EWM24071.1, cds6600 (CDS) Nannochloropsis gaditana

Overview
NameEWM24071.1
Unique Namecds6600
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:88199..88388 -
Alignment locationCM002469.1:87763..87953 -
Alignment locationCM002469.1:86717..87505 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24071.1
Producttransaminase transferring nitrogenous groups
Orig transcript idgnl|cribi|Naga_100063g5.3896.mrna
GeneOsNAAT1
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:88199..88388 -
CM002469.1supercontigCM002469.1:87763..87953 -
CM002469.1supercontigCM002469.1:86717..87505 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR004839Aminotransferase_I/II
IPR015421PyrdxlP-dep_Trfase_major_sub1
Homology
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|585105363|gb|EWM24071.1| (transaminase transferring nitrogenous groups [Nannochloropsis gaditana])

HSP 1 Score: 788.489 bits (2035), Expect = 0.000e+0
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query:    1 MGQGVEGEKYPESRGIGTQKEAVEDVGKQESRSLHGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIAQAEVVKGRWDPATWLPDVEHLRSLLAASPVKMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARHVSLCASAYVRESNLDVLIFLPTRNRPSLYCITPCLSVSALMRLFHHPHLVPSLPSRPCVRFPGRLLTLVVSILHPPIVLLQSRFFRVDTRVFLLQVLRHGGVAVRVSSLPPGPENGPPFPPRHNPYARGHDFASCGVGGFGSWEKGESHHGEGGGRRSLPVRRMVPSASMLIRALTHPFVHNTNGNAVGSETSGRPNGLP 389
            MGQGVEGEKYPESRGIGTQKEAVEDVGKQESRSLHGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIAQAEVVKGRWDPATWLPDVEHLRSLLAASPVKMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARHVSLCASAYVRESNLDVLIFLPTRNRPSLYCITPCLSVSALMRLFHHPHLVPSLPSRPCVRFPGRLLTLVVSILHPPIVLLQSRFFRVDTRVFLLQVLRHGGVAVRVSSLPPGPENGPPFPPRHNPYARGHDFASCGVGGFGSWEKGESHHGEGGGRRSLPVRRMVPSASMLIRALTHPFVHNTNGNAVGSETSGRPNGLP
Sbjct:    1 MGQGVEGEKYPESRGIGTQKEAVEDVGKQESRSLHGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIAQAEVVKGRWDPATWLPDVEHLRSLLAASPVKMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARHVSLCASAYVRESNLDVLIFLPTRNRPSLYCITPCLSVSALMRLFHHPHLVPSLPSRPCVRFPGRLLTLVVSILHPPIVLLQSRFFRVDTRVFLLQVLRHGGVAVRVSSLPPGPENGPPFPPRHNPYARGHDFASCGVGGFGSWEKGESHHGEGGGRRSLPVRRMVPSASMLIRALTHPFVHNTNGNAVGSETSGRPNGLP 389          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|298713060|emb|CBJ48835.1| (nicotianamide aminotransferase A [Ectocarpus siliculosus])

HSP 1 Score: 185.652 bits (470), Expect = 1.548e-51
Identity = 91/162 (56.17%), Postives = 116/162 (71.60%), Query Frame = 0
Query:   35 HGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIAQAEVVKGRWDPATWLPDVEHLRSLLAASPVKMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARHVSLCASA 196
            H YGP  G   L  AL  KLE EN LD+TGQ+++VT G NQAFA++ALAL DPGDR +L  P+Y +H  A+Q+A   +V+  WD +T LPD+E LR  +    VKMVV+TTPGNP+GAVCP   L+E+A LC +  AWLVVDE+YEHFLH+G RH S C ++
Sbjct:   35 HKYGPALGLPALREALVAKLEEENGLDMTGQEVMVTSGGNQAFAMVALALLDPGDRVLLARPFYCAHQCAVQLAGGTLVECDWDTSTLLPDMEQLRREVQRG-VKMVVITTPGNPSGAVCPRETLEEIARLCGENNAWLVVDEAYEHFLHDGERHFSPCGNS 195          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|545375949|ref|XP_005652101.1| (PLP-dependent transferase [Coccomyxa subellipsoidea C-169] >gi|384254083|gb|EIE27557.1| PLP-dependent transferase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 153.68 bits (387), Expect = 7.626e-39
Identity = 79/162 (48.77%), Postives = 105/162 (64.81%), Query Frame = 0
Query:   31 SRSLHGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIA--QAEVVKGRWDPATWLPDVEHLRSLLAA-SPVKMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARH 189
             RS+  YGP AG   L+ AL  KL  EN  DL   +++VT GANQAF  + L L DPGDR VLF PYYF+HL+A+Q+    A+VV G+ DP TW PD++ L   L+   P KMVVL  P NPTG +     ++  A LC+ AG WL++D +YEHF+++G +H
Sbjct:   81 DRSISAYGPCAGLPALVDALKEKLAAEN--DLPEHEVMVTAGANQAFTNIVLTLLDPGDRIVLFVPYYFNHLMAVQMTGGAADVVHGQCDPQTWHPDLDWLEQELSQPDPPKMVVLVNPCNPTGVLLSRGEVERAAQLCQDAGTWLIMDNTYEHFVYDGRQH 240          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|355755203|gb|AET06149.1| (PLP-dependent aminotransferase [Papaver somniferum])

HSP 1 Score: 149.058 bits (375), Expect = 1.859e-37
Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 0
Query:   20 KEAVEDVGKQESRSLHG-YGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIAQ-AEVVKGRWDPATWLPDVEHLRSLLAASPV-KMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARHVSL 192
            +EA+E V K     L   YG   G   L  ALT+KL+ EN+L      ++VT GANQAF  L LALCD  DR V+FAPYYF+  ++ Q+    +++ G  DP T  PD + L  +L+  PV K+V +  PGNP+G   PE LLK ++ LC+KAG+WLVVD +YE+F+++G +H  +
Sbjct:   46 EEALEKVKKIVDEPLTSRYGGDEGLPALREALTKKLQEENKL--YKSSVMVTAGANQAFVNLVLALCDAEDRVVMFAPYYFNSYMSFQMTGITDILVGPGDPKTLQPDADWLEKVLSTEPVPKLVNIVNPGNPSGTYIPEPLLKRISDLCKKAGSWLVVDNTYEYFMYDGLKHTCI 219          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|702372792|ref|XP_010061963.1| (PREDICTED: uncharacterized protein LOC104449489 [Eucalyptus grandis] >gi|629103541|gb|KCW69010.1| hypothetical protein EUGRSUZ_F02571 [Eucalyptus grandis])

HSP 1 Score: 145.591 bits (366), Expect = 3.413e-36
Identity = 75/163 (46.01%), Postives = 105/163 (64.42%), Query Frame = 0
Query:   33 SLHGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIA-QAEVVKGRWDPATWLPDVEHLRSLLAAS-PV-KMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARHVSL 192
            S+  YG   G  +L AAL +KLE EN+L      ++VT GANQAF  L L LCD GD  V+FAPYYF+  ++ Q+    +++ G  DP T  PD + L   L+ + PV K+V +  PGNP+G   PESLLK ++ LC +AGAWLVVD +YE+F+++G +H  +
Sbjct:   60 SISRYGADEGIPELRAALVKKLERENKL--YKSSVVVTSGANQAFVDLVLTLCDAGDTVVMFAPYYFNAYMSFQMTGVTDILVGPGDPMTLYPDADWLEKTLSETKPVPKLVTVVNPGNPSGTYIPESLLKRISDLCEQAGAWLVVDNTYEYFMYDGLKHTCI 220          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|255639487|gb|ACU20038.1| (unknown [Glycine max])

HSP 1 Score: 140.584 bits (353), Expect = 6.361e-36
Identity = 75/174 (43.10%), Postives = 107/174 (61.49%), Query Frame = 0
Query:   20 KEAVEDVGKQESRSLHG-YGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIA-QAEVVKGRWDPATWLPDVEHLRSLLAAS--PVKMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARH 189
            K+A+E V +  S  L   YG   G  +L AAL +KL  EN  +L    ++VT GANQAF  L L LCDPGD  V+FAPYYF+  ++ Q+     ++ G     T  PD + L  +L+ +  P K+V +  PGNP+G   PE LLK ++ LC+ AG+WLVVD +YE+F+++G +H
Sbjct:   46 KQALEKVKELVSEPLISRYGNDEGIPELRAALVKKLRDEN--NLHKSSVMVTSGANQAFVNLVLTLCDPGDSVVMFAPYYFNAYMSFQMTGVTNILVGPGSSDTLHPDADWLERILSETKPPPKLVTVVNPGNPSGTYIPEPLLKRISDLCKNAGSWLVVDNTYEYFMYDGLKH 217          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|695042592|ref|XP_009408958.1| (PREDICTED: uncharacterized protein LOC103991283 [Musa acuminata subsp. malaccensis] >gi|695042594|ref|XP_009408959.1| PREDICTED: uncharacterized protein LOC103991283 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 144.436 bits (363), Expect = 1.087e-35
Identity = 83/200 (41.50%), Postives = 120/200 (60.00%), Query Frame = 0
Query:    1 MGQGVEGEKYPESRGIGTQKEAVEDVGKQESRSLHGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIA-QAEVVKGRWDPATWLPDVEHLRSLLAASPV-KMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARHVSLCASAYV 198
            + QGV   + PE + +   KE V D       S   YG   G  +L  AL  KL  EN L+ +   ++VT GANQAF  + L LCDPGD  V+FAPYYF+  ++ Q+    +++ G  DP T  PDV  L   L+ +PV K+V +  PGNP+GA  PE +L++++ LC++AGAWLVVD +YE+F+++G +H  +  S  V
Sbjct:   35 LAQGVVYWQPPE-QALEKIKELVWD------PSTSRYGADEGLPELRQALVEKLRRENNLNKSS--VMVTAGANQAFVNIVLTLCDPGDSVVMFAPYYFNAYMSFQMTGVTDILVGPSDPKTLHPDVVWLEETLSQNPVPKLVTVVNPGNPSGAFIPELVLQKISDLCKRAGAWLVVDNTYEYFMYDGLKHFCIEDSHIV 225          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|1108984834|ref|XP_019107621.1| (PREDICTED: uncharacterized protein LOC104904632 [Beta vulgaris subsp. vulgaris] >gi|870848463|gb|KMT00752.1| hypothetical protein BVRB_9g220350 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 143.665 bits (361), Expect = 2.042e-35
Identity = 72/155 (46.45%), Postives = 102/155 (65.81%), Query Frame = 0
Query:   37 YGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIAQ-AEVVKGRWDPATWLPDVEHLRSLLAASPV-KMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARH 189
            YG   G  +L  AL +KL+ EN+L+ +   I+VT GANQAF  L LALCD GD  V+FAPYYF+  ++ Q+   + ++ G  DP T  PD + L   L A+P  K+V +  PGNP+G   PE LLK ++ LCR AG+WL+VD +YE+F+++G +H
Sbjct:   66 YGADEGIPELRDALMQKLQRENKLNKS--KIMVTAGANQAFVNLVLALCDAGDSVVMFAPYYFNAYMSFQMTGVSNILVGPGDPETLYPDADWLEQTLKANPPPKVVTVVNPGNPSGTYVPEPLLKRISDLCRDAGSWLIVDNTYEYFMYDGRKH 218          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|763789684|gb|KJB56680.1| (hypothetical protein B456_009G132000 [Gossypium raimondii])

HSP 1 Score: 140.198 bits (352), Expect = 2.584e-35
Identity = 76/174 (43.68%), Postives = 107/174 (61.49%), Query Frame = 0
Query:   20 KEAVEDVGK-QESRSLHGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIA-QAEVVKGRWDPATWLPDVEHL-RSLLAASPV-KMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARH 189
            K+A++ V    E  S+  YG   G  +L  AL RKL  EN L  +   ++VT GANQAF  L L LCD GD  V+FAPYYF+  ++ Q+    +++ G   P T  PD + L R+LL   PV K+V +  PGNP+G   PE LLK ++ +C+ AG WLVVD +YE+F+++G +H
Sbjct:   46 KQALDKVKALVEEPSVSCYGADEGLPELREALIRKLRQENNLQRSS--VMVTAGANQAFVNLVLTLCDAGDSVVMFAPYYFNAYMSFQMTGVTKILVGPGYPKTLYPDADWLERTLLETKPVPKLVTVVNPGNPSGTYIPEPLLKRISDICKNAGCWLVVDNTYEYFMYDGLKH 217          
BLAST of EWM24071.1 vs. NCBI_GenBank
Match: gi|502147677|ref|XP_004506873.1| (PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [Cicer arietinum])

HSP 1 Score: 143.28 bits (360), Expect = 2.921e-35
Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = 0
Query:   33 SLHGYGPIAGNADLLAALTRKLETENRLDLTGQDILVTGGANQAFALLALALCDPGDRAVLFAPYYFSHLVALQIAQ-AEVVKGRWDPATWLPDVEHLRSLLAAS-PV-KMVVLTTPGNPTGAVCPESLLKEVAALCRKAGAWLVVDESYEHFLHEGARH 189
            S+  YG   G  +L AAL +KL  EN  +L    ++VT GANQAF  L L LCD GD  V+FAPYYF+  ++ Q+     ++ G  +P T  PD + L  +L+ S PV K+V +  PGNPTG   PESLLK +A LC KAG+WLVVD +YE+F+++  +H
Sbjct:   60 SISRYGNDEGIPELRAALVKKLRVEN--NLHKSSVMVTAGANQAFVNLVLTLCDAGDSVVMFAPYYFNAYMSFQMTGITNILVGPGNPETLYPDADWLEKVLSESKPVPKLVTVVNPGNPTGTYIPESLLKRIANLCEKAGSWLVVDNTYEYFMYDDLKH 217          
The following BLAST results are available for this feature:
BLAST of EWM24071.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105363|gb|EWM24071.1|0.000e+0100.00transaminase transferring nitrogenous groups [Nann... [more]
gi|298713060|emb|CBJ48835.1|1.548e-5156.17nicotianamide aminotransferase A [Ectocarpus silic... [more]
gi|545375949|ref|XP_005652101.1|7.626e-3948.77PLP-dependent transferase [Coccomyxa subellipsoide... [more]
gi|355755203|gb|AET06149.1|1.859e-3744.89PLP-dependent aminotransferase [Papaver somniferum... [more]
gi|702372792|ref|XP_010061963.1|3.413e-3646.01PREDICTED: uncharacterized protein LOC104449489 [E... [more]
gi|255639487|gb|ACU20038.1|6.361e-3643.10unknown [Glycine max][more]
gi|695042592|ref|XP_009408958.1|1.087e-3541.50PREDICTED: uncharacterized protein LOC103991283 [M... [more]
gi|1108984834|ref|XP_019107621.1|2.042e-3546.45PREDICTED: uncharacterized protein LOC104904632 [B... [more]
gi|763789684|gb|KJB56680.1|2.584e-3543.68hypothetical protein B456_009G132000 [Gossypium ra... [more]
gi|502147677|ref|XP_004506873.1|2.921e-3546.88PREDICTED: bifunctional aspartate aminotransferase... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6616rna6616Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications