EWM24076.1, cds6613 (CDS) Nannochloropsis gaditana

Overview
NameEWM24076.1
Unique Namecds6613
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:123733..125010 +

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Properties
Property NameValue
Protein idEWM24076.1
ProductRna-dependent RNA polymerase
Orig transcript idgnl|cribi|Naga_100063g28.3901.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:123733..125010 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003723RNA binding
Homology
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BLAST of EWM24076.1 vs. NCBI_GenBank
Match: gi|585105368|gb|EWM24076.1| (Rna-dependent RNA polymerase [Nannochloropsis gaditana])

HSP 1 Score: 879.782 bits (2272), Expect = 0.000e+0
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 0 
Query:    1 MDGDTYFVCMHEKIVEFACPIEDNGAPEKDTNICTKERHGKSKSDNEIFLSNQPDIPASKTIPPCPGAELLTQIGPFRLDPETVGHKIDAKVMRRCLESCVAQAKASQILASASDWWIRHADIRGALSRDCRILGEIAVGAVNSAKTGELWSLPRVLRPQHYPPYLNRYSAVDATSPSRPISADSFLGRVYSRVLPLFLETSRQKSASLRSDDVGNTVAPLDPIKLDVDLRIEGSAAFFELAQSWLKAYRQSLARRARRSSRSTWRHHEKEQQRSQCDHNCQYQASKADILFPFQKLLGAVAAARADKTNLTFTHAVLDRRGQARARQPLQALAANVRSDDSSKIASQVPAARSRNDSITDIQNENCTLETRRLAMASAIYEVTYMGGSILNFVWDLVMPELNQLKKDALARRKDDTIFAKEADS 425
            MDGDTYFVCMHEKIVEFACPIEDNGAPEKDTNICTKERHGKSKSDNEIFLSNQPDIPASKTIPPCPGAELLTQIGPFRLDPETVGHKIDAKVMRRCLESCVAQAKASQILASASDWWIRHADIRGALSRDCRILGEIAVGAVNSAKTGELWSLPRVLRPQHYPPYLNRYSAVDATSPSRPISADSFLGRVYSRVLPLFLETSRQKSASLRSDDVGNTVAPLDPIKLDVDLRIEGSAAFFELAQSWLKAYRQSLARRARRSSRSTWRHHEKEQQRSQCDHNCQYQASKADILFPFQKLLGAVAAARADKTNLTFTHAVLDRRGQARARQPLQALAANVRSDDSSKIASQVPAARSRNDSITDIQNENCTLETRRLAMASAIYEVTYMGGSILNFVWDLVMPELNQLKKDALARRKDDTIFAKEADS
Sbjct:    1 MDGDTYFVCMHEKIVEFACPIEDNGAPEKDTNICTKERHGKSKSDNEIFLSNQPDIPASKTIPPCPGAELLTQIGPFRLDPETVGHKIDAKVMRRCLESCVAQAKASQILASASDWWIRHADIRGALSRDCRILGEIAVGAVNSAKTGELWSLPRVLRPQHYPPYLNRYSAVDATSPSRPISADSFLGRVYSRVLPLFLETSRQKSASLRSDDVGNTVAPLDPIKLDVDLRIEGSAAFFELAQSWLKAYRQSLARRARRSSRSTWRHHEKEQQRSQCDHNCQYQASKADILFPFQKLLGAVAAARADKTNLTFTHAVLDRRGQARARQPLQALAANVRSDDSSKIASQVPAARSRNDSITDIQNENCTLETRRLAMASAIYEVTYMGGSILNFVWDLVMPELNQLKKDALARRKDDTIFAKEADS 425
The following BLAST results are available for this feature:
BLAST of EWM24076.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105368|gb|EWM24076.1|0.000e+0100.00Rna-dependent RNA polymerase [Nannochloropsis gadi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6629rna6629Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications