EWM24067.1, cds6614 (CDS) Nannochloropsis gaditana

Overview
NameEWM24067.1
Unique Namecds6614
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:126208..126755 -
Alignment locationCM002469.1:125826..126051 -
Alignment locationCM002469.1:125472..125744 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24067.1
Productgdp-mannose -epimerase
Orig transcript idgnl|cribi|Naga_100063g17.3892.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:126208..126755 -
CM002469.1supercontigCM002469.1:125826..126051 -
CM002469.1supercontigCM002469.1:125472..125744 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0050662coenzyme binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase_N
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|585105359|gb|EWM24067.1| (gdp-mannose -epimerase [Nannochloropsis gaditana])

HSP 1 Score: 726.472 bits (1874), Expect = 0.000e+0
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0
Query:    1 MSGPAPLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQMGVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQEKSNSIPESDSASNGVQVA 348
            MSGPAPLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQMGVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQEKSNSIPESDSASNGVQVA
Sbjct:    1 MSGPAPLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQMGVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQEKSNSIPESDSASNGVQVA 348          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|299473309|emb|CBN77708.1| (nad-dependent epimerase/dehydratase [Ectocarpus siliculosus])

HSP 1 Score: 462.225 bits (1188), Expect = 3.963e-160
Identity = 222/332 (66.87%), Postives = 256/332 (77.11%), Query Frame = 0
Query:   24 SHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQM---------------------------GVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASK 328
            SHLA+RLK +G YVV ADWK NEFM   EFC  F   DLR L NC+ AS GC  VYNLAADMGGMGFIESNQ VL++NNTM+SSN+LEAAR N A+RYFY+STACVYNEDLQLDPSNPGLKE DAWPAKPQ+ YGLEKLYHEEM  AY+ DFP+ +R+AR+HNVYGP GTWKGGREKAPAAFCRKA+ ST+ FE+WGDGEQTRSFM++DDCVEG +RIM  D   +PLNLGTE+M                           GVRGRNSDNTLIRE L W P ++I +GLR+TYFWIK Q+E E+AAG   +Y +S+VVVQTTESL+ L+ K
Sbjct:   49 SHLAKRLKGEGWYVVCADWKANEFMEPKEFCSVFAHTDLRSLPNCVSASVGCEQVYNLAADMGGMGFIESNQCVLLFNNTMISSNILEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEADAWPAKPQDTYGLEKLYHEEMCKAYAADFPIETRMARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGTIRIMEGDY-RLPLNLGTEEMVSMNKFAAIAMGFEGKDLPIRHIPGPEGVRGRNSDNTLIREKLSWAPSVTIAEGLRKTYFWIKDQVEAEKAAGTGNNYDTSEVVVQTTESLEQLSHK 379          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|219117593|ref|XP_002179589.1| (nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408642|gb|EEC48575.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 447.203 bits (1149), Expect = 1.850e-154
Identity = 224/360 (62.22%), Postives = 261/360 (72.50%), Query Frame = 0
Query:    6 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQ---------------------------MGVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQEKSNSIPES 338
            P   GKKV V GG GFIGSH+ARRLK  G YVVV DWKKNEFM   EFCDEF L DLR+LE    A +GC  VYNLAADMGGMGFI SN+SVL +NNT +S N+LEAARRN  + +FYSS+ACVYNE  Q DP+NPGL E DAWPA+PQ++YGLEKLY EEMALAY RDF +  RIARFHN+YGP GTWKGGREKAPAAFCRKA+ STEHFE+WGDG+QTRSF Y+DDCVEGVLR+M SD   +P+NLG+ +                           MGVRGRNS+N LI E LGWEP + I+DGLR TYFWIK QI+ E   G    YS+S++V Q  ++L  L +  EKS +I +S
Sbjct:    9 PAGEGKKVCVGGGAGFIGSHIARRLKAVGYYVVVVDWKKNEFMENSEFCDEFILGDLRKLEVACSACEGCAQVYNLAADMGGMGFIVSNESVLAFNNTAISMNMLEAARRNKVKDFFYSSSACVYNEAKQEDPANPGLIEADAWPARPQDMYGLEKLYAEEMALAYGRDFDMNVRIARFHNIYGPRGTWKGGREKAPAAFCRKAITSTEHFEMWGDGKQTRSFTYIDDCVEGVLRLMFSD-CDVPINLGSTEMVDMIEFAQIALSFEAKKLPIKHIEGPMGVRGRNSNNKLIMEKLGWEPTMQIKDGLRLTYFWIKEQIDAEGGDGAA--YSTSEIVQQVDDTLMQLGN--EKSTAIDQS 363          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|224005665|ref|XP_002291793.1| (dual function enzyme: UDP-glucose 4-epimerase [Thalassiosira pseudonana CCMP1335] >gi|220972312|gb|EED90644.1| dual function enzyme: UDP-glucose 4-epimerase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 444.891 bits (1143), Expect = 1.380e-153
Identity = 219/352 (62.22%), Postives = 256/352 (72.73%), Query Frame = 0
Query:    6 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQM----------------------------GVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQ 329
            P   G KV V GG GFIGSH+A+RLK+ G  V V DWK+NEFM + EFCDEF L DLR+LE  +KA K C  VYNLAADMGGMGFI SN+SVL +NNT +S N+LEAARRN  + +FYSS+ACVYNE  Q DP NPGL E DAWPA+PQ++YGLEKLY EEMALAY RDFPL  RIARFHN+YGP GTWKGGREKAPAAFCRKA+ S + FE+WGDG+QTRSF Y+DDCVEGVLR+  SD   +P+N+G+ +M                            GVRGRNS+N LI E LGWEP   I DGLR+TYFWIKG+IEKE AAG   DYS S+VV Q  +SL  L +++
Sbjct:   10 PAGNGAKVCVGGGAGFIGSHIAKRLKEAGYKVTVVDWKENEFMEKDEFCDEFILDDLRKLEVAVKACKDCLQVYNLAADMGGMGFICSNESVLSFNNTSISMNMLEAARRNKCKDFFYSSSACVYNEAKQEDPENPGLIESDAWPARPQDMYGLEKLYAEEMALAYGRDFPLNIRIARFHNIYGPRGTWKGGREKAPAAFCRKAITSEKEFEIWGDGKQTRSFTYIDDCVEGVLRLTFSD-CDVPINMGSTEMIDMNDFAKTALSYENKEHLPLKHIEGPMGVRGRNSNNALILEKLGWEPTTKIVDGLRKTYFWIKGEIEKEVAAGSTLDYSKSEVVQQVDDSLMQLGNEE 360          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|545702197|ref|XP_005703429.1| (GDP-D-mannose-3',5'-epimerase [Galdieria sulphuraria] >gi|452819858|gb|EME26909.1| GDP-D-mannose-3',5'-epimerase [Galdieria sulphuraria])

HSP 1 Score: 444.506 bits (1142), Expect = 1.388e-153
Identity = 207/345 (60.00%), Postives = 257/345 (74.49%), Query Frame = 0
Query:   12 KVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQM---------------------------GVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQ 329
            +VLV G GGFIGSHLA++LK+ G YV+ ADWK+NE+  + +FCDEF LVDLREL+NC+KASK C HVYNLAADMGGMGFI+SN SV+++NNTM+S N+LEAARRN  +RYFY+S+AC+Y E+ QLDP NPGLKE DAWPA+PQ+ YGLEKL  EEMA+ Y RDF + +RI RFHN+YGP+GTWKGGREKAPAAFCRK + S   FE+WGDGEQTRSF Y+DD VEGV+R+M SD A  PLN+G+E+M                           GVRGRNS+N L R++LGWEP + + +GL+ TY WIK QIE+E A G   D   +  VV T    D++A+K+
Sbjct:   11 RVLVTGAGGFIGSHLAKKLKEKGQYVIAADWKENEYFKQEDFCDEFLLVDLRELQNCLKASKDCDHVYNLAADMGGMGFIQSNHSVILYNNTMISFNMLEAARRNNVKRYFYASSACIYPENKQLDPKNPGLKESDAWPAQPQDAYGLEKLASEEMAIHYGRDFKMETRIGRFHNIYGPYGTWKGGREKAPAAFCRKCIVSDTEFEMWGDGEQTRSFCYIDDAVEGVIRLMESDFAE-PLNIGSEEMISMNDMAKLIMKFENKELKIKHIPGPEGVRGRNSNNDLCRKVLGWEPKVDLAEGLKRTYIWIKSQIEEESAQGKKNDEYKTSKVVPTHSPTDSVAAKR 354          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|1072233785|gb|OEU18515.1| (putative bifunctional dTDP-glucose 4,6-dehydratase/UDP-glucuronate decarboxylase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 437.187 bits (1123), Expect = 1.326e-150
Identity = 215/351 (61.25%), Postives = 257/351 (73.22%), Query Frame = 0
Query:    6 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQ---------------------------MGVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQ 329
            P   GKKV V GG GFIGSH+A+RLK+ G YV+  DWK NEFM   EFCDEF   DLR+LE    A K C  VYNLAADMGGMGFI SN+SVL +NNT +S N+LEAARRN  + +FYSS+ACVYNE  Q DP+NPGL E DAWPA+PQ++YGLEKLY EEMALAY RDF +  R+ARFHN+YGP GTWKGGREKAPAAFCRKA+ STEHFE+WGDG+QTRSF Y+DDCVEGVLR+M SD A +P+N+G+ +                           MGVRGRNS++ LI E LGWEP I I DGL++TYFWIKG+IEKE   G   +YS+S++V Q  +SL  L +++
Sbjct:   11 PKGEGKKVCVGGGAGFIGSHIAKRLKEAGWYVICVDWKTNEFMKNDEFCDEFIEGDLRKLEVACNACKDCSQVYNLAADMGGMGFIVSNESVLSFNNTAISMNMLEAARRNNVKDFFYSSSACVYNEAKQEDPANPGLIESDAWPARPQDMYGLEKLYSEEMALAYGRDFDINIRLARFHNIYGPCGTWKGGREKAPAAFCRKALTSTEHFEMWGDGKQTRSFTYIDDCVEGVLRLMFSDCA-VPINMGSTEMVDMIEFANIALSFEDKKIPIKHIDGPMGVRGRNSNSKLILEKLGWEPTIKISDGLKKTYFWIKGEIEKE--GGEANEYSTSEIVQQVDDSLMQLGTEK 358          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|1210512752|dbj|GAX28209.1| (GDP-D-mannose 3', 5'-epimerase [Fistulifera solaris])

HSP 1 Score: 433.721 bits (1114), Expect = 3.321e-149
Identity = 216/357 (60.50%), Postives = 258/357 (72.27%), Query Frame = 0
Query:    6 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQ---------------------------MGVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQEKSNSI 335
            P   GKKV V GG GFIGSH+A+RLK  G YVVV DWK+NEFM + EFC+EF L DLR+LE   +A +GC  VYNLAADMGGMGFI SN+SVL +NNT +S N+LE ARR G + +FY+S+ACVYNE  Q DP+NPGL E DAWPA+PQ++YGLEKLY EEMALAY RDF +  RIARFHN+YGP GTWKGGREKAPAAFCRKA+ ST+HFE+WGDG+QTRSF ++DDCVEGVLR+  SD   +P+NLGT +                           MGVRGRNS+N LI E LGWEP I I +GL++TYFWIK QIEKE   G    YS S++V Q  +SL  L    +KS ++
Sbjct:    7 PQGEGKKVCVGGGAGFIGSHIAKRLKTAGYYVVVVDWKENEFMEKDEFCNEFILDDLRKLEVACRACEGCTQVYNLAADMGGMGFIVSNESVLAFNNTAISMNMLEGARRAGVKDFFYASSACVYNEAKQEDPANPGLIESDAWPARPQDMYGLEKLYAEEMALAYGRDFDMNIRIARFHNIYGPRGTWKGGREKAPAAFCRKALTSTDHFEMWGDGKQTRSFTFIDDCVEGVLRLTFSD-CNVPINLGTTEMVDMIEFAKIAMSFEDKNLPIKHIEGPMGVRGRNSNNVLIMEKLGWEPTIKIAEGLKKTYFWIKEQIEKE--GGDATKYSHSEIVQQVDDSLMQLG--HDKSTAV 358          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|1210523831|dbj|GAX17364.1| (GDP-D-mannose 3', 5'-epimerase [Fistulifera solaris])

HSP 1 Score: 432.95 bits (1112), Expect = 7.622e-149
Identity = 216/357 (60.50%), Postives = 258/357 (72.27%), Query Frame = 0
Query:    6 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQ---------------------------MGVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQEKSNSI 335
            P   GKKV V GG GFIGSH+A+RLK  G YVVV DWK+NEFM + EFC+EF L DLR+LE   +A +GC  VYNLAADMGGMGFI SN+SVL +NNT +S N+LE ARR G + +FY+S+ACVYNE  Q DP+NPGL E DAWPA+PQ++YGLEKLY EEMALAY RDF +  RIARFHN+YGP GTWKGGREKAPAAFCRKA+ ST+HFE+WGDG+QTRSF ++DDCVEGVLR+  SD   +P+NLGT +                           MGVRGRNS+N LI E LGWEP I I +GL++TYFWIK QIEKE   G    YS S++V Q  +SL  L    +KS ++
Sbjct:    7 PPGEGKKVCVGGGAGFIGSHIAKRLKAAGYYVVVVDWKENEFMEKDEFCNEFILDDLRKLEVACRACEGCTQVYNLAADMGGMGFIVSNESVLAFNNTAISMNMLEGARRAGVKDFFYASSACVYNEAKQEDPANPGLIESDAWPARPQDMYGLEKLYAEEMALAYGRDFDMNIRIARFHNIYGPRGTWKGGREKAPAAFCRKALTSTDHFEMWGDGKQTRSFTFIDDCVEGVLRLTFSD-CNVPINLGTTEMVDMIEFAKIAMSFEEKNLPIKHIDGPMGVRGRNSNNVLIMEKLGWEPTIKIAEGLKKTYFWIKEQIEKE--GGDATKYSHSEIVQQVDDSLMQLG--HDKSTAV 358          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|496773247|gb|AGL46678.1| (GDP-mannose-3', 5'-epimerase [Gracilaria changii] >gi|496773262|gb|AGL46679.1| GDP-mannose-3', 5'-epimerase [Gracilaria changii])

HSP 1 Score: 430.639 bits (1106), Expect = 3.320e-148
Identity = 207/349 (59.31%), Postives = 260/349 (74.50%), Query Frame = 0
Query:    9 TGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQM---------------------------GVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQE 330
            T K+VLV G GGFIG HLA+RLK +GN+VV ADWK+NE+    EFC EF L+DLR+ ENC+KASK C  +YNLAADMGGMGFI+SN SV+++NN M+S N+LEAAR +G +R++Y+S+AC+Y E  QLDP+NPGLKE DAWPA+PQ+ YGLEKL  EE+A+ Y +DF + +RI RFHN+YGP GTWKGGREKAPAAFCRK++ ST  FE+WGDG QTRSF YVDD VEGV+R+M SD  T PLN+G+++M                           GVRGRNSDNTL +++LGW P I +EDGLR T+ WIK QIE+E+A G+  DYS+S  VV T    D+ ASK++
Sbjct:    4 TKKRVLVTGAGGFIGGHLAKRLKDEGNHVVGADWKENEYFKVEEFCSEFMLLDLRDKENCMKASKDCEDIYNLAADMGGMGFIQSNHSVILYNNAMISFNMLEAARTSGCKRFYYASSACIYPEGAQLDPNNPGLKESDAWPAQPQDAYGLEKLASEELAIHYGKDFGMKTRIGRFHNIYGPQGTWKGGREKAPAAFCRKSITSTTEFEMWGDGNQTRSFCYVDDAVEGVIRLMNSDF-TEPLNIGSDEMISMNDMGKMVLGFAAKDIPIKHIPGPEGVRGRNSDNTLCQKVLGWVPGIKLEDGLRRTFDWIKSQIEEEKAKGIDNDYSTS-TVVGTHAPTDSKASKRK 350          
BLAST of EWM24067.1 vs. NCBI_GenBank
Match: gi|1079708234|gb|AOW44090.1| (GDP-mannose-3,5'-epimerase [Gracilariopsis lemaneiformis])

HSP 1 Score: 426.402 bits (1095), Expect = 8.654e-146
Identity = 206/354 (58.19%), Postives = 262/354 (74.01%), Query Frame = 0
Query:    9 TGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQM---------------------------GVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQEKSNSI 335
            T K+VLV G GGFIG HLA+RLK DGN+VV ADWK+NE+    EFCDEF L+DLR+ +NC+KASK C  +YNLAADMGGMGFI+SN SV+++NN M+S N+LEAAR +G +R++Y+S+AC+Y E  QLDP+NPGLKE DAWPA+PQ+ YGLEKL  EE+A+ Y +DF + +RI RFHN+YGP GTWKGGREKAPAAFCRKA+ S   FE+WGDG QTRSF YVDD VEGV+R+M SD  T PLN+G+++M                           GVRGRNS+N L +++LGW P I +EDGLR T+ WIK QIE+E+A G+  DY++S  VV T    D+ ASK++ S+ +
Sbjct:    4 TKKRVLVTGAGGFIGGHLAKRLKDDGNHVVGADWKENEYFKVEEFCDEFMLLDLRDKDNCMKASKDCEDIYNLAADMGGMGFIQSNHSVILYNNAMISFNMLEAARTSGCKRFYYASSACIYPEGAQLDPNNPGLKESDAWPAQPQDAYGLEKLASEELAIHYGKDFGMKTRIGRFHNIYGPQGTWKGGREKAPAAFCRKAITSATEFEMWGDGNQTRSFCYVDDAVEGVIRLMNSDF-TEPLNVGSDEMISMNDMGKMVLGFAAKDIPIKHIPGPEGVRGRNSNNELCQKVLGWAPGIKLEDGLRRTFDWIKTQIEEEKAKGIENDYATS-TVVGTHAPTDSKASKRKFSSML 355          
The following BLAST results are available for this feature:
BLAST of EWM24067.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105359|gb|EWM24067.1|0.000e+0100.00gdp-mannose -epimerase [Nannochloropsis gaditana][more]
gi|299473309|emb|CBN77708.1|3.963e-16066.87nad-dependent epimerase/dehydratase [Ectocarpus si... [more]
gi|219117593|ref|XP_002179589.1|1.850e-15462.22nad-dependent epimerase/dehydratase [Phaeodactylum... [more]
gi|224005665|ref|XP_002291793.1|1.380e-15362.22dual function enzyme: UDP-glucose 4-epimerase [Tha... [more]
gi|545702197|ref|XP_005703429.1|1.388e-15360.00GDP-D-mannose-3',5'-epimerase [Galdieria sulphurar... [more]
gi|1072233785|gb|OEU18515.1|1.326e-15061.25putative bifunctional dTDP-glucose 4,6-dehydratase... [more]
gi|1210512752|dbj|GAX28209.1|3.321e-14960.50GDP-D-mannose 3', 5'-epimerase [Fistulifera solari... [more]
gi|1210523831|dbj|GAX17364.1|7.622e-14960.50GDP-D-mannose 3', 5'-epimerase [Fistulifera solari... [more]
gi|496773247|gb|AGL46678.1|3.320e-14859.31GDP-mannose-3', 5'-epimerase [Gracilaria changii] ... [more]
gi|1079708234|gb|AOW44090.1|8.654e-14658.19GDP-mannose-3,5'-epimerase [Gracilariopsis lemanei... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6630rna6630Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications