD NV+++ H+ + +C+P RK + RC + C+EIL SN+ C CRK+VCLRHR++ H C
Sbjct: 1 MPF-DLGEHCSKPGCHQNDFLPFACDCCAGVFCLEHRTYDAHSCPNAGRKDSRAITCPLCRATIPLTNDQDVNVIFEQHTRAGNCNPESYNDRKKAKARCEAENCREILTASNTMQCPTCRKKVCLRHRFETDHQC 135
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|225441795|ref|XP_002283838.1| (PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Vitis vinifera]) HSP 1 Score: 143.28 bits (360), Expect = 8.002e-37 Identity = 99/321 (30.84%), Postives = 137/321 (42.68%), Query Frame = 0
Query: 2 EFQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPT---RKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRSLQAVGDRRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKG 319
EF DLG HC V C DFLPF CD CH+ CLEHR+Y H CP RK + CPLC+ + L +DPNV W+ H + +CDP+ + K+++C V C+EIL SN+ C C CL+HR+ H C GP G NR S K+D++PS +P+ + T+ + N + S+ G + S Q +R +R G++EE C + + V + + + CP C F DPV LVEHVE H G
Sbjct: 5 EFPDLGKHCTVDDCKQIDFLPFTCDRCHQIFCLEHRSYIKHHCPTADRKDVTVVICPLCAKGVRLIPDEDPNVTWETHVNT-ECDPSNYEKATKKKKCPVSGCREILTFSNTLKCRDCTIDHCLKHRFGPDHKCPGPKKPEAAFPFIGLL---------------NR--SKKEDSKPS--------------RAPTSSSKWATSFLNVASNVRASAEAGMTKLTSEFSQAWQTTRDGVGQS--SGSSSGSRVGQVEE--CPQCHAKFSSVTSLVEHVEKVHEKNSNRAAVRKVTIDVCPKCSRGFRDPVSLVEHVERDHGG 289
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|1175852867|ref|XP_020580052.1| (zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Phalaenopsis equestris]) HSP 1 Score: 142.895 bits (359), Expect = 9.472e-37 Identity = 100/320 (31.25%), Postives = 137/320 (42.81%), Query Frame = 0
Query: 3 FQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPT---RKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRSLQAVGDRRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKG 319
F +LG HC+V C + DFLPF CD C K CL+HR+Y+ H CP+ + + CPLC+ ++ L +DPN+ W LH +CDP+ + K++RC V CKEIL SN+ C C + CLRHR+ H C GP G G RN NGN K P+PT N S ++ S + + S+ G R G + +L+ D G +E C R V + + + + + CP C F DPV LVEHVE H G
Sbjct: 6 FPNLGKHCSVEDCKLIDFLPFTCDRCDKVFCLQHRSYAKHTCPNANQTDVTVLICPLCAQSVRLVPNEDPNITWDLHVNG-NCDPSNYQKTTKKKRCPVPGCKEILVFSNTIRCKDCTQEHCLRHRFGPDHNCVGPRKPDTGLLFLGGLR---------RNQNGNSK-------------------PNPTSNGSSKWSSSILNAAS---SIRASAEAGMQRLGI------ATNEALRKAKDGTGQGSSGSGDLVER--CIRCEARFTNVAALIEH--------VEKAHPSRVIVDVCPRCSKAFRDPVLLVEHVEKDHGG 277
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|743760506|ref|XP_010937215.1| (PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Elaeis guineensis] >gi|743760508|ref|XP_010937225.1| PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Elaeis guineensis] >gi|743760510|ref|XP_010937234.1| PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Elaeis guineensis] >gi|743760512|ref|XP_010937242.1| PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 [Elaeis guineensis]) HSP 1 Score: 140.969 bits (354), Expect = 5.016e-36 Identity = 99/321 (30.84%), Postives = 141/321 (43.93%), Query Frame = 0
Query: 2 EFQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPT---RKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRSLQAVGDRRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKG 319
EF DLG HC V C DFLPF CD C+K CLEHR+Y+ H CP+ ++ + CPLC+ + L +DPN+ W+ H DCDP+ + K++RC V CKE+L SN+ C C K CL+HR+ H C GP + G G NR S K+++ P+ N +G + ++ + N + S+ G + D +++LQ D G + G C+ R V + + + +D CP C F DPV LVEHVE H G
Sbjct: 5 EFPDLGKHCNVDDCRQIDFLPFTCDRCNKVFCLEHRSYTKHLCPNANQQDVTVLVCPLCAKGVRLVPNEDPNITWESHVNC-DCDPSNYQKATKKKRCPVPGCKELLTFSNTLRCRDCTKEHCLKHRFGPDHKCPGPKKQDSGFRFVGLL---------------NR--SQKRES--------------PSNNCSNGSSWWGSSLLTAASNLRASAEAGMQKLS------DATTQALQRAKD---GTAPSSSGGALVEQCTQCPARFSTVSALIEHAEKSHQRNTQPVHSRVMID-VCPKCSRGFRDPVLLVEHVERDHGG 283
BLAST of EWM24053.1 vs. NCBI_GenBank
Match: gi|1050575309|ref|XP_017608551.1| (PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 [Gossypium arboreum] >gi|728810095|gb|KHF99440.1| Zinc finger AN1 and C2H2 domain-containing stress-associated 11 -like protein [Gossypium arboreum]) HSP 1 Score: 140.969 bits (354), Expect = 8.219e-36 Identity = 101/324 (31.17%), Postives = 139/324 (42.90%), Query Frame = 0
Query: 2 EFQDLGAHCAVTTCNMRDFLPFLCDCCHKTHCLEHRTYSSHACPHQGRKQQMAIRCPLCSATLALTAAQDPNVVWQLHSGSRDCDPT---RKAKRERCAVKACKEILGPSNSHVCGVCRKRVCLRHRYQDQHACAGPGGRGGGRGIAGWFSNGGGGASNTRNSNGNRKASTKKDARPSVPGEKGRSAPHPTRNSPSGFAPGTTTTTSCNGNGQGSSHGGNGRRGSRDRQPDGASRS---LQAVGDRRRGEGEARGGKIEENGCSNNNLRDRQVVGVGSGYPGATSLAIGSSQAGQQVDGGCPYCHALFHDPVKLVEHVETMHKG 319
+F DLG HC+V C DFLPF CD CH +CLEHR+Y H CP +K + CPLC+ + L +DPN+ W++H + +CDP+ + K+++C V C+E+L SN+ C C CL+HR+ H C GP G G S +RK S K AP S S +A T+ + + S+ G + GS Q +R L + G G++EE C + V + S +D CP C F DPV LVEHVE H G
Sbjct: 5 QFPDLGKHCSVEDCKQIDFLPFTCDRCHLVYCLEHRSYIKHHCPKADKKDVTVVICPLCAKGVRLIPDEDPNITWEMHVNT-ECDPSNYDKVTKKKKCPVPGCREVLTFSNTIKCRDCTLDHCLKHRFGPDHKCPGPKKSDPGFPFMGLLSR-------------SRKES------------KNNQAP---ATSSSKWA---TSFLNAASTVRASAEAGMTKLGSEISQKLQIARDGVGLSSSSGSGSGSSNGNAGQVEE--CPQCGAKFASVTTLVDHVEKVHERNNQSRVFKMSID-VCPKCSKGFRDPVALVEHVERDHGG 293 The following BLAST results are available for this feature:
BLAST of EWM24053.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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