EWM24052.1, cds6602 (CDS) Nannochloropsis gaditana

Overview
NameEWM24052.1
Unique Namecds6602
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:94517..94816 +
Alignment locationCM002469.1:95027..95083 +
Alignment locationCM002469.1:95186..95359 +

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Properties
Property NameValue
Protein idEWM24052.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100063g8.3877.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:94517..94816 +
CM002469.1supercontigCM002469.1:95027..95083 +
CM002469.1supercontigCM002469.1:95186..95359 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24052.1 vs. NCBI_GenBank
Match: gi|585105344|gb|EWM24052.1| (hypothetical protein Naga_100063g8 [Nannochloropsis gaditana])

HSP 1 Score: 357.836 bits (917), Expect = 4.665e-125
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 
Query:    1 MLMASQVQSWGKVLPAPTAPLFHAFDAMSLRSHFAYTPVYHVSRIKRLGPPLLRDGGCLTPGTRPFLPVPPQHCLLFLRFCGSILCPCYWRDICAGGCIHLGYLSARYLFLLPFLPLRGCTHVLGDKGEDSRLSTVCRLAERVNLKLDGVGYFLVVDQLDTYVSCYESGRISKYDR 176
            MLMASQVQSWGKVLPAPTAPLFHAFDAMSLRSHFAYTPVYHVSRIKRLGPPLLRDGGCLTPGTRPFLPVPPQHCLLFLRFCGSILCPCYWRDICAGGCIHLGYLSARYLFLLPFLPLRGCTHVLGDKGEDSRLSTVCRLAERVNLKLDGVGYFLVVDQLDTYVSCYESGRISKYDR
Sbjct:    1 MLMASQVQSWGKVLPAPTAPLFHAFDAMSLRSHFAYTPVYHVSRIKRLGPPLLRDGGCLTPGTRPFLPVPPQHCLLFLRFCGSILCPCYWRDICAGGCIHLGYLSARYLFLLPFLPLRGCTHVLGDKGEDSRLSTVCRLAERVNLKLDGVGYFLVVDQLDTYVSCYESGRISKYDR 176
The following BLAST results are available for this feature:
BLAST of EWM24052.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105344|gb|EWM24052.1|4.665e-125100.00hypothetical protein Naga_100063g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6618rna6618Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications