EWM24070.1, cds6607 (CDS) Nannochloropsis gaditana

Overview
NameEWM24070.1
Unique Namecds6607
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:103939..106302 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24070.1
ProductCCAAT-binding factor
Orig transcript idgnl|cribi|Naga_100063g12.3895.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:103939..106302 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0042254ribosome biogenesis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR027193Noc4
IPR005612CCAAT-binding_factor
Homology
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|585105362|gb|EWM24070.1| (CCAAT-binding factor [Nannochloropsis gaditana])

HSP 1 Score: 1605.11 bits (4155), Expect = 0.000e+0
Identity = 787/787 (100.00%), Postives = 787/787 (100.00%), Query Frame = 0
Query:    1 MRSSKIRKVAEVEVAFPLSSPPPSSASASGTPSSILTTIRDIERGILDGQDLQHLNGLTLLLVHVRALLQSMIGALEEESGAEKVLNNKDREVAGLQSMHALRRIFTALVNRGDVRKPITKDSTTASSPVNAITPDTSLAKTSGALGKGEVLSGASRAQGRKRAGHVEIQEHQNETHAVNAEESLRIFRQWAYRQYATFLSLLLDLVEGKAHDIAHHSSSSSSSSSLTSIKPAFSIKVRIRAAALRTIMEMVKVESVVLHKNYRSFGHELFYRLLMGLLSSSTNSISSRHSHKYGNSDKEEESRKVVDARDLADLLEVLRVDYIEPYCDVRYWLLKGLGIWARKELKEGRCRTSTEQEEASRTETALKLLMMVRLSEEESAMRLLWVSLQDEKGDGALLPNQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKDGARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGLEITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMAGRKRRRKGLEGGQEEGVALAHERKPRSGKLFQAGDVFDGLFVLPSLSAVRKE 787
            MRSSKIRKVAEVEVAFPLSSPPPSSASASGTPSSILTTIRDIERGILDGQDLQHLNGLTLLLVHVRALLQSMIGALEEESGAEKVLNNKDREVAGLQSMHALRRIFTALVNRGDVRKPITKDSTTASSPVNAITPDTSLAKTSGALGKGEVLSGASRAQGRKRAGHVEIQEHQNETHAVNAEESLRIFRQWAYRQYATFLSLLLDLVEGKAHDIAHHSSSSSSSSSLTSIKPAFSIKVRIRAAALRTIMEMVKVESVVLHKNYRSFGHELFYRLLMGLLSSSTNSISSRHSHKYGNSDKEEESRKVVDARDLADLLEVLRVDYIEPYCDVRYWLLKGLGIWARKELKEGRCRTSTEQEEASRTETALKLLMMVRLSEEESAMRLLWVSLQDEKGDGALLPNQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKDGARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGLEITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMAGRKRRRKGLEGGQEEGVALAHERKPRSGKLFQAGDVFDGLFVLPSLSAVRKE
Sbjct:    1 MRSSKIRKVAEVEVAFPLSSPPPSSASASGTPSSILTTIRDIERGILDGQDLQHLNGLTLLLVHVRALLQSMIGALEEESGAEKVLNNKDREVAGLQSMHALRRIFTALVNRGDVRKPITKDSTTASSPVNAITPDTSLAKTSGALGKGEVLSGASRAQGRKRAGHVEIQEHQNETHAVNAEESLRIFRQWAYRQYATFLSLLLDLVEGKAHDIAHHSSSSSSSSSLTSIKPAFSIKVRIRAAALRTIMEMVKVESVVLHKNYRSFGHELFYRLLMGLLSSSTNSISSRHSHKYGNSDKEEESRKVVDARDLADLLEVLRVDYIEPYCDVRYWLLKGLGIWARKELKEGRCRTSTEQEEASRTETALKLLMMVRLSEEESAMRLLWVSLQDEKGDGALLPNQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKDGARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGLEITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMAGRKRRRKGLEGGQEEGVALAHERKPRSGKLFQAGDVFDGLFVLPSLSAVRKE 787          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|298709775|emb|CBJ31577.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 217.624 bits (553), Expect = 4.553e-56
Identity = 131/327 (40.06%), Postives = 188/327 (57.49%), Query Frame = 0
Query:  433 LGKDGARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALL-----------HR----SRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQD----GNNDAQ-MGGIQTSLWEVAALQMHYHHAVASLAKG-LEITTPEDPKKPLSMNMEAMASYTYTELFTLEGK----YWKRGKKEEM 734
            +G +G + R+  +  L  H+KA   AWL CLRLP LPPALYR +   +  +V+ ++P P+ LADF TAAY  GG+ +V+AL+ LF+LMQAH+L+YP FY SLYRL++    ++Y+++RARFFR++ LCL S+ VPA+VVAAFLKR  R +L+AP    +F L+L+  ++  HP CL L+           HR    S AL G    +  +R  P  +  A     +    G  +G   D    G  D +  G + TSLWE+AALQ HYH  VA+LA+G L     ++ +         +A+ TY  LF   G+     W  G  E++
Sbjct:  475 VGAEGKKMRMLAIERLRYHKKAFGDAWLACLRLP-LPPALYRRVLLFLPGNVIPYMPSPVRLADFLTAAYGLGGVRSVLALDALFLLMQAHDLDYPDFYDSLYRLVT--SDMMYAKYRARFFRMVDLCLTSSHVPAYVVAAFLKRFARATLQAPPSGALFTLALVRKLIGRHPECLPLISSRAPAVSDSKHRLLTSSGALSGTTGLK--NRPLPSSDGSATGGAASPPPGGAVDGGAADEYDPGCEDTKGAGAMNTSLWELAALQNHYHPGVATLARGFLREADKKEAEGEAFAGPSKLAAETYQSLFDQAGRDEDDAWTTGDVEDV 796          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|1210524063|dbj|GAX16792.1| (U3 small nucleolar RNA-associated protein 19 [Fistulifera solaris])

HSP 1 Score: 207.223 bits (526), Expect = 1.573e-54
Identity = 157/492 (31.91%), Postives = 240/492 (48.78%), Query Frame = 0
Query:  312 LADLLE------VLRVDYIEPYCDVRYWLLKGLGIWARKELKEGRCRTSTEQEEASRTETALKLLMMVRLSEEESAMRLLWVSLQDEKGDGALL---PNQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKDGARERVPNVASL---------SAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLI-STLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGL----EITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMAGRKRRRKGLEGGQEEGVALAHERKPRSGKLFQAGDVFDGLFVLPS 780
            L D++E      +L+ +++ PY DV+Y+ +  +   A     E   + +  ++ A R E  L++L M++L            S +D    G LL   P     +++  +E    D++       + D E       R ++    ++         S HR A   AWL  L+L DLP    +   + +  +VL H+P PL  +DFF  AY   G+ +V+AL+GLF+L+ AH LEYP+FY  LYRL++P   +LY ++R RFFRLL  CL  + ++P H+VAAF+KRL R +L AP PSV+F L+L + +LR  P    L+HR+      DE +  D FD   +DP  A                          +Q+SLWE+ AL+ HY+ AV++LAK +    E++TP         N++   ++TY  LF  E     R K+++  G+              V L   R P S  LF   DVF GL  +PS
Sbjct:  126 LPDVMEDKTIRNMLQAEFLNPYRDVQYYTMIAIARCAH----ELYGQQTEGKDIAERAERILEILTMMQLP----------TSQKDLDSQGGLLFVPPEDAVPQDDGNDEAEAIDYNDASEDSSDSDSEDEQPAAKRAKISAAKAIKPMFTFQKVSCHRLAWSKAWLAVLKL-DLPLVALKKALRFLPGNVLPHVPHPLRFSDFFMEAYNHNGVVSVLALDGLFLLITAHGLEYPNFYKQLYRLITPS--LLYVKYRTRFFRLLDKCLTRNEMLPTHIVAAFVKRLLRSTLVAPVPSVLFVLALCSNLLRKRPEMACLVHRND-----DEWK--DGFDAETDDPEEA------------------------NALQSSLWELGALERHYYPAVSTLAKSVGREQELSTP-------LYNLDDFLAHTYQSLFEQE-----RNKRKQQKGKT------------TVPLTFVR-PDS--LFAEKDVFHGLLAVPS 542          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|1210527298|dbj|GAX13933.1| (U3 small nucleolar RNA-associated protein 19 [Fistulifera solaris])

HSP 1 Score: 198.364 bits (503), Expect = 2.841e-51
Identity = 153/492 (31.10%), Postives = 233/492 (47.36%), Query Frame = 0
Query:  306 VVDARDLADLLEVLRVDYIEPYCDVRYWLLKGLGIWARKELKEGRCRTSTEQEEASRTETALKLLMMVRLSEEESAMRLLWVSLQDEKGDGALL---PNQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKDGARERVP---------NVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLI-STLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGL----EITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMAGRKRRRKGLEGGQEEGVALAHERKPRSGKLFQAGDVFDGLFVLPS 780
            V D  +   +  +L+ +++ PY DV+Y+ +  +   A     E   +    ++ A R E  L++L M++L            S +D    G LL   P     +++  ++     +        E D E       R ++              +S HR A   AWL  L+L DLPP   +   + +  +VL  +P PL  +DFF  AY  GG+ +V+AL+GLF+L+  H LEYP+FY  LYRL++P   +LY ++R RFFRLL  CL  + ++P HVVAAF+KRL R +L AP PSV+F L+L + +LR       L+HR+      DE +  D FD   +DP  A                          +Q+SLWE+ AL+ HY+ AV++LAK +    E++TP         N++   ++TY  LF  E     R K+++  G+             G       +P S  LF   DVF GL  +PS
Sbjct:  125 VPDVMEDKTIRNMLQAEFLNPYRDVQYYTMIAIARCAH----ELYGKQMEGKDIAERAERILEILTMMQLP----------TSQKDLDSQGGLLFCPPEDAVPKDDSNDDAEAIGFDDASEDSSESDSEDEQPAAKRAKISAAKAIKPMFTFQKVSCHRLAWSKAWLAMLKL-DLPPIALKKALRFLPGNVLPLVPHPLRFSDFFMEAYNHGGVVSVLALDGLFLLITTHGLEYPNFYKQLYRLITPS--LLYVKYRTRFFRLLDKCLTRNEMLPTHVVAAFVKRLLRCTLVAPVPSVLFVLALCSNLLRKRLEMACLVHRND-----DEWK--DGFDAETDDPEEA------------------------NALQSSLWEICALERHYYPAVSTLAKSVGREQELSTP-------LYNLDDFLAHTYQSLFEQE-----RNKRKQQKGK-------------GTVPLTFVRPDS--LFAEKDVFHGLLAVPS 541          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|727135684|emb|CEG81264.1| (hypothetical protein RMATCC62417_15487 [Rhizopus microsporus])

HSP 1 Score: 186.422 bits (472), Expect = 1.145e-48
Identity = 120/339 (35.40%), Postives = 177/339 (52.21%), Query Frame = 0
Query:  401 NQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGK--DGARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAK--GLEITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMA 735
            N   K+ + E++E      GDEG+   +DE+ L +  D  ++R   +  L+ HR+     WL  L+LP L   +Y+ I   + + +L HL  P LL DF T +Y  GG  +++AL GLF L+  HNL+YP FY  LY LL     V++ ++R+RFFRLL L L S  +PA ++AAF+KRL RLSL AP  + +  +  +  +L+ HP+C+ L+H +RA   ID A A         DP   F M             D  +  +   + +SLWEV  L  HY+  V++LAK  G +   P+        N+E    +TY   FT E     R +K+E A
Sbjct:   70 NDNNKKTKSEDDEI----LGDEGLL-SDDEQPLAEENDQKKKRKHPLLQLTVHRRGFSDCWLAFLKLP-LTEEMYKKILLILHKRILPHLAEPKLLMDFLTDSYNVGGAVSLLALNGLFTLIVDHNLDYPDFYKKLYTLLDRN--VMHVKYRSRFFRLLELFLSSAYLPATLIAAFIKRLARLSLTAPPAACVIIIPFIYNLLKRHPTCMCLIHSNRA---IDNAAA---------DP---FTM-------------DNLDPYECKALDSSLWEVKTLTEHYYANVSTLAKIFGEQFLKPK-------YNLEDFLDHTYATFFTTEI---DRKRKKEPA 362          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|1127420357|gb|OLL23452.1| (hypothetical protein NEOLI_001960 [Neolecta irregularis DAH-3])

HSP 1 Score: 189.119 bits (479), Expect = 2.661e-48
Identity = 106/278 (38.13%), Postives = 160/278 (57.55%), Query Frame = 0
Query:  445 VASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGLEITTPEDPKKPLSMNMEAMASYTYTELFTLE 722
            + +LSAH+K  +  WL  LRLP +    Y+S+   V R +  ++ +P LL DF T +Y  GG+T+++AL GLF LMQ +NL+YP+FY  LY L      +++ R+R+RFFRLL L L ST +PA ++A+FLKR+ +L+L AP  ++I  + L   +L+ HPSC++++HR+      +  Q  D FD    DP                        A+ G + +SLWE+A+LQ H++  VA+LAK L     E   KP S NME    ++Y+ +F  E
Sbjct:  245 IQTLSAHKKVFQECWLALLRLP-MTNDQYKSLLLIVHRRIAPYMIKPQLLMDFLTESYDAGGVTSLLALNGLFQLMQKYNLDYPNFYVKLYALFDRN--LMHVRYRSRFFRLLELFLSSTHLPASIIASFLKRMSQLALAAPPGAIISIIPLTYNLLKKHPSCMSMIHRT------NNPQCTDLFDCSENDP------------------------AKTGALDSSLWEMASLQNHFNPNVATLAKILS----EQFTKP-SYNMEDFLDHSYSTMFEAE 484          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|168010245|ref|XP_001757815.1| (predicted protein [Physcomitrella patens] >gi|162691091|gb|EDQ77455.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 190.274 bits (482), Expect = 1.096e-47
Identity = 154/537 (28.68%), Postives = 239/537 (44.51%), Query Frame = 0
Query:  187 IFRQWAYRQYATFLSLLLDLVEGKAHDIAHHSSSSSSSSSLTSIKPAFSIKVRIRAAALRTIMEMVKVESVVLHKNYRSFGHELFYRLLMGLLSSSTNSISSRHSHKYGNSDKEEESRKVVDARDLADLLEVLRVDYIEPYCDVRYWLLKGLGIWARKELKEGRCRTSTEQEEASRTETALKLLMMVRLSEEESAMRLLWV-SLQDEKGDGALLPNQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKDGARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGLEITTPEDPKKPLSMNMEAMASYTYTELFTLE 722
            I+++W + +Y  F++ LL  V       A H++                    ++ AAL TIME+V+VE       Y  F + L+ RL    + S           K  NS                 LL V   DY + Y DV Y+    +     K L +      +  +E        +   +V++ E   A     V S+     D  +L N     +E+  E   W +S     G E+     GK  + E   +  +    R  +  AWL  L+LP  P  +Y+ +   + + V+  L  P+LL+DF T +Y  GGL +V+AL GLF+LM +H LEYP FY  LY LL P   +  ++HRARFF L   CL ST +PA++ AAF K+LGRL+L AP    +  ++++  +LR HPS   L+HR+ +     + +A+   DP +   A                     + A+   +++SLWE+  L+ HY  AV+     LE T      K   +++   +S +YT +FT E
Sbjct:  104 IYKKWIWDRYREFVTTLLRFV-------ARHNAIP-----------------EVQIAALHTIMELVRVEV------YGEFNNHLYLRLCSTFVFS-----------KAFNSG----------------LLSVFVSDYFK-YIDVCYYTYSNMDKITVKRLSQKGSEAISSDDEDDNLRNFTRFANIVQIFEVYGAHTYGGVHSMASNVYD--ILINLPTFSQEDCTEV--WSFSA----GSEDGGTISGKKVSGEVSQHYTNQKKQRTRVSKAWLAFLKLP-FPYEIYKKVLAQLHKRVIPFLSNPVLLSDFLTNSYNVGGLISVMALNGLFILMTSHGLEYPDFYNKLYALLEPS--IFVAKHRARFFELTDTCLKSTHIPAYLAAAFAKKLGRLALSAPPSGALVVIAMIHNLLRRHPSINQLVHRASSASTSSDIEALRGADPFLPFEA---------------------DTAKSNALESSLWEIETLRSHYCPAVSRFVASLE-TDLTVRAKTTEVSISDFSSGSYTTIFTEE 549          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|758352294|dbj|GAN05618.1| (nucleolar complex protein [Mucor ambiguus])

HSP 1 Score: 188.348 bits (477), Expect = 1.194e-47
Identity = 143/493 (29.01%), Postives = 230/493 (46.65%), Query Frame = 0
Query:  271 FYRLLMGLLSSSTNSISSRHSHKYGNSDKEEESRKVVDARDLADLLEVLRVD-YIEPYCDVRYWLLKGLG-----IWARKELKEGRCRTSTEQEEASRTE-----------TALKLLMMVR-LSEEESAMRLLWV---SLQDEKGDGALLPNQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKD-----GARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAK--GLEITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMA 735
            F  L+  + S S N +++  S+ + N+      ++++   +  + L    VD Y+  Y D+R++ LK         + +KE  + +  +   +  A  TE               +L  +R +  E S +   W    S+ D K      PN   K+ +        D  GDEG+  + D E   +D       ++R   +  LS H++     WL  ++LP L   +Y+ I   + + +L HL  P LL DF T +Y  GG  +++AL GLF L+  HNL+YP FY  LY LL     V++ ++R+RFFRLL L L S  +PA ++AAF+KR+ RLSL AP  + +  +  +  +L+ HP+C++L+H ++A                VE+    F M             D  N  +   I++SLWEV  L  HY+  V++LAK  G +   P+        N+E    +TY   FT E     R +K+E A
Sbjct:  122 FTILMNNIKSESENFMNTNGSYHFANNVYGPIVKEIIFNTNFNEHLRKEIVDKYLNVYDDLRHYFLKDAAELMEQAYEKKETAKKQKSSKKAKLSAEDTEDSDDNLGLVANNVFAILESIRTMPTEASEIDEFWTVNPSVYDIK------PNNKSKKTD--------DLLGDEGLLSDSDMEDTEQDQPTATKTKKRKHPLLQLSVHKRGFTDCWLKLMKLP-LSEEMYKKILLILHKRILPHLSEPKLLMDFLTDSYNVGGAVSLLALNGLFTLITEHNLDYPDFYTKLYSLLDRN--VMHVKYRSRFFRLLELFLSSAYLPAALIAAFIKRMARLSLTAPPAASVIIIPFIYNLLKRHPTCMSLIHSNKA----------------VEEATDPFSM-------------DNLNPYECRAIESSLWEVQTLSQHYYANVSTLAKIFGEQFLKPK-------YNLEDFLDHTYATFFTTE---IDRKRKKEPA 558          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|1043304741|gb|OBZ89436.1| (hypothetical protein A0J61_02522 [Choanephora cucurbitarum])

HSP 1 Score: 187.963 bits (476), Expect = 1.937e-47
Identity = 144/489 (29.45%), Postives = 236/489 (48.26%), Query Frame = 0
Query:  274 LLMGLLSSSTNSISSRHSHKYGNSDKEEESRKVVDARDLADLLEVLRVD-YIEPYCDVRYWLLKGLG-----IWARKEL----------KEGRCRTSTEQEEASR--TETALKLLMMVR-LSEEESAMRLLWVSLQDEKGDGALLPNQGGKEEEEEEEETGWDWSGDEGM---GHEEDEEALGKDGARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAK--GLEITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMAGRK 738
            LL  + S S + +++  S+ + N+      + ++ + +  + +    V+ Y+  Y D+R++ LK         + +KE           K+ +   + EQ+E  R      L +L  +R +  E S +   W           + PN    +  ++E++T  D  G EG+      EDE+   +DG + + P +  L  H++     W+  +++P L   +Y+ I   + + +L H+  P LL DF T +Y  GG  +++AL GLF L+  HNL+YP FY  LY LL     V++ ++R+RFFRLL L L S  +PA ++AAF+KRL RLSL AP  + +  +  +  +L+ HP+C+AL+H + A   I E+          EDP   F M             D  N  +   I++SLWEV  L  HY+  V++LAK  G +   P+        N+E    +TY   FT E    KR K+  +A  K
Sbjct:  125 LLANIKSESESVMNNNGSYHFANAVYGPIVKAIITSTNFNEHIRKELVEKYLNVYDDLRHYFLKDAAEIMDQAYQKKETLKKSGNYNSNKKAKLSETEEQQENLRLIASNVLSILEGIRTMPTEASEIDEFWT----------VNPNMYETKAVQQEKQTD-DLLG-EGLLSDSESEDEKDTKRDGKKRKHP-LLQLRVHKRGFTDCWINLMKMP-LTEEMYKRILLILHKRILPHMHEPKLLMDFLTDSYNVGGAVSLLALNGLFTLIVDHNLDYPDFYIKLYSLLDRN--VMHVKYRSRFFRLLELFLSSAYLPAALIAAFIKRLARLSLTAPPAASVIIIPFIYNLLKRHPTCMALIHSNTA---ISES----------EDP---FSM-------------DDMNPYECKAIESSLWEVQTLTQHYYANVSTLAKIFGEQFLKPK-------YNLEDFLDHTYATFFTTEIDR-KRKKEPALAFEK 560          
BLAST of EWM24070.1 vs. NCBI_GenBank
Match: gi|511009435|gb|EPB90678.1| (hypothetical protein HMPREF1544_02422 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 187.193 bits (474), Expect = 3.497e-47
Identity = 142/489 (29.04%), Postives = 226/489 (46.22%), Query Frame = 0
Query:  271 FYRLLMGLLSSSTNSISSRHSHKYGNSDKEEESRKVVDARDLADLLEVLRVD-YIEPYCDVRYWLLKGLG-----IWARKELKEGRCRTSTEQEEASR----------TETALKLLMMVR-LSEEESAMRLLWV---SLQDEKGDGALLPNQGGKEEEEEEEETGWDWSGDEGMGHEEDEEALGKD----GARERVPNVASLSAHRKALEAAWLGCLRLPDLPPALYRSITQHVARHVLEHLPRPLLLADFFTAAYAQGGLTAVIALEGLFVLMQAHNLEYPSFYCSLYRLLSPGPQVLYSRHRARFFRLLRLCLISTLVPAHVVAAFLKRLGRLSLRAPAPSVIFFLSLLTVVLRAHPSCLALLHRSRALKGIDEAQAVDRFDPGVEDPAAAFQMTEFAAGKHEGEDQDGNNDAQMGGIQTSLWEVAALQMHYHHAVASLAKGLEITTPEDPKKPLSMNMEAMASYTYTELFTLEGKYWKRGKKEEMA 735
            F  L+  + S S N +++  S+ + N+      R+++   +  + L    VD Y+  Y D+R++ LK         + +KE  + +  +   +  A                  +L  +R +  E S +   W    S+ D K      P    K+ +        D  GDEG+  + D E   +D      ++R   +  LS H++     WL  ++LP L   +Y+ I   + + +L HL  P LL DF T +Y  GG  +++AL GLF L+  HNL+YP FY  LY LL     V++ ++R+RFFRLL L L S  +PA ++AAF+KR+ RLSL AP  + +  +  +  +L+ HP+C++L+H ++A                V+D    F M             D  N  +   I++SLWEV  L  HY+  V++LAK       E   KP   N+E    +TY   FT E     R +K+E A
Sbjct:  122 FTILMNNIKSESENFMNTNGSYHFANNVYGPIVREIIFNTNFNEHLRKEVVDKYLNVYDDLRHYFLKDAAELMEQAYEKKETAKKQKSSKKTKLSADDKDDGDDLGLVANNVFAILESIRTMPTEASEIDEFWTVNPSVYDAK------PTSKSKKTD--------DLLGDEGLLSDSDMEDAEQDQPATKTKKRKHPLLQLSVHKRGFTDCWLKLMKLP-LSEEMYKKILLILHKRILPHLSEPKLLMDFLTDSYNVGGAVSLLALNGLFTLITEHNLDYPDFYTKLYSLLDRN--VMHVKYRSRFFRLLELFLSSAYLPAALIAAFIKRMARLSLTAPPAASVIIIPFIYNLLKRHPTCMSLIHSNKA----------------VDDATDPFSM-------------DNLNPYECKAIESSLWEVQTLSQHYYANVSTLAKIFS----EQFLKP-KYNLEDFLDHTYATFFTTE---IDRKRKKEPA 556          
The following BLAST results are available for this feature:
BLAST of EWM24070.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105362|gb|EWM24070.1|0.000e+0100.00CCAAT-binding factor [Nannochloropsis gaditana][more]
gi|298709775|emb|CBJ31577.1|4.553e-5640.06conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210524063|dbj|GAX16792.1|1.573e-5431.91U3 small nucleolar RNA-associated protein 19 [Fist... [more]
gi|1210527298|dbj|GAX13933.1|2.841e-5131.10U3 small nucleolar RNA-associated protein 19 [Fist... [more]
gi|727135684|emb|CEG81264.1|1.145e-4835.40hypothetical protein RMATCC62417_15487 [Rhizopus m... [more]
gi|1127420357|gb|OLL23452.1|2.661e-4838.13hypothetical protein NEOLI_001960 [Neolecta irregu... [more]
gi|168010245|ref|XP_001757815.1|1.096e-4728.68predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|758352294|dbj|GAN05618.1|1.194e-4729.01nucleolar complex protein [Mucor ambiguus][more]
gi|1043304741|gb|OBZ89436.1|1.937e-4729.45hypothetical protein A0J61_02522 [Choanephora cucu... [more]
gi|511009435|gb|EPB90678.1|3.497e-4729.04hypothetical protein HMPREF1544_02422 [Mucor circi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6623rna6623Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications