EWM24062.1, cds6604 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24062.1 vs. NCBI_GenBank
Match: gi|585105354|gb|EWM24062.1| (Trypsin Inhibitor-like, cysteine rich domain protein [Nannochloropsis gaditana]) HSP 1 Score: 501.13 bits (1289), Expect = 2.418e-179 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query: 1 MTLKEYLLEYGEEGRRGRKNQKSPGAASIAATDKAGARTTTPAMKTHTTQSLSSMPSPNKVESPVDSTREGAATEGTELSPVPSESAPTKNGLAGMADETKHNVQEVTKRIRKRAAEPGRERGDIDPADLEEIRARAVGDEDEEGVEAEDAAAQVPGNAVEEVRPECPGGMVYSDCGRPCTATCEHLRPVCPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKADGNQEDGANKMSGKALRGARVG 247
MTLKEYLLEYGEEGRRGRKNQKSPGAASIAATDKAGARTTTPAMKTHTTQSLSSMPSPNKVESPVDSTREGAATEGTELSPVPSESAPTKNGLAGMADETKHNVQEVTKRIRKRAAEPGRERGDIDPADLEEIRARAVGDEDEEGVEAEDAAAQVPGNAVEEVRPECPGGMVYSDCGRPCTATCEHLRPVCPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKADGNQEDGANKMSGKALRGARVG
Sbjct: 1 MTLKEYLLEYGEEGRRGRKNQKSPGAASIAATDKAGARTTTPAMKTHTTQSLSSMPSPNKVESPVDSTREGAATEGTELSPVPSESAPTKNGLAGMADETKHNVQEVTKRIRKRAAEPGRERGDIDPADLEEIRARAVGDEDEEGVEAEDAAAQVPGNAVEEVRPECPGGMVYSDCGRPCTATCEHLRPVCPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKADGNQEDGANKMSGKALRGARVG 247
BLAST of EWM24062.1 vs. NCBI_GenBank
Match: gi|585105353|gb|EWM24061.1| (Trypsin Inhibitor-like, cysteine rich domain protein [Nannochloropsis gaditana]) HSP 1 Score: 506.908 bits (1304), Expect = 1.315e-178 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query: 1 MTLKEYLLEYGEEGRRGRKNQKSPGAASIAATDKAGARTTTPAMKTHTTQSLSSMPSPNKVESPVDSTREGAATEGTELSPVPSESAPTKNGLAGMADETKHNVQEVTKRIRKRAAEPGRERGDIDPADLEEIRARAVGDEDEEGVEAEDAAAQVPGNAVEEVRPECPGGMVYSDCGRPCTATCEHLRPVCPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKADGNQEDGANKMSGKALRGARVG 247
MTLKEYLLEYGEEGRRGRKNQKSPGAASIAATDKAGARTTTPAMKTHTTQSLSSMPSPNKVESPVDSTREGAATEGTELSPVPSESAPTKNGLAGMADETKHNVQEVTKRIRKRAAEPGRERGDIDPADLEEIRARAVGDEDEEGVEAEDAAAQVPGNAVEEVRPECPGGMVYSDCGRPCTATCEHLRPVCPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKADGNQEDGANKMSGKALRGARVG
Sbjct: 196 MTLKEYLLEYGEEGRRGRKNQKSPGAASIAATDKAGARTTTPAMKTHTTQSLSSMPSPNKVESPVDSTREGAATEGTELSPVPSESAPTKNGLAGMADETKHNVQEVTKRIRKRAAEPGRERGDIDPADLEEIRARAVGDEDEEGVEAEDAAAQVPGNAVEEVRPECPGGMVYSDCGRPCTATCEHLRPVCPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKADGNQEDGANKMSGKALRGARVG 442
BLAST of EWM24062.1 vs. NCBI_GenBank
Match: gi|919076950|ref|XP_013419579.1| (PREDICTED: balbiani ring protein 3-like [Lingula anatina]) HSP 1 Score: 63.929 bits (154), Expect = 5.428e-8 Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0
Query: 165 PECPGGMVYSDCGRPCTATCEHLRPV--CPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKA 225
P C GG VY +CG C TCE+L + CP +CV +C CP + P+W + C+ E QCR+ A
Sbjct: 810 PVCSGGQVYMECGSSCETTCENLNSLMPCPLICVPKCQCPSELPVWHNKQCILEEQCRVSPLA 872
BLAST of EWM24062.1 vs. NCBI_GenBank
Match: gi|919080875|ref|XP_013421565.1| (PREDICTED: SCO-spondin-like [Lingula anatina]) HSP 1 Score: 57.7658 bits (138), Expect = 7.256e-7 Identity = 32/90 (35.56%), Postives = 43/90 (47.78%), Query Frame = 0
Query: 136 RAVGDEDEEGVEAEDAAAQVPGNAV-----EEVRPECPGGMVYSDCGRPCTATCEHLRPV-CPAVCVARCHCPHDKPIWDGENCLEEAQC 219
R D G + +P N V E VR EC GG V+ CG PCT TC + + C A+C C CP PIW+ +C+++ C
Sbjct: 29 RCTSDSCPPGFKCVSTCVDLPCNKVNKTVCEPVREECTGGRVWKVCGSPCTLTCHTPKDMGCIALCRRGCECPSTAPIWNNGSCIKKEDC 118
BLAST of EWM24062.1 vs. NCBI_GenBank
Match: gi|919047715|ref|XP_013407049.1| (PREDICTED: SCO-spondin-like [Lingula anatina]) HSP 1 Score: 60.077 bits (144), Expect = 8.820e-7 Identity = 29/63 (46.03%), Postives = 38/63 (60.32%), Query Frame = 0
Query: 165 PECPGGMVYSDCGRPCTATCEHLRPV--CPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKA 225
P C GG VY +CG C TCE+L + CP VCV +C CP + P+W + C+ E QCR+ A
Sbjct: 401 PVCSGGQVYMECGSSCETTCENLNSLMPCPLVCVPKCQCPSELPVWHNKQCILEEQCRVSPLA 463 The following BLAST results are available for this feature:
BLAST of EWM24062.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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